Merge "removed group non-boneded call with verlet scheme" into release-4-6
[alexxy/gromacs.git] / src / gmxlib / nonbonded / nb_kernel_sse4_1_single / nb_kernel_ElecCoul_VdwNone_GeomW3W3_sse4_1_single.c
1 /*
2  * Note: this file was generated by the Gromacs sse4_1_single kernel generator.
3  *
4  *                This source code is part of
5  *
6  *                 G   R   O   M   A   C   S
7  *
8  * Copyright (c) 2001-2012, The GROMACS Development Team
9  *
10  * Gromacs is a library for molecular simulation and trajectory analysis,
11  * written by Erik Lindahl, David van der Spoel, Berk Hess, and others - for
12  * a full list of developers and information, check out http://www.gromacs.org
13  *
14  * This program is free software; you can redistribute it and/or modify it under
15  * the terms of the GNU Lesser General Public License as published by the Free
16  * Software Foundation; either version 2 of the License, or (at your option) any
17  * later version.
18  *
19  * To help fund GROMACS development, we humbly ask that you cite
20  * the papers people have written on it - you can find them on the website.
21  */
22 #ifdef HAVE_CONFIG_H
23 #include <config.h>
24 #endif
25
26 #include <math.h>
27
28 #include "../nb_kernel.h"
29 #include "types/simple.h"
30 #include "vec.h"
31 #include "nrnb.h"
32
33 #include "gmx_math_x86_sse4_1_single.h"
34 #include "kernelutil_x86_sse4_1_single.h"
35
36 /*
37  * Gromacs nonbonded kernel:   nb_kernel_ElecCoul_VdwNone_GeomW3W3_VF_sse4_1_single
38  * Electrostatics interaction: Coulomb
39  * VdW interaction:            None
40  * Geometry:                   Water3-Water3
41  * Calculate force/pot:        PotentialAndForce
42  */
43 void
44 nb_kernel_ElecCoul_VdwNone_GeomW3W3_VF_sse4_1_single
45                     (t_nblist * gmx_restrict                nlist,
46                      rvec * gmx_restrict                    xx,
47                      rvec * gmx_restrict                    ff,
48                      t_forcerec * gmx_restrict              fr,
49                      t_mdatoms * gmx_restrict               mdatoms,
50                      nb_kernel_data_t * gmx_restrict        kernel_data,
51                      t_nrnb * gmx_restrict                  nrnb)
52 {
53     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or 
54      * just 0 for non-waters.
55      * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
56      * jnr indices corresponding to data put in the four positions in the SIMD register.
57      */
58     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
59     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
60     int              jnrA,jnrB,jnrC,jnrD;
61     int              jnrlistA,jnrlistB,jnrlistC,jnrlistD;
62     int              j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
63     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
64     real             rcutoff_scalar;
65     real             *shiftvec,*fshift,*x,*f;
66     real             *fjptrA,*fjptrB,*fjptrC,*fjptrD;
67     real             scratch[4*DIM];
68     __m128           tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
69     int              vdwioffset0;
70     __m128           ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
71     int              vdwioffset1;
72     __m128           ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
73     int              vdwioffset2;
74     __m128           ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
75     int              vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
76     __m128           jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
77     int              vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
78     __m128           jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
79     int              vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
80     __m128           jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
81     __m128           dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
82     __m128           dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
83     __m128           dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
84     __m128           dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
85     __m128           dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
86     __m128           dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
87     __m128           dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
88     __m128           dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
89     __m128           dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
90     __m128           velec,felec,velecsum,facel,crf,krf,krf2;
91     real             *charge;
92     __m128           dummy_mask,cutoff_mask;
93     __m128           signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
94     __m128           one     = _mm_set1_ps(1.0);
95     __m128           two     = _mm_set1_ps(2.0);
96     x                = xx[0];
97     f                = ff[0];
98
99     nri              = nlist->nri;
100     iinr             = nlist->iinr;
101     jindex           = nlist->jindex;
102     jjnr             = nlist->jjnr;
103     shiftidx         = nlist->shift;
104     gid              = nlist->gid;
105     shiftvec         = fr->shift_vec[0];
106     fshift           = fr->fshift[0];
107     facel            = _mm_set1_ps(fr->epsfac);
108     charge           = mdatoms->chargeA;
109
110     /* Setup water-specific parameters */
111     inr              = nlist->iinr[0];
112     iq0              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
113     iq1              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
114     iq2              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
115
116     jq0              = _mm_set1_ps(charge[inr+0]);
117     jq1              = _mm_set1_ps(charge[inr+1]);
118     jq2              = _mm_set1_ps(charge[inr+2]);
119     qq00             = _mm_mul_ps(iq0,jq0);
120     qq01             = _mm_mul_ps(iq0,jq1);
121     qq02             = _mm_mul_ps(iq0,jq2);
122     qq10             = _mm_mul_ps(iq1,jq0);
123     qq11             = _mm_mul_ps(iq1,jq1);
124     qq12             = _mm_mul_ps(iq1,jq2);
125     qq20             = _mm_mul_ps(iq2,jq0);
126     qq21             = _mm_mul_ps(iq2,jq1);
127     qq22             = _mm_mul_ps(iq2,jq2);
128
129     /* Avoid stupid compiler warnings */
130     jnrA = jnrB = jnrC = jnrD = 0;
131     j_coord_offsetA = 0;
132     j_coord_offsetB = 0;
133     j_coord_offsetC = 0;
134     j_coord_offsetD = 0;
135
136     outeriter        = 0;
137     inneriter        = 0;
138
139     for(iidx=0;iidx<4*DIM;iidx++)
140     {
141         scratch[iidx] = 0.0;
142     }
143
144     /* Start outer loop over neighborlists */
145     for(iidx=0; iidx<nri; iidx++)
146     {
147         /* Load shift vector for this list */
148         i_shift_offset   = DIM*shiftidx[iidx];
149
150         /* Load limits for loop over neighbors */
151         j_index_start    = jindex[iidx];
152         j_index_end      = jindex[iidx+1];
153
154         /* Get outer coordinate index */
155         inr              = iinr[iidx];
156         i_coord_offset   = DIM*inr;
157
158         /* Load i particle coords and add shift vector */
159         gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
160                                                  &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
161
162         fix0             = _mm_setzero_ps();
163         fiy0             = _mm_setzero_ps();
164         fiz0             = _mm_setzero_ps();
165         fix1             = _mm_setzero_ps();
166         fiy1             = _mm_setzero_ps();
167         fiz1             = _mm_setzero_ps();
168         fix2             = _mm_setzero_ps();
169         fiy2             = _mm_setzero_ps();
170         fiz2             = _mm_setzero_ps();
171
172         /* Reset potential sums */
173         velecsum         = _mm_setzero_ps();
174
175         /* Start inner kernel loop */
176         for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
177         {
178
179             /* Get j neighbor index, and coordinate index */
180             jnrA             = jjnr[jidx];
181             jnrB             = jjnr[jidx+1];
182             jnrC             = jjnr[jidx+2];
183             jnrD             = jjnr[jidx+3];
184             j_coord_offsetA  = DIM*jnrA;
185             j_coord_offsetB  = DIM*jnrB;
186             j_coord_offsetC  = DIM*jnrC;
187             j_coord_offsetD  = DIM*jnrD;
188
189             /* load j atom coordinates */
190             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
191                                               x+j_coord_offsetC,x+j_coord_offsetD,
192                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
193
194             /* Calculate displacement vector */
195             dx00             = _mm_sub_ps(ix0,jx0);
196             dy00             = _mm_sub_ps(iy0,jy0);
197             dz00             = _mm_sub_ps(iz0,jz0);
198             dx01             = _mm_sub_ps(ix0,jx1);
199             dy01             = _mm_sub_ps(iy0,jy1);
200             dz01             = _mm_sub_ps(iz0,jz1);
201             dx02             = _mm_sub_ps(ix0,jx2);
202             dy02             = _mm_sub_ps(iy0,jy2);
203             dz02             = _mm_sub_ps(iz0,jz2);
204             dx10             = _mm_sub_ps(ix1,jx0);
205             dy10             = _mm_sub_ps(iy1,jy0);
206             dz10             = _mm_sub_ps(iz1,jz0);
207             dx11             = _mm_sub_ps(ix1,jx1);
208             dy11             = _mm_sub_ps(iy1,jy1);
