2 # This file is part of the GROMACS molecular simulation package.
4 # Copyright (c) 2010,2011,2012,2013,2014, by the GROMACS development team, led by
5 # Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
6 # and including many others, as listed in the AUTHORS file in the
7 # top-level source directory and at http://www.gromacs.org.
9 # GROMACS is free software; you can redistribute it and/or
10 # modify it under the terms of the GNU Lesser General Public License
11 # as published by the Free Software Foundation; either version 2.1
12 # of the License, or (at your option) any later version.
14 # GROMACS is distributed in the hope that it will be useful,
15 # but WITHOUT ANY WARRANTY; without even the implied warranty of
16 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
17 # Lesser General Public License for more details.
19 # You should have received a copy of the GNU Lesser General Public
20 # License along with GROMACS; if not, see
21 # http://www.gnu.org/licenses, or write to the Free Software Foundation,
22 # Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
24 # If you want to redistribute modifications to GROMACS, please
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28 # derived work must not be called official GROMACS. Details are found
29 # in the README & COPYING files - if they are missing, get the
30 # official version at http://www.gromacs.org.
32 # To help us fund GROMACS development, we humbly ask that you cite
33 # the research papers on the package. Check out http://www.gromacs.org.
35 set(LIBGROMACS_SOURCES)
37 function (gmx_install_headers DESTINATION)
38 if (NOT GMX_BUILD_MDRUN_ONLY)
40 set(DESTINATION ${INCL_INSTALL_DIR}/gromacs/${DESTINATION})
42 set(DESTINATION ${INCL_INSTALL_DIR}/gromacs)
44 install(FILES ${ARGN} DESTINATION ${DESTINATION} COMPONENT development)
49 option(GMX_EXTERNAL_TNG "Use external TNG instead of compiling the version shipped with GROMACS."
51 # Detect TNG if GMX_EXTERNAL_TNG is explicitly ON
53 find_package(TNG_IO 1.6.0)
56 "TNG >= 1.6.0 not found. "
57 "You can set GMX_EXTERNAL_TNG=OFF to compile TNG.")
59 include_directories(${TNG_IO_INCLUDE_DIRS})
61 if(NOT GMX_EXTERNAL_TNG)
62 include(${CMAKE_SOURCE_DIR}/src/external/tng_io/BuildTNG.cmake)
63 tng_get_source_list(TNG_SOURCES TNG_IO_DEFINITIONS)
64 list(APPEND LIBGROMACS_SOURCES ${TNG_SOURCES})
65 tng_set_source_properties(WITH_ZLIB ${HAVE_ZLIB})
68 list(APPEND GMX_EXTRA_LIBRARIES ${ZLIB_LIBRARIES})
69 include_directories(${ZLIB_INCLUDE_DIRS})
73 # We still need to get tng/tng_io_fwd.h from somewhere!
74 include_directories(BEFORE ${CMAKE_SOURCE_DIR}/src/external/tng_io/include)
77 add_subdirectory(gmxlib)
78 add_subdirectory(mdlib)
79 add_subdirectory(gmxpreprocess)
80 add_subdirectory(commandline)
82 add_subdirectory(linearalgebra)
83 add_subdirectory(math)
84 add_subdirectory(random)
85 add_subdirectory(onlinehelp)
86 add_subdirectory(options)
87 add_subdirectory(timing)
88 add_subdirectory(utility)
89 add_subdirectory(fileio)
90 add_subdirectory(swap)
91 add_subdirectory(essentialdynamics)
92 add_subdirectory(pulling)
93 add_subdirectory(simd)
95 if (NOT GMX_BUILD_MDRUN_ONLY)
96 add_subdirectory(legacyheaders)
97 add_subdirectory(gmxana)
98 add_subdirectory(statistics)
99 add_subdirectory(analysisdata)
100 add_subdirectory(selection)
101 add_subdirectory(trajectoryanalysis)
102 add_subdirectory(tools)
105 list(APPEND LIBGROMACS_SOURCES ${GMXLIB_SOURCES} ${MDLIB_SOURCES})
107 # This would be the standard way to include thread_mpi, but
108 # we want libgromacs to link the functions directly
110 # add_subdirectory(thread_mpi)
112 #target_link_libraries(gmx ${GMX_EXTRA_LIBRARIES} ${THREAD_MPI_LIB})
114 tmpi_get_source_list(THREAD_MPI_SOURCES ${CMAKE_SOURCE_DIR}/src/external/thread_mpi/src)
115 list(APPEND LIBGROMACS_SOURCES ${THREAD_MPI_SOURCES})
117 file(GLOB LIBGROMACS_HEADERS *.h)
118 configure_file(version.h.cmakein version.h)
119 gmx_install_headers("" ${LIBGROMACS_HEADERS})
120 gmx_install_headers("" ${CMAKE_CURRENT_BINARY_DIR}/version.h)
122 # Add target that generates baseversion-gen.c every time make is run
123 # if git version info is requested, or create it statically.
124 # This code is here instead of utility/CMakeLists.txt because CMake
125 # ignores set_source_file_properties from subdirectories.