209             dz11             = _mm_sub_ps(iz1,jz1);
210             dx12             = _mm_sub_ps(ix1,jx2);
211             dy12             = _mm_sub_ps(iy1,jy2);
212             dz12             = _mm_sub_ps(iz1,jz2);
213             dx20             = _mm_sub_ps(ix2,jx0);
214             dy20             = _mm_sub_ps(iy2,jy0);
215             dz20             = _mm_sub_ps(iz2,jz0);
216             dx21             = _mm_sub_ps(ix2,jx1);
217             dy21             = _mm_sub_ps(iy2,jy1);
218             dz21             = _mm_sub_ps(iz2,jz1);
219             dx22             = _mm_sub_ps(ix2,jx2);
220             dy22             = _mm_sub_ps(iy2,jy2);
221             dz22             = _mm_sub_ps(iz2,jz2);
222
223             /* Calculate squared distance and things based on it */
224             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
225             rsq01            = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
226             rsq02            = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
227             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
228             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
229             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
230             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
231             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
232             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
233
234             rinv00           = gmx_mm_invsqrt_ps(rsq00);
235             rinv01           = gmx_mm_invsqrt_ps(rsq01);
236             rinv02           = gmx_mm_invsqrt_ps(rsq02);
237             rinv10           = gmx_mm_invsqrt_ps(rsq10);
238             rinv11           = gmx_mm_invsqrt_ps(rsq11);
239             rinv12           = gmx_mm_invsqrt_ps(rsq12);
240             rinv20           = gmx_mm_invsqrt_ps(rsq20);
241             rinv21           = gmx_mm_invsqrt_ps(rsq21);
242             rinv22           = gmx_mm_invsqrt_ps(rsq22);
243
244             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
245             rinvsq01         = _mm_mul_ps(rinv01,rinv01);
246             rinvsq02         = _mm_mul_ps(rinv02,rinv02);
247             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
248             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
249             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
250             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
251             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
252             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
253
254             fjx0             = _mm_setzero_ps();
255             fjy0             = _mm_setzero_ps();
256             fjz0             = _mm_setzero_ps();
257             fjx1             = _mm_setzero_ps();
258             fjy1             = _mm_setzero_ps();
259             fjz1             = _mm_setzero_ps();
260             fjx2             = _mm_setzero_ps();
261             fjy2             = _mm_setzero_ps();
262             fjz2             = _mm_setzero_ps();
263
264             /**************************
265              * CALCULATE INTERACTIONS *
266              **************************/
267
268             /* COULOMB ELECTROSTATICS */
269             velec            = _mm_mul_ps(qq00,rinv00);
270             felec            = _mm_mul_ps(velec,rinvsq00);
271
272             /* Update potential sum for this i atom from the interaction with this j atom. */
273             velecsum         = _mm_add_ps(velecsum,velec);
274
275             fscal            = felec;
276
277             /* Calculate temporary vectorial force */
278             tx               = _mm_mul_ps(fscal,dx00);
279             ty               = _mm_mul_ps(fscal,dy00);
280             tz               = _mm_mul_ps(fscal,dz00);
281
282             /* Update vectorial force */
283             fix0             = _mm_add_ps(fix0,tx);
284             fiy0             = _mm_add_ps(fiy0,ty);
285             fiz0             = _mm_add_ps(fiz0,tz);
286
287             fjx0             = _mm_add_ps(fjx0,tx);
288             fjy0             = _mm_add_ps(fjy0,ty);
289             fjz0             = _mm_add_ps(fjz0,tz);
290
291             /**************************
292              * CALCULATE INTERACTIONS *
293              **************************/
294
295             /* COULOMB ELECTROSTATICS */
296             velec            = _mm_mul_ps(qq01,rinv01);
297             felec            = _mm_mul_ps(velec,rinvsq01);
298
299             /* Update potential sum for this i atom from the interaction with this j atom. */
300             velecsum         = _mm_add_ps(velecsum,velec);
301
302             fscal            = felec;
303
304             /* Calculate temporary vectorial force */
305             tx               = _mm_mul_ps(fscal,dx01);
306             ty               = _mm_mul_ps(fscal,dy01);
307             tz               = _mm_mul_ps(fscal,dz01);
308
309             /* Update vectorial force */
310             fix0             = _mm_add_ps(fix0,tx);
311             fiy0             = _mm_add_ps(fiy0,ty);
312             fiz0             = _mm_add_ps(fiz0,tz);
313
314             fjx1             = _mm_add_ps(fjx1,tx);
315             fjy1             = _mm_add_ps(fjy1,ty);
316             fjz1             = _mm_add_ps(fjz1,tz);
317
318             /**************************
319              * CALCULATE INTERACTIONS *
320              **************************/
321
322             /* COULOMB ELECTROSTATICS */
323             velec            = _mm_mul_ps(qq02,rinv02);
324             felec            = _mm_mul_ps(velec,rinvsq02);
325
326             /* Update potential sum for this i atom from the interaction with this j atom. */
327             velecsum         = _mm_add_ps(velecsum,velec);
328
329             fscal            = felec;
330
331             /* Calculate temporary vectorial force */
332             tx               = _mm_mul_ps(fscal,dx02);
333             ty               = _mm_mul_ps(fscal,dy02);
334             tz               = _mm_mul_ps(fscal,dz02);
335
336             /* Update vectorial force */
337             fix0             = _mm_add_ps(fix0,tx);
338             fiy0             = _mm_add_ps(fiy0,ty);
339             fiz0             = _mm_add_ps(fiz0,tz);
340
341             fjx2             = _mm_add_ps(fjx2,tx);
342             fjy2             = _mm_add_ps(fjy2,ty);
343             fjz2             = _mm_add_ps(fjz2,tz);
344
345             /**************************
346              * CALCULATE INTERACTIONS *
347              **************************/
348
349             /* COULOMB ELECTROSTATICS */
350             velec            = _mm_mul_ps(qq10,rinv10);
351             felec            = _mm_mul_ps(velec,rinvsq10);
352
353             /* Update potential sum for this i atom from the interaction with this j atom. */
354             velecsum         = _mm_add_ps(velecsum,velec);
355
356             fscal            = felec;
357
358             /* Calculate temporary vectorial force */
359             tx               = _mm_mul_ps(fscal,dx10);
360             ty               = _mm_mul_ps(fscal,dy10);
361             tz               = _mm_mul_ps(fscal,dz10);
362
363             /* Update vectorial force */
364             fix1             = _mm_add_ps(fix1,tx);
365             fiy1             = _mm_add_ps(fiy1,ty);
366             fiz1             = _mm_add_ps(fiz1,tz);
367
368             fjx0             = _mm_add_ps(fjx0,tx);
369             fjy0             = _mm_add_ps(fjy0,ty);
370             fjz0             = _mm_add_ps(fjz0,tz);
371
372             /**************************
373              * CALCULATE INTERACTIONS *
374              **************************/
375
376             /* COULOMB ELECTROSTATICS */
377             velec            = _mm_mul_ps(qq11,rinv11);
378             felec            = _mm_mul_ps(velec,rinvsq11);
379
380             /* Update potential sum for this i atom from the interaction with this j atom. */
381             velecsum         = _mm_add_ps(velecsum,velec);
382
383             fscal            = felec;
384
385             /* Calculate temporary vectorial force */
386             tx               = _mm_mul_ps(fscal,dx11);
387             ty               = _mm_mul_ps(fscal,dy11);
388             tz               = _mm_mul_ps(fscal,dz11);
389
390             /* Update vectorial force */
391             fix1             = _mm_add_ps(fix1,tx);
392             fiy1             = _mm_add_ps(fiy1,ty);
393             fiz1             = _mm_add_ps(fiz1,tz);
394
395             fjx1             = _mm_add_ps(fjx1,tx);
396             fjy1             = _mm_add_ps(fjy1,ty);
397             fjz1             = _mm_add_ps(fjz1,tz);
398
399             /**************************
400              * CALCULATE INTERACTIONS *
401              **************************/
402
403             /* COULOMB ELECTROSTATICS */
404             velec            = _mm_mul_ps(qq12,rinv12);
405             felec            = _mm_mul_ps(velec,rinvsq12);
406
407             /* Update potential sum for this i atom from the interaction with this j atom. */
408             velecsum         = _mm_add_ps(velecsum,velec);
409
410             fscal            = felec;
411
412             /* Calculate temporary vectorial force */
413             tx               = _mm_mul_ps(fscal,dx12);
414             ty               = _mm_mul_ps(fscal,dy12);
415             tz               = _mm_mul_ps(fscal,dz12);
416
417             /* Update vectorial force */
418             fix1             = _mm_add_ps(fix1,tx);
419             fiy1             = _mm_add_ps(fiy1,ty);
420             fiz1             = _mm_add_ps(fiz1,tz);
421
422             fjx2             = _mm_add_ps(fjx2,tx);
423             fjy2             = _mm_add_ps(fjy2,ty);
424             fjz2             = _mm_add_ps(fjz2,tz);
425
426             /**************************
427              * CALCULATE INTERACTIONS *
428              **************************/
429
430             /* COULOMB ELECTROSTATICS */
431             velec            = _mm_mul_ps(qq20,rinv20);
432             felec            = _mm_mul_ps(velec,rinvsq20);
433
434             /* Update potential sum for this i atom from the interaction with this j atom. */
435             velecsum         = _mm_add_ps(velecsum,velec);
436
437             fscal            = felec;
438
439             /* Calculate temporary vectorial force */
440             tx               = _mm_mul_ps(fscal,dx20);
441             ty               = _mm_mul_ps(fscal,dy20);
442             tz               = _mm_mul_ps(fscal,dz20);
443
444             /* Update vectorial force */
445             fix2             = _mm_add_ps(fix2,tx);
446             fiy2             = _mm_add_ps(fiy2,ty);
447             fiz2             = _mm_add_ps(fiz2,tz);
448
449             fjx0             = _mm_add_ps(fjx0,tx);
450             fjy0             = _mm_add_ps(fjy0,ty);
451             fjz0             = _mm_add_ps(fjz0,tz);
452
453             /**************************
454              * CALCULATE INTERACTIONS *
455              **************************/
456
457             /* COULOMB ELECTROSTATICS */
458             velec            = _mm_mul_ps(qq21,rinv21);
459             felec            = _mm_mul_ps(velec,rinvsq21);
460
461             /* Update potential sum for this i atom from the interaction with this j atom. */
462             velecsum         = _mm_add_ps(velecsum,velec);
463
464             fscal            = felec;
465
466             /* Calculate temporary vectorial force */
467             tx               = _mm_mul_ps(fscal,dx21);
468             ty               = _mm_mul_ps(fscal,dy21);
469             tz               = _mm_mul_ps(fscal,dz21);
470
471             /* Update vectorial force */
472             fix2             = _mm_add_ps(fix2,tx);
473             fiy2             = _mm_add_ps(fiy2,ty);
474             fiz2             = _mm_add_ps(fiz2,tz);
475
476             fjx1             = _mm_add_ps(fjx1,tx);
477             fjy1             = _mm_add_ps(fjy1,ty);
478             fjz1             = _mm_add_ps(fjz1,tz);
479
480             /**************************
481              * CALCULATE INTERACTIONS *
482              **************************/
483
484             /* COULOMB ELECTROSTATICS */
485             velec            = _mm_mul_ps(qq22,rinv22);
486             felec            = _mm_mul_ps(velec,rinvsq22);
487
488             /* Update potential sum for this i atom from the interaction with this j atom. */
489             velecsum         = _mm_add_ps(velecsum,velec);
490
491             fscal            = felec;
492
493             /* Calculate temporary vectorial force */
494             tx               = _mm_mul_ps(fscal,dx22);
495             ty               = _mm_mul_ps(fscal,dy22);
496             tz               = _mm_mul_ps(fscal,dz22);
497
498             /* Update vectorial force */
499             fix2             = _mm_add_ps(fix2,tx);
500             fiy2             = _mm_add_ps(fiy2,ty);
501             fiz2             = _mm_add_ps(fiz2,tz);
502
503             fjx2             = _mm_add_ps(fjx2,tx);
504             fjy2             = _mm_add_ps(fjy2,ty);
505             fjz2             = _mm_add_ps(fjz2,tz);
506
507             fjptrA             = f+j_coord_offsetA;
508             fjptrB             = f+j_coord_offsetB;
509             fjptrC             = f+j_coord_offsetC;
510             fjptrD             = f+j_coord_offsetD;
511
512             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
513                                                    fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
514
515             /* Inner loop uses 252 flops */
516         }
517
518         if(jidx<j_index_end)
519         {
520
521             /* Get j neighbor index, and coordinate index */
522             jnrlistA         = jjnr[jidx];
523             jnrlistB         = jjnr[jidx+1];
524             jnrlistC         = jjnr[jidx+2];
525             jnrlistD         = jjnr[jidx+3];
526             /* Sign of each element will be negative for non-real atoms.
527              * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
528              * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
529              */
530             dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
531             jnrA       = (jnrlistA>=0) ? jnrlistA : 0;
532             jnrB       = (jnrlistB>=0) ? jnrlistB : 0;
533             jnrC       = (jnrlistC>=0) ? jnrlistC : 0;
534             jnrD       = (jnrlistD>=0) ? jnrlistD : 0;
535             j_coord_offsetA  = DIM*jnrA;
536             j_coord_offsetB  = DIM*jnrB;
537             j_coord_offsetC  = DIM*jnrC;
538             j_coord_offsetD  = DIM*jnrD;
539
540             /* load j atom coordinates */
541             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
542                                               x+j_coord_offsetC,x+j_coord_offsetD,
543                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
544
545             /* Calculate displacement vector */
546             dx00             = _mm_sub_ps(ix0,jx0);
547             dy00             = _mm_sub_ps(iy0,jy0);
548             dz00             = _mm_sub_ps(iz0,jz0);
549             dx01             = _mm_sub_ps(ix0,jx1);
550             dy01             = _mm_sub_ps(iy0,jy1);
551             dz01             = _mm_sub_ps(iz0,jz1);
552             dx02             = _mm_sub_ps(ix0,jx2);
553             dy02             = _mm_sub_ps(iy0,jy2);
554             dz02             = _mm_sub_ps(iz0,jz2);
555             dx10             = _mm_sub_ps(ix1,jx0);
556             dy10             = _mm_sub_ps(iy1,jy0);
557             dz10             = _mm_sub_ps(iz1,jz0);
558             dx11             = _mm_sub_ps(ix1,jx1);
559             dy11             = _mm_sub_ps(iy1,jy1);
560             dz11             = _mm_sub_ps(iz1,jz1);
561             dx12             = _mm_sub_ps(ix1,jx2);
562             dy12             = _mm_sub_ps(iy1,jy2);
563             dz12             = _mm_sub_ps(iz1,jz2);
564             dx20             = _mm_sub_ps(ix2,jx0);
565             dy20             = _mm_sub_ps(iy2,jy0);
566             dz20             = _mm_sub_ps(iz2,jz0);
567             dx21             = _mm_sub_ps(ix2,jx1);
568             dy21             = _mm_sub_ps(iy2,jy1);
569             dz21             = _mm_sub_ps(iz2,jz1);
570             dx22             = _mm_sub_ps(ix2,jx2);
571             dy22             = _mm_sub_ps(iy2,jy2);
572             dz22             = _mm_sub_ps(iz2,jz2);
573
574             /* Calculate squared distance and things based on it */
575             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
576             rsq01            = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
577             rsq02            = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
578             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
579             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
580             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
581             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
582             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
583             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
584
585             rinv00           = gmx_mm_invsqrt_ps(rsq00);
586             rinv01           = gmx_mm_invsqrt_ps(rsq01);
587             rinv02           = gmx_mm_invsqrt_ps(rsq02);
588             rinv10           = gmx_mm_invsqrt_ps(rsq10);
589             rinv11           = gmx_mm_invsqrt_ps(rsq11);
590             rinv12           = gmx_mm_invsqrt_ps(rsq12);
591             rinv20           = gmx_mm_invsqrt_ps(rsq20);
592             rinv21           = gmx_mm_invsqrt_ps(rsq21);
593             rinv22           = gmx_mm_invsqrt_ps(rsq22);
594
595             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
596             rinvsq01         = _mm_mul_ps(rinv01,rinv01);
597             rinvsq02         = _mm_mul_ps(rinv02,rinv02);
598             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
599             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
600             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
601             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
602             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
603             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
604
605             fjx0             = _mm_setzero_ps();
606             fjy0             = _mm_setzero_ps();
607             fjz0             = _mm_setzero_ps();
608             fjx1             = _mm_setzero_ps();
609             fjy1             = _mm_setzero_ps();
610             fjz1             = _mm_setzero_ps();
611             fjx2             = _mm_setzero_ps();
612             fjy2             = _mm_setzero_ps();
613             fjz2             = _mm_setzero_ps();
614
615             /**************************
616              * CALCULATE INTERACTIONS *
617              **************************/
618
619             /* COULOMB ELECTROSTATICS */
620             velec            = _mm_mul_ps(qq00,rinv00);
621             felec            = _mm_mul_ps(velec,rinvsq00);
622
623             /* Update potential sum for this i atom from the interaction with this j atom. */
624             velec            = _mm_andnot_ps(dummy_mask,velec);
625             velecsum         = _mm_add_ps(velecsum,velec);
626
627             fscal            = felec;
628
629             fscal            = _mm_andnot_ps(dummy_mask,fscal);
630
631             /* Calculate temporary vectorial force */
632             tx               = _mm_mul_ps(fscal,dx00);
633             ty               = _mm_mul_ps(fscal,dy00);
634             tz               = _mm_mul_ps(fscal,dz00);
635
636             /* Update vectorial force */
637             fix0             = _mm_add_ps(fix0,tx);
638             fiy0             = _mm_add_ps(fiy0,ty);
639             fiz0             = _mm_add_ps(fiz0,tz);
640
641             fjx0             = _mm_add_ps(fjx0,tx);
642             fjy0             = _mm_add_ps(fjy0,ty);
643             fjz0             = _mm_add_ps(fjz0,tz);
644
645             /**************************
646              * CALCULATE INTERACTIONS *
647              **************************/
648
649             /* COULOMB ELECTROSTATICS */
650             velec            = _mm_mul_ps(qq01,rinv01);
651             felec            = _mm_mul_ps(velec,rinvsq01);
652
653             /* Update potential sum for this i atom from the interaction with this j atom. */
654             velec            = _mm_andnot_ps(dummy_mask,velec);
655             velecsum         = _mm_add_ps(velecsum,velec);
656
657             fscal            = felec;
658
659             fscal            = _mm_andnot_ps(dummy_mask,fscal);
660
661             /* Calculate temporary vectorial force */
662             tx               = _mm_mul_ps(fscal,dx01);
663             ty               = _mm_mul_ps(fscal,dy01);
664             tz               = _mm_mul_ps(fscal,dz01);
665
666             /* Update vectorial force */
667             fix0             = _mm_add_ps(fix0,tx);
668             fiy0             = _mm_add_ps(fiy0,ty);
669             fiz0             = _mm_add_ps(fiz0,tz);
670
671             fjx1             = _mm_add_ps(fjx1,tx);
672             fjy1             = _mm_add_ps(fjy1,ty);
673             fjz1             = _mm_add_ps(fjz1,tz);
674
675             /**************************
676              * CALCULATE INTERACTIONS *
677              **************************/
678
679             /* COULOMB ELECTROSTATICS */
680             velec            = _mm_mul_ps(qq02,rinv02);
681             felec            = _mm_mul_ps(velec,rinvsq02);
682
683             /* Update potential sum for this i atom from the interaction with this j atom. */
684             velec            = _mm_andnot_ps(dummy_mask,velec);
685             velecsum         = _mm_add_ps(velecsum,velec);
686
687             fscal            = felec;
688
689             fscal            = _mm_andnot_ps(dummy_mask,fscal);
690
691             /* Calculate temporary vectorial force */
692             tx               = _mm_mul_ps(fscal,dx02);
693             ty               = _mm_mul_ps(fscal,dy02);
694             tz               = _mm_mul_ps(fscal,dz02);
695
696             /* Update vectorial force */
697             fix0             = _mm_add_ps(fix0,tx);
698             fiy0             = _mm_add_ps(fiy0,ty);
699             fiz0             = _mm_add_ps(fiz0,tz);
700
701             fjx2             = _mm_add_ps(fjx2,tx);
702             fjy2             = _mm_add_ps(fjy2,ty);
703             fjz2             = _mm_add_ps(fjz2,tz);
704
705             /**************************
706              * CALCULATE INTERACTIONS *
707              **************************/
708
709             /* COULOMB ELECTROSTATICS */
710             velec            = _mm_mul_ps(qq10,rinv10);
711             felec            = _mm_mul_ps(velec,rinvsq10);
712
713             /* Update potential sum for this i atom from the interaction with this j atom. */
714             velec            = _mm_andnot_ps(dummy_mask,velec);
715             velecsum         = _mm_add_ps(velecsum,velec);
716
717             fscal            = felec;
718
719             fscal            = _mm_andnot_ps(dummy_mask,fscal);
720
721             /* Calculate temporary vectorial force */
722             tx               = _mm_mul_ps(fscal,dx10);
723             ty               = _mm_mul_ps(fscal,dy10);
724             tz               = _mm_mul_ps(fscal,dz10);
725
726             /* Update vectorial force */
727             fix1             = _mm_add_ps(fix1,tx);
728             fiy1             = _mm_add_ps(fiy1,ty);
729             fiz1             = _mm_add_ps(fiz1,tz);
730
731             fjx0             = _mm_add_ps(fjx0,tx);
732             fjy0             = _mm_add_ps(fjy0,ty);
733             fjz0             = _mm_add_ps(fjz0,tz);
734
735             /**************************
736              * CALCULATE INTERACTIONS *
737              **************************/
738
739             /* COULOMB ELECTROSTATICS */
740             velec            = _mm_mul_ps(qq11,rinv11);
741             felec            = _mm_mul_ps(velec,rinvsq11);
742
743             /* Update potential sum for this i atom from the interaction with this j atom. */
744             velec            = _mm_andnot_ps(dummy_mask,velec);
745             velecsum         = _mm_add_ps(velecsum,velec);
746
747             fscal            = felec;
748
749             fscal            = _mm_andnot_ps(dummy_mask,fscal);
750
751             /* Calculate temporary vectorial force */
752             tx               = _mm_mul_ps(fscal,dx11);
753             ty               = _mm_mul_ps(fscal,dy11);
754             tz               = _mm_mul_ps(fscal,dz11);
755
756             /* Update vectorial force */
757             fix1             = _mm_add_ps(fix1,tx);
758             fiy1             = _mm_add_ps(fiy1,ty);
759             fiz1             = _mm_add_ps(fiz1,tz);
760
761             fjx1             = _mm_add_ps(fjx1,tx);
762             fjy1             = _mm_add_ps(fjy1,ty);
763             fjz1             = _mm_add_ps(fjz1,tz);
764
765             /**************************
766              * CALCULATE INTERACTIONS *
767              **************************/
768
769             /* COULOMB ELECTROSTATICS */
770             velec            = _mm_mul_ps(qq12,rinv12);
771             felec            = _mm_mul_ps(velec,rinvsq12);
772
773             /* Update potential sum for this i atom from the interaction with this j atom. */
774             velec            = _mm_andnot_ps(dummy_mask,velec);
775             velecsum         = _mm_add_ps(velecsum,velec);
776
777             fscal            = felec;
778
779             fscal            = _mm_andnot_ps(dummy_mask,fscal);
780
781             /* Calculate temporary vectorial force */
782             tx               = _mm_mul_ps(fscal,dx12);
783             ty               = _mm_mul_ps(fscal,dy12);
784             tz               = _mm_mul_ps(fscal,dz12);
785
786             /* Update vectorial force */
787             fix1             = _mm_add_ps(fix1,tx);
788             fiy1             = _mm_add_ps(fiy1,ty);
789             fiz1             = _mm_add_ps(fiz1,tz);
790
791             fjx2             = _mm_add_ps(fjx2,tx);
792             fjy2             = _mm_add_ps(fjy2,ty);
793             fjz2             = _mm_add_ps(fjz2,tz);
794
795             /**************************
796              * CALCULATE INTERACTIONS *
797              **************************/
798
799             /* COULOMB ELECTROSTATICS */
800             velec            = _mm_mul_ps(qq20,rinv20);
801             felec            = _mm_mul_ps(velec,rinvsq20);
802
803             /* Update potential sum for this i atom from the interaction with this j atom. */
804             velec            = _mm_andnot_ps(dummy_mask,velec);
805             velecsum         = _mm_add_ps(velecsum,velec);
806
807             fscal            = felec;
808
809             fscal            = _mm_andnot_ps(dummy_mask,fscal);
810
811             /* Calculate temporary vectorial force */
812             tx               = _mm_mul_ps(fscal,dx20);
813             ty               = _mm_mul_ps(fscal,dy20);
814             tz               = _mm_mul_ps(fscal,dz20);
815
816             /* Update vectorial force */
817             fix2             = _mm_add_ps(fix2,tx);
818             fiy2             = _mm_add_ps(fiy2,ty);
819             fiz2             = _mm_add_ps(fiz2,tz);
820
821             fjx0             = _mm_add_ps(fjx0,tx);
822             fjy0             = _mm_add_ps(fjy0,ty);
823             fjz0             = _mm_add_ps(fjz0,tz);
824
825             /**************************
826              * CALCULATE INTERACTIONS *
827              **************************/
828
829             /* COULOMB ELECTROSTATICS */
830             velec            = _mm_mul_ps(qq21,rinv21);
831             felec            = _mm_mul_ps(velec,rinvsq21);
832
833             /* Update potential sum for this i atom from the interaction with this j atom. */
834             velec            = _mm_andnot_ps(dummy_mask,velec);
835             velecsum         = _mm_add_ps(velecsum,velec);
836
837             fscal            = felec;
838
839             fscal            = _mm_andnot_ps(dummy_mask,fscal);
840
841             /* Calculate temporary vectorial force */
842             tx               = _mm_mul_ps(fscal,dx21);
843             ty               = _mm_mul_ps(fscal,dy21);
844             tz               = _mm_mul_ps(fscal,dz21);
845
846             /* Update vectorial force */
847             fix2             = _mm_add_ps(fix2,tx);
848             fiy2             = _mm_add_ps(fiy2,ty);
849             fiz2             = _mm_add_ps(fiz2,tz);
850
851             fjx1             = _mm_add_ps(fjx1,tx);
852             fjy1             = _mm_add_ps(fjy1,ty);
853             fjz1             = _mm_add_ps(fjz1,tz);
854
855             /**************************
856              * CALCULATE INTERACTIONS *
857              **************************/
858
859             /* COULOMB ELECTROSTATICS */
860             velec            = _mm_mul_ps(qq22,rinv22);
861             felec            = _mm_mul_ps(velec,rinvsq22);
862
863             /* Update potential sum for this i atom from the interaction with this j atom. */
864             velec            = _mm_andnot_ps(dummy_mask,velec);
865             velecsum         = _mm_add_ps(velecsum,velec);
866
867             fscal            = felec;
868
869             fscal            = _mm_andnot_ps(dummy_mask,fscal);
870
871             /* Calculate temporary vectorial force */
872             tx               = _mm_mul_ps(fscal,dx22);
873             ty               = _mm_mul_ps(fscal,dy22);
874             tz               = _mm_mul_ps(fscal,dz22);
875
876             /* Update vectorial force */
877             fix2             = _mm_add_ps(fix2,tx);
878             fiy2             = _mm_add_ps(fiy2,ty);
879             fiz2             = _mm_add_ps(fiz2,tz);
880
881             fjx2             = _mm_add_ps(fjx2,tx);
882             fjy2             = _mm_add_ps(fjy2,ty);
883             fjz2             = _mm_add_ps(fjz2,tz);
884
885             fjptrA             = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
886             fjptrB             = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
887             fjptrC             = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
888             fjptrD             = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
889
890             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
891                                                    fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
892
893             /* Inner loop uses 252 flops */
894         }
895
896         /* End of innermost loop */
897
898         gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
899                                               f+i_coord_offset,fshift+i_shift_offset);
900
901         ggid                        = gid[iidx];
902         /* Update potential energies */
903         gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
904
905         /* Increment number of inner iterations */
906         inneriter                  += j_index_end - j_index_start;
907
908         /* Outer loop uses 19 flops */
909     }
910
911     /* Increment number of outer iterations */
912     outeriter        += nri;
913
914     /* Update outer/inner flops */
915
916     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W3W3_VF,outeriter*19 + inneriter*252);
917 }
918 /*
919  * Gromacs nonbonded kernel:   nb_kernel_ElecCoul_VdwNone_GeomW3W3_F_sse4_1_single
920  * Electrostatics interaction: Coulomb
921  * VdW interaction:            None
922  * Geometry:                   Water3-Water3
923  * Calculate force/pot:        Force
924  */
925 void
926 nb_kernel_ElecCoul_VdwNone_GeomW3W3_F_sse4_1_single
927                     (t_nblist * gmx_restrict                nlist,
928                      rvec * gmx_restrict                    xx,
929                      rvec * gmx_restrict                    ff,
930                      t_forcerec * gmx_restrict              fr,
931                      t_mdatoms * gmx_restrict               mdatoms,
932                      nb_kernel_data_t * gmx_restrict        kernel_data,
933                      t_nrnb * gmx_restrict                  nrnb)
934 {
935     /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or 
936      * just 0 for non-waters.
937      * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
938      * jnr indices corresponding to data put in the four positions in the SIMD register.
939      */
940     int              i_shift_offset,i_coord_offset,outeriter,inneriter;
941     int              j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
942     int              jnrA,jnrB,jnrC,jnrD;
943     int              jnrlistA,jnrlistB,jnrlistC,jnrlistD;
944     int              j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
945     int              *iinr,*jindex,*jjnr,*shiftidx,*gid;
946     real             rcutoff_scalar;
947     real             *shiftvec,*fshift,*x,*f;
948     real             *fjptrA,*fjptrB,*fjptrC,*fjptrD;
949     real             scratch[4*DIM];
950     __m128           tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
951     int              vdwioffset0;
952     __m128           ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
953     int              vdwioffset1;
954     __m128           ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
955     int              vdwioffset2;
956     __m128           ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
957     int              vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
958     __m128           jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
959     int              vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
960     __m128           jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
961     int              vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
962     __m128           jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
963     __m128           dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
964     __m128           dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
965     __m128           dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
966     __m128           dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
967     __m128           dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
968     __m128           dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
969     __m128           dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
970     __m128           dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
971     __m128           dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
972     __m128           velec,felec,velecsum,facel,crf,krf,krf2;
973     real             *charge;
974     __m128           dummy_mask,cutoff_mask;
975     __m128           signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
976     __m128           one     = _mm_set1_ps(1.0);
977     __m128           two     = _mm_set1_ps(2.0);
978     x                = xx[0];
979     f                = ff[0];
980
981     nri              = nlist->nri;
982     iinr             = nlist->iinr;
983     jindex           = nlist->jindex;
984     jjnr             = nlist->jjnr;
985     shiftidx         = nlist->shift;
986     gid              = nlist->gid;
987     shiftvec         = fr->shift_vec[0];
988     fshift           = fr->fshift[0];
989     facel            = _mm_set1_ps(fr->epsfac);
990     charge           = mdatoms->chargeA;
991
992     /* Setup water-specific parameters */
993     inr              = nlist->iinr[0];
994     iq0              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
995     iq1              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
996     iq2              = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
997
998     jq0              = _mm_set1_ps(charge[inr+0]);
999     jq1              = _mm_set1_ps(charge[inr+1]);
1000     jq2              = _mm_set1_ps(charge[inr+2]);
1001     qq00             = _mm_mul_ps(iq0,jq0);
1002     qq01             = _mm_mul_ps(iq0,jq1);
1003     qq02             = _mm_mul_ps(iq0,jq2);
1004     qq10             = _mm_mul_ps(iq1,jq0);
1005     qq11             = _mm_mul_ps(iq1,jq1);
1006     qq12             = _mm_mul_ps(iq1,jq2);
1007     qq20             = _mm_mul_ps(iq2,jq0);
1008     qq21             = _mm_mul_ps(iq2,jq1);
1009     qq22             = _mm_mul_ps(iq2,jq2);
1010
1011     /* Avoid stupid compiler warnings */
1012     jnrA = jnrB = jnrC = jnrD = 0;
1013     j_coord_offsetA = 0;
1014     j_coord_offsetB = 0;
1015     j_coord_offsetC = 0;
1016     j_coord_offsetD = 0;
1017
1018     outeriter        = 0;
1019     inneriter        = 0;
1020
1021     for(iidx=0;iidx<4*DIM;iidx++)
1022     {
1023         scratch[iidx] = 0.0;
1024     }
1025
1026     /* Start outer loop over neighborlists */
1027     for(iidx=0; iidx<nri; iidx++)
1028     {
1029         /* Load shift vector for this list */
1030         i_shift_offset   = DIM*shiftidx[iidx];
1031
1032         /* Load limits for loop over neighbors */
1033         j_index_start    = jindex[iidx];
1034         j_index_end      = jindex[iidx+1];
1035
1036         /* Get outer coordinate index */
1037         inr              = iinr[iidx];
1038         i_coord_offset   = DIM*inr;
1039
1040         /* Load i particle coords and add shift vector */
1041         gmx_mm_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset,
1042                                                  &ix0,&iy0,&iz0,&ix1,&iy1,&iz1,&ix2,&iy2,&iz2);
1043
1044         fix0             = _mm_setzero_ps();
1045         fiy0             = _mm_setzero_ps();
1046         fiz0             = _mm_setzero_ps();
1047         fix1             = _mm_setzero_ps();
1048         fiy1             = _mm_setzero_ps();
1049         fiz1             = _mm_setzero_ps();
1050         fix2             = _mm_setzero_ps();
1051         fiy2             = _mm_setzero_ps();
1052         fiz2             = _mm_setzero_ps();
1053
1054         /* Start inner kernel loop */
1055         for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1056         {
1057
1058             /* Get j neighbor index, and coordinate index */
1059             jnrA             = jjnr[jidx];
1060             jnrB             = jjnr[jidx+1];
1061             jnrC             = jjnr[jidx+2];
1062             jnrD             = jjnr[jidx+3];
1063             j_coord_offsetA  = DIM*jnrA;
1064             j_coord_offsetB  = DIM*jnrB;
1065             j_coord_offsetC  = DIM*jnrC;
1066             j_coord_offsetD  = DIM*jnrD;
1067
1068             /* load j atom coordinates */
1069             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1070                                               x+j_coord_offsetC,x+j_coord_offsetD,
1071                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1072
1073             /* Calculate displacement vector */
1074             dx00             = _mm_sub_ps(ix0,jx0);
1075             dy00             = _mm_sub_ps(iy0,jy0);
1076             dz00             = _mm_sub_ps(iz0,jz0);
1077             dx01             = _mm_sub_ps(ix0,jx1);
1078             dy01             = _mm_sub_ps(iy0,jy1);
1079             dz01             = _mm_sub_ps(iz0,jz1);
1080             dx02             = _mm_sub_ps(ix0,jx2);
1081             dy02             = _mm_sub_ps(iy0,jy2);
1082             dz02             = _mm_sub_ps(iz0,jz2);
1083             dx10             = _mm_sub_ps(ix1,jx0);
1084             dy10             = _mm_sub_ps(iy1,jy0);
1085             dz10             = _mm_sub_ps(iz1,jz0);
1086             dx11             = _mm_sub_ps(ix1,jx1);
1087             dy11             = _mm_sub_ps(iy1,jy1);
1088             dz11             = _mm_sub_ps(iz1,jz1);
1089             dx12             = _mm_sub_ps(ix1,jx2);
1090             dy12             = _mm_sub_ps(iy1,jy2);
1091             dz12             = _mm_sub_ps(iz1,jz2);
1092             dx20             = _mm_sub_ps(ix2,jx0);
1093             dy20             = _mm_sub_ps(iy2,jy0);
1094             dz20             = _mm_sub_ps(iz2,jz0);
1095             dx21             = _mm_sub_ps(ix2,jx1);
1096             dy21             = _mm_sub_ps(iy2,jy1);
1097             dz21             = _mm_sub_ps(iz2,jz1);
1098             dx22             = _mm_sub_ps(ix2,jx2);
1099             dy22             = _mm_sub_ps(iy2,jy2);
1100             dz22             = _mm_sub_ps(iz2,jz2);
1101
1102             /* Calculate squared distance and things based on it */
1103             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1104             rsq01            = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1105             rsq02            = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1106             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1107             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1108             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1109             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1110             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1111             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1112
1113             rinv00           = gmx_mm_invsqrt_ps(rsq00);
1114             rinv01           = gmx_mm_invsqrt_ps(rsq01);
1115             rinv02           = gmx_mm_invsqrt_ps(rsq02);
1116             rinv10           = gmx_mm_invsqrt_ps(rsq10);
1117             rinv11           = gmx_mm_invsqrt_ps(rsq11);
1118             rinv12           = gmx_mm_invsqrt_ps(rsq12);
1119             rinv20           = gmx_mm_invsqrt_ps(rsq20);
1120             rinv21           = gmx_mm_invsqrt_ps(rsq21);
1121             rinv22           = gmx_mm_invsqrt_ps(rsq22);
1122
1123             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
1124             rinvsq01         = _mm_mul_ps(rinv01,rinv01);
1125             rinvsq02         = _mm_mul_ps(rinv02,rinv02);
1126             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
1127             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
1128             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
1129             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
1130             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
1131             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
1132
1133             fjx0             = _mm_setzero_ps();
1134             fjy0             = _mm_setzero_ps();
1135             fjz0             = _mm_setzero_ps();
1136             fjx1             = _mm_setzero_ps();
1137             fjy1             = _mm_setzero_ps();
1138             fjz1             = _mm_setzero_ps();
1139             fjx2             = _mm_setzero_ps();
1140             fjy2             = _mm_setzero_ps();
1141             fjz2             = _mm_setzero_ps();
1142
1143             /**************************
1144              * CALCULATE INTERACTIONS *
1145              **************************/
1146
1147             /* COULOMB ELECTROSTATICS */
1148             velec            = _mm_mul_ps(qq00,rinv00);
1149             felec            = _mm_mul_ps(velec,rinvsq00);
1150
1151             fscal            = felec;
1152
1153             /* Calculate temporary vectorial force */
1154             tx               = _mm_mul_ps(fscal,dx00);
1155             ty               = _mm_mul_ps(fscal,dy00);
1156             tz               = _mm_mul_ps(fscal,dz00);
1157
1158             /* Update vectorial force */
1159             fix0             = _mm_add_ps(fix0,tx);
1160             fiy0             = _mm_add_ps(fiy0,ty);
1161             fiz0             = _mm_add_ps(fiz0,tz);
1162
1163             fjx0             = _mm_add_ps(fjx0,tx);
1164             fjy0             = _mm_add_ps(fjy0,ty);
1165             fjz0             = _mm_add_ps(fjz0,tz);
1166
1167             /**************************
1168              * CALCULATE INTERACTIONS *
1169              **************************/
1170
1171             /* COULOMB ELECTROSTATICS */
1172             velec            = _mm_mul_ps(qq01,rinv01);
1173             felec            = _mm_mul_ps(velec,rinvsq01);
1174
1175             fscal            = felec;
1176
1177             /* Calculate temporary vectorial force */
1178             tx               = _mm_mul_ps(fscal,dx01);
1179             ty               = _mm_mul_ps(fscal,dy01);
1180             tz               = _mm_mul_ps(fscal,dz01);
1181
1182             /* Update vectorial force */
1183             fix0             = _mm_add_ps(fix0,tx);
1184             fiy0             = _mm_add_ps(fiy0,ty);
1185             fiz0             = _mm_add_ps(fiz0,tz);
1186
1187             fjx1             = _mm_add_ps(fjx1,tx);
1188             fjy1             = _mm_add_ps(fjy1,ty);
1189             fjz1             = _mm_add_ps(fjz1,tz);
1190
1191             /**************************
1192              * CALCULATE INTERACTIONS *
1193              **************************/
1194
1195             /* COULOMB ELECTROSTATICS */
1196             velec            = _mm_mul_ps(qq02,rinv02);
1197             felec            = _mm_mul_ps(velec,rinvsq02);
1198
1199             fscal            = felec;
1200
1201             /* Calculate temporary vectorial force */
1202             tx               = _mm_mul_ps(fscal,dx02);
1203             ty               = _mm_mul_ps(fscal,dy02);
1204             tz               = _mm_mul_ps(fscal,dz02);
1205
1206             /* Update vectorial force */
1207             fix0             = _mm_add_ps(fix0,tx);
1208             fiy0             = _mm_add_ps(fiy0,ty);
1209             fiz0             = _mm_add_ps(fiz0,tz);
1210
1211             fjx2             = _mm_add_ps(fjx2,tx);
1212             fjy2             = _mm_add_ps(fjy2,ty);
1213             fjz2             = _mm_add_ps(fjz2,tz);
1214
1215             /**************************
1216              * CALCULATE INTERACTIONS *
1217              **************************/
1218
1219             /* COULOMB ELECTROSTATICS */
1220             velec            = _mm_mul_ps(qq10,rinv10);
1221             felec            = _mm_mul_ps(velec,rinvsq10);
1222
1223             fscal            = felec;
1224
1225             /* Calculate temporary vectorial force */
1226             tx               = _mm_mul_ps(fscal,dx10);
1227             ty               = _mm_mul_ps(fscal,dy10);
1228             tz               = _mm_mul_ps(fscal,dz10);
1229
1230             /* Update vectorial force */
1231             fix1             = _mm_add_ps(fix1,tx);
1232             fiy1             = _mm_add_ps(fiy1,ty);
1233             fiz1             = _mm_add_ps(fiz1,tz);
1234
1235             fjx0             = _mm_add_ps(fjx0,tx);
1236             fjy0             = _mm_add_ps(fjy0,ty);
1237             fjz0             = _mm_add_ps(fjz0,tz);
1238
1239             /**************************
1240              * CALCULATE INTERACTIONS *
1241              **************************/
1242
1243             /* COULOMB ELECTROSTATICS */
1244             velec            = _mm_mul_ps(qq11,rinv11);
1245             felec            = _mm_mul_ps(velec,rinvsq11);
1246
1247             fscal            = felec;
1248
1249             /* Calculate temporary vectorial force */
1250             tx               = _mm_mul_ps(fscal,dx11);
1251             ty               = _mm_mul_ps(fscal,dy11);
1252             tz               = _mm_mul_ps(fscal,dz11);
1253
1254             /* Update vectorial force */
1255             fix1             = _mm_add_ps(fix1,tx);
1256             fiy1             = _mm_add_ps(fiy1,ty);
1257             fiz1             = _mm_add_ps(fiz1,tz);
1258
1259             fjx1             = _mm_add_ps(fjx1,tx);
1260             fjy1             = _mm_add_ps(fjy1,ty);
1261             fjz1             = _mm_add_ps(fjz1,tz);
1262
1263             /**************************
1264              * CALCULATE INTERACTIONS *
1265              **************************/
1266
1267             /* COULOMB ELECTROSTATICS */
1268             velec            = _mm_mul_ps(qq12,rinv12);
1269             felec            = _mm_mul_ps(velec,rinvsq12);
1270
1271             fscal            = felec;
1272
1273             /* Calculate temporary vectorial force */
1274             tx               = _mm_mul_ps(fscal,dx12);
1275             ty               = _mm_mul_ps(fscal,dy12);
1276             tz               = _mm_mul_ps(fscal,dz12);
1277
1278             /* Update vectorial force */
1279             fix1             = _mm_add_ps(fix1,tx);
1280             fiy1             = _mm_add_ps(fiy1,ty);
1281             fiz1             = _mm_add_ps(fiz1,tz);
1282
1283             fjx2             = _mm_add_ps(fjx2,tx);
1284             fjy2             = _mm_add_ps(fjy2,ty);
1285             fjz2             = _mm_add_ps(fjz2,tz);
1286
1287             /**************************
1288              * CALCULATE INTERACTIONS *
1289              **************************/
1290
1291             /* COULOMB ELECTROSTATICS */
1292             velec            = _mm_mul_ps(qq20,rinv20);
1293             felec            = _mm_mul_ps(velec,rinvsq20);
1294
1295             fscal            = felec;
1296
1297             /* Calculate temporary vectorial force */
1298             tx               = _mm_mul_ps(fscal,dx20);
1299             ty               = _mm_mul_ps(fscal,dy20);
1300             tz               = _mm_mul_ps(fscal,dz20);
1301
1302             /* Update vectorial force */
1303             fix2             = _mm_add_ps(fix2,tx);
1304             fiy2             = _mm_add_ps(fiy2,ty);
1305             fiz2             = _mm_add_ps(fiz2,tz);
1306
1307             fjx0             = _mm_add_ps(fjx0,tx);
1308             fjy0             = _mm_add_ps(fjy0,ty);
1309             fjz0             = _mm_add_ps(fjz0,tz);
1310
1311             /**************************
1312              * CALCULATE INTERACTIONS *
1313              **************************/
1314
1315             /* COULOMB ELECTROSTATICS */
1316             velec            = _mm_mul_ps(qq21,rinv21);
1317             felec            = _mm_mul_ps(velec,rinvsq21);
1318
1319             fscal            = felec;
1320
1321             /* Calculate temporary vectorial force */
1322             tx               = _mm_mul_ps(fscal,dx21);
1323             ty               = _mm_mul_ps(fscal,dy21);
1324             tz               = _mm_mul_ps(fscal,dz21);
1325
1326             /* Update vectorial force */
1327             fix2             = _mm_add_ps(fix2,tx);
1328             fiy2             = _mm_add_ps(fiy2,ty);
1329             fiz2             = _mm_add_ps(fiz2,tz);
1330
1331             fjx1             = _mm_add_ps(fjx1,tx);
1332             fjy1             = _mm_add_ps(fjy1,ty);
1333             fjz1             = _mm_add_ps(fjz1,tz);
1334
1335             /**************************
1336              * CALCULATE INTERACTIONS *
1337              **************************/
1338
1339             /* COULOMB ELECTROSTATICS */
1340             velec            = _mm_mul_ps(qq22,rinv22);
1341             felec            = _mm_mul_ps(velec,rinvsq22);
1342
1343             fscal            = felec;
1344
1345             /* Calculate temporary vectorial force */
1346             tx               = _mm_mul_ps(fscal,dx22);
1347             ty               = _mm_mul_ps(fscal,dy22);
1348             tz               = _mm_mul_ps(fscal,dz22);
1349
1350             /* Update vectorial force */
1351             fix2             = _mm_add_ps(fix2,tx);
1352             fiy2             = _mm_add_ps(fiy2,ty);
1353             fiz2             = _mm_add_ps(fiz2,tz);
1354
1355             fjx2             = _mm_add_ps(fjx2,tx);
1356             fjy2             = _mm_add_ps(fjy2,ty);
1357             fjz2             = _mm_add_ps(fjz2,tz);
1358
1359             fjptrA             = f+j_coord_offsetA;
1360             fjptrB             = f+j_coord_offsetB;
1361             fjptrC             = f+j_coord_offsetC;
1362             fjptrD             = f+j_coord_offsetD;
1363
1364             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1365                                                    fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1366
1367             /* Inner loop uses 243 flops */
1368         }
1369
1370         if(jidx<j_index_end)
1371         {
1372
1373             /* Get j neighbor index, and coordinate index */
1374             jnrlistA         = jjnr[jidx];
1375             jnrlistB         = jjnr[jidx+1];
1376             jnrlistC         = jjnr[jidx+2];
1377             jnrlistD         = jjnr[jidx+3];
1378             /* Sign of each element will be negative for non-real atoms.
1379              * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1380              * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
1381              */
1382             dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1383             jnrA       = (jnrlistA>=0) ? jnrlistA : 0;
1384             jnrB       = (jnrlistB>=0) ? jnrlistB : 0;
1385             jnrC       = (jnrlistC>=0) ? jnrlistC : 0;
1386             jnrD       = (jnrlistD>=0) ? jnrlistD : 0;
1387             j_coord_offsetA  = DIM*jnrA;
1388             j_coord_offsetB  = DIM*jnrB;
1389             j_coord_offsetC  = DIM*jnrC;
1390             j_coord_offsetD  = DIM*jnrD;
1391
1392             /* load j atom coordinates */
1393             gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1394                                               x+j_coord_offsetC,x+j_coord_offsetD,
1395                                               &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1396
1397             /* Calculate displacement vector */
1398             dx00             = _mm_sub_ps(ix0,jx0);
1399             dy00             = _mm_sub_ps(iy0,jy0);
1400             dz00             = _mm_sub_ps(iz0,jz0);
1401             dx01             = _mm_sub_ps(ix0,jx1);
1402             dy01             = _mm_sub_ps(iy0,jy1);
1403             dz01             = _mm_sub_ps(iz0,jz1);
1404             dx02             = _mm_sub_ps(ix0,jx2);
1405             dy02             = _mm_sub_ps(iy0,jy2);
1406             dz02             = _mm_sub_ps(iz0,jz2);
1407             dx10             = _mm_sub_ps(ix1,jx0);
1408             dy10             = _mm_sub_ps(iy1,jy0);
1409             dz10             = _mm_sub_ps(iz1,jz0);
1410             dx11             = _mm_sub_ps(ix1,jx1);
1411             dy11             = _mm_sub_ps(iy1,jy1);
1412             dz11             = _mm_sub_ps(iz1,jz1);
1413             dx12             = _mm_sub_ps(ix1,jx2);
1414             dy12             = _mm_sub_ps(iy1,jy2);
1415             dz12             = _mm_sub_ps(iz1,jz2);
1416             dx20             = _mm_sub_ps(ix2,jx0);
1417             dy20             = _mm_sub_ps(iy2,jy0);
1418             dz20             = _mm_sub_ps(iz2,jz0);
1419             dx21             = _mm_sub_ps(ix2,jx1);
1420             dy21             = _mm_sub_ps(iy2,jy1);
1421             dz21             = _mm_sub_ps(iz2,jz1);
1422             dx22             = _mm_sub_ps(ix2,jx2);
1423             dy22             = _mm_sub_ps(iy2,jy2);
1424             dz22             = _mm_sub_ps(iz2,jz2);
1425
1426             /* Calculate squared distance and things based on it */
1427             rsq00            = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1428             rsq01            = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1429             rsq02            = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1430             rsq10            = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1431             rsq11            = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1432             rsq12            = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1433             rsq20            = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1434             rsq21            = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1435             rsq22            = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1436
1437             rinv00           = gmx_mm_invsqrt_ps(rsq00);
1438             rinv01           = gmx_mm_invsqrt_ps(rsq01);
1439             rinv02           = gmx_mm_invsqrt_ps(rsq02);
1440             rinv10           = gmx_mm_invsqrt_ps(rsq10);
1441             rinv11           = gmx_mm_invsqrt_ps(rsq11);
1442             rinv12           = gmx_mm_invsqrt_ps(rsq12);
1443             rinv20           = gmx_mm_invsqrt_ps(rsq20);
1444             rinv21           = gmx_mm_invsqrt_ps(rsq21);
1445             rinv22           = gmx_mm_invsqrt_ps(rsq22);
1446
1447             rinvsq00         = _mm_mul_ps(rinv00,rinv00);
1448             rinvsq01         = _mm_mul_ps(rinv01,rinv01);
1449             rinvsq02         = _mm_mul_ps(rinv02,rinv02);
1450             rinvsq10         = _mm_mul_ps(rinv10,rinv10);
1451             rinvsq11         = _mm_mul_ps(rinv11,rinv11);
1452             rinvsq12         = _mm_mul_ps(rinv12,rinv12);
1453             rinvsq20         = _mm_mul_ps(rinv20,rinv20);
1454             rinvsq21         = _mm_mul_ps(rinv21,rinv21);
1455             rinvsq22         = _mm_mul_ps(rinv22,rinv22);
1456
1457             fjx0             = _mm_setzero_ps();
1458             fjy0             = _mm_setzero_ps();
1459             fjz0             = _mm_setzero_ps();
1460             fjx1             = _mm_setzero_ps();
1461             fjy1             = _mm_setzero_ps();
1462             fjz1             = _mm_setzero_ps();
1463             fjx2             = _mm_setzero_ps();
1464             fjy2             = _mm_setzero_ps();
1465             fjz2             = _mm_setzero_ps();
1466
1467             /**************************
1468              * CALCULATE INTERACTIONS *
1469              **************************/
1470
1471             /* COULOMB ELECTROSTATICS */
1472             velec            = _mm_mul_ps(qq00,rinv00);
1473             felec            = _mm_mul_ps(velec,rinvsq00);
1474
1475             fscal            = felec;
1476
1477             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1478
1479             /* Calculate temporary vectorial force */
1480             tx               = _mm_mul_ps(fscal,dx00);
1481             ty               = _mm_mul_ps(fscal,dy00);
1482             tz               = _mm_mul_ps(fscal,dz00);
1483
1484             /* Update vectorial force */
1485             fix0             = _mm_add_ps(fix0,tx);
1486             fiy0             = _mm_add_ps(fiy0,ty);
1487             fiz0             = _mm_add_ps(fiz0,tz);
1488
1489             fjx0             = _mm_add_ps(fjx0,tx);
1490             fjy0             = _mm_add_ps(fjy0,ty);
1491             fjz0             = _mm_add_ps(fjz0,tz);
1492
1493             /**************************
1494              * CALCULATE INTERACTIONS *
1495              **************************/
1496
1497             /* COULOMB ELECTROSTATICS */
1498             velec            = _mm_mul_ps(qq01,rinv01);
1499             felec            = _mm_mul_ps(velec,rinvsq01);
1500
1501             fscal            = felec;
1502
1503             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1504
1505             /* Calculate temporary vectorial force */
1506             tx               = _mm_mul_ps(fscal,dx01);
1507             ty               = _mm_mul_ps(fscal,dy01);
1508             tz               = _mm_mul_ps(fscal,dz01);
1509
1510             /* Update vectorial force */
1511             fix0             = _mm_add_ps(fix0,tx);
1512             fiy0             = _mm_add_ps(fiy0,ty);
1513             fiz0             = _mm_add_ps(fiz0,tz);
1514
1515             fjx1             = _mm_add_ps(fjx1,tx);
1516             fjy1             = _mm_add_ps(fjy1,ty);
1517             fjz1             = _mm_add_ps(fjz1,tz);
1518
1519             /**************************
1520              * CALCULATE INTERACTIONS *
1521              **************************/
1522
1523             /* COULOMB ELECTROSTATICS */
1524             velec            = _mm_mul_ps(qq02,rinv02);
1525             felec            = _mm_mul_ps(velec,rinvsq02);
1526
1527             fscal            = felec;
1528
1529             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1530
1531             /* Calculate temporary vectorial force */
1532             tx               = _mm_mul_ps(fscal,dx02);
1533             ty               = _mm_mul_ps(fscal,dy02);
1534             tz               = _mm_mul_ps(fscal,dz02);
1535
1536             /* Update vectorial force */
1537             fix0             = _mm_add_ps(fix0,tx);
1538             fiy0             = _mm_add_ps(fiy0,ty);
1539             fiz0             = _mm_add_ps(fiz0,tz);
1540
1541             fjx2             = _mm_add_ps(fjx2,tx);
1542             fjy2             = _mm_add_ps(fjy2,ty);
1543             fjz2             = _mm_add_ps(fjz2,tz);
1544
1545             /**************************
1546              * CALCULATE INTERACTIONS *
1547              **************************/
1548
1549             /* COULOMB ELECTROSTATICS */
1550             velec            = _mm_mul_ps(qq10,rinv10);
1551             felec            = _mm_mul_ps(velec,rinvsq10);
1552
1553             fscal            = felec;
1554
1555             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1556
1557             /* Calculate temporary vectorial force */
1558             tx               = _mm_mul_ps(fscal,dx10);
1559             ty               = _mm_mul_ps(fscal,dy10);
1560             tz               = _mm_mul_ps(fscal,dz10);
1561
1562             /* Update vectorial force */
1563             fix1             = _mm_add_ps(fix1,tx);
1564             fiy1             = _mm_add_ps(fiy1,ty);
1565             fiz1             = _mm_add_ps(fiz1,tz);
1566
1567             fjx0             = _mm_add_ps(fjx0,tx);
1568             fjy0             = _mm_add_ps(fjy0,ty);
1569             fjz0             = _mm_add_ps(fjz0,tz);
1570
1571             /**************************
1572              * CALCULATE INTERACTIONS *
1573              **************************/
1574
1575             /* COULOMB ELECTROSTATICS */
1576             velec            = _mm_mul_ps(qq11,rinv11);
1577             felec            = _mm_mul_ps(velec,rinvsq11);
1578
1579             fscal            = felec;
1580
1581             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1582
1583             /* Calculate temporary vectorial force */
1584             tx               = _mm_mul_ps(fscal,dx11);
1585             ty               = _mm_mul_ps(fscal,dy11);
1586             tz               = _mm_mul_ps(fscal,dz11);
1587
1588             /* Update vectorial force */
1589             fix1             = _mm_add_ps(fix1,tx);
1590             fiy1             = _mm_add_ps(fiy1,ty);
1591             fiz1             = _mm_add_ps(fiz1,tz);
1592
1593             fjx1             = _mm_add_ps(fjx1,tx);
1594             fjy1             = _mm_add_ps(fjy1,ty);
1595             fjz1             = _mm_add_ps(fjz1,tz);
1596
1597             /**************************
1598              * CALCULATE INTERACTIONS *
1599              **************************/
1600
1601             /* COULOMB ELECTROSTATICS */
1602             velec            = _mm_mul_ps(qq12,rinv12);
1603             felec            = _mm_mul_ps(velec,rinvsq12);
1604
1605             fscal            = felec;
1606
1607             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1608
1609             /* Calculate temporary vectorial force */
1610             tx               = _mm_mul_ps(fscal,dx12);
1611             ty               = _mm_mul_ps(fscal,dy12);
1612             tz               = _mm_mul_ps(fscal,dz12);
1613
1614             /* Update vectorial force */
1615             fix1             = _mm_add_ps(fix1,tx);
1616             fiy1             = _mm_add_ps(fiy1,ty);
1617             fiz1             = _mm_add_ps(fiz1,tz);
1618
1619             fjx2             = _mm_add_ps(fjx2,tx);
1620             fjy2             = _mm_add_ps(fjy2,ty);
1621             fjz2             = _mm_add_ps(fjz2,tz);
1622
1623             /**************************
1624              * CALCULATE INTERACTIONS *
1625              **************************/
1626
1627             /* COULOMB ELECTROSTATICS */
1628             velec            = _mm_mul_ps(qq20,rinv20);
1629             felec            = _mm_mul_ps(velec,rinvsq20);
1630
1631             fscal            = felec;
1632
1633             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1634
1635             /* Calculate temporary vectorial force */
1636             tx               = _mm_mul_ps(fscal,dx20);
1637             ty               = _mm_mul_ps(fscal,dy20);
1638             tz               = _mm_mul_ps(fscal,dz20);
1639
1640             /* Update vectorial force */
1641             fix2             = _mm_add_ps(fix2,tx);
1642             fiy2             = _mm_add_ps(fiy2,ty);
1643             fiz2             = _mm_add_ps(fiz2,tz);
1644
1645             fjx0             = _mm_add_ps(fjx0,tx);
1646             fjy0             = _mm_add_ps(fjy0,ty);
1647             fjz0             = _mm_add_ps(fjz0,tz);
1648
1649             /**************************
1650              * CALCULATE INTERACTIONS *
1651              **************************/
1652
1653             /* COULOMB ELECTROSTATICS */
1654             velec            = _mm_mul_ps(qq21,rinv21);
1655             felec            = _mm_mul_ps(velec,rinvsq21);
1656
1657             fscal            = felec;
1658
1659             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1660
1661             /* Calculate temporary vectorial force */
1662             tx               = _mm_mul_ps(fscal,dx21);
1663             ty               = _mm_mul_ps(fscal,dy21);
1664             tz               = _mm_mul_ps(fscal,dz21);
1665
1666             /* Update vectorial force */
1667             fix2             = _mm_add_ps(fix2,tx);
1668             fiy2             = _mm_add_ps(fiy2,ty);
1669             fiz2             = _mm_add_ps(fiz2,tz);
1670
1671             fjx1             = _mm_add_ps(fjx1,tx);
1672             fjy1             = _mm_add_ps(fjy1,ty);
1673             fjz1             = _mm_add_ps(fjz1,tz);
1674
1675             /**************************
1676              * CALCULATE INTERACTIONS *
1677              **************************/
1678
1679             /* COULOMB ELECTROSTATICS */
1680             velec            = _mm_mul_ps(qq22,rinv22);
1681             felec            = _mm_mul_ps(velec,rinvsq22);
1682
1683             fscal            = felec;
1684
1685             fscal            = _mm_andnot_ps(dummy_mask,fscal);
1686
1687             /* Calculate temporary vectorial force */
1688             tx               = _mm_mul_ps(fscal,dx22);
1689             ty               = _