126 set(GENERATED_VERSION_FILE
127 ${CMAKE_CURRENT_BINARY_DIR}/utility/baseversion-gen.c)
128 set(GENERATED_VERSION_FILE_SOURCE
129 ${CMAKE_CURRENT_SOURCE_DIR}/utility/baseversion-gen.c.cmakein)
130 if (GMX_GIT_VERSION_INFO)
131 add_custom_target(gmx-version ALL
132 COMMAND ${CMAKE_COMMAND}
133 -D GIT_EXECUTABLE="${GIT_EXECUTABLE}"
134 -D PROJECT_VERSION="${PROJECT_VERSION}"
135 -D PROJECT_SOURCE_DIR="${PROJECT_SOURCE_DIR}"
136 -D VERSION_CMAKEIN=${GENERATED_VERSION_FILE_SOURCE}
137 -D VERSION_OUT=${GENERATED_VERSION_FILE}
138 -P ${CMAKE_SOURCE_DIR}/cmake/gmxGenerateVersionInfo.cmake
139 WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}
140 DEPENDS ${GENERATED_VERSION_FILE_SOURCE}
141 COMMENT "Generating git version information")
142 set_source_files_properties(${GENERATED_VERSION_FILE}
143 PROPERTIES GENERATED true)
145 set(GMX_PROJECT_VERSION_STR ${PROJECT_VERSION})
146 configure_file(${GENERATED_VERSION_FILE_SOURCE} ${GENERATED_VERSION_FILE})
148 list(APPEND LIBGROMACS_SOURCES ${GENERATED_VERSION_FILE})
150 # apply gcc 4.4.x bug workaround
151 if(GMX_USE_GCC44_BUG_WORKAROUND)
152 include(gmxGCC44O3BugWorkaround)
153 gmx_apply_gcc44_bug_workaround("gmxlib/bondfree.c")
154 gmx_apply_gcc44_bug_workaround("mdlib/force.c")
155 gmx_apply_gcc44_bug_workaround("mdlib/constr.c")
158 add_library(libgromacs ${LIBGROMACS_SOURCES})
159 if (GMX_GIT_VERSION_INFO)
160 add_dependencies(libgromacs gmx-version)
163 # Recent versions of gcc and clang give warnings on scanner.cpp, which
164 # is a generated source file. These are awkward to suppress inline, so
165 # we do it in the compilation command (after testing that the compiler
166 # supports the suppressions). Setting the properties only works after
167 # the related target has been created, e.g. after when the file is
168 # used with add_library().
169 include(CheckCXXCompilerFlag)
170 check_cxx_compiler_flag(-Wno-unused-parameter HAS_NO_UNUSED_PARAMETER)
171 if (HAS_NO_UNUSED_PARAMETER)
172 set(_scanner_cpp_compiler_flags "${_scanner_cpp_compiler_flags} -Wno-unused-parameter")
174 check_cxx_compiler_flag(-Wno-deprecated-register HAS_NO_DEPRECATED_REGISTER)
175 if (HAS_NO_DEPRECATED_REGISTER)
176 set(_scanner_cpp_compiler_flags "${_scanner_cpp_compiler_flags} -Wno-deprecated-register")
178 check_cxx_compiler_flag(-Wno-deprecated HAS_NO_DEPRECATED)
179 if (HAS_NO_DEPRECATED)
180 set(_scanner_cpp_compiler_flags "${_scanner_cpp_compiler_flags} -Wno-deprecated")
183 set_source_files_properties(selection/scanner.cpp PROPERTIES COMPILE_FLAGS "${_scanner_cpp_compiler_flags}")
185 target_link_libraries(libgromacs
188 ${GMX_EXTRA_LIBRARIES}
190 ${FFT_LIBRARIES} ${LINEAR_ALGEBRA_LIBRARIES}
192 ${THREAD_LIB} ${GMX_SHARED_LINKER_FLAGS})
193 set_target_properties(libgromacs PROPERTIES
194 OUTPUT_NAME "gromacs${GMX_LIBS_SUFFIX}"
195 SOVERSION ${LIBRARY_SOVERSION}
196 VERSION ${LIBRARY_VERSION}
197 COMPILE_FLAGS "${OpenMP_C_FLAGS}")
199 # Only install the library in mdrun-only mode if it is actually necessary
201 if (NOT GMX_BUILD_MDRUN_ONLY OR BUILD_SHARED_LIBS)
202 install(TARGETS libgromacs DESTINATION ${LIB_INSTALL_DIR} COMPONENT libraries)
205 if (NOT GMX_BUILD_MDRUN_ONLY)
206 configure_file(${CMAKE_CURRENT_SOURCE_DIR}/libgromacs.pc.cmakein
207 ${CMAKE_CURRENT_BINARY_DIR}/libgromacs.pc @ONLY)
208 install(FILES ${CMAKE_CURRENT_BINARY_DIR}/libgromacs.pc
209 DESTINATION ${LIB_INSTALL_DIR}/pkgconfig
210 RENAME "libgromacs${GMX_LIBS_SUFFIX}.pc"
211 COMPONENT development)
214 if (INSTALL_CUDART_LIB) #can be set manual by user
216 foreach(CUDA_LIB ${CUDA_LIBRARIES})
217 string(REGEX MATCH "cudart" IS_CUDART ${CUDA_LIB})
218 if(IS_CUDART) #libcuda should not be installed
219 #install also name-links (linker uses those)
220 file(GLOB CUDA_LIBS ${CUDA_LIB}*)
221 install(FILES ${CUDA_LIBS} DESTINATION
222 ${LIB_INSTALL_DIR} COMPONENT libraries)
226 message(WARNING "INSTALL_CUDART_LIB only makes sense with GMX_GPU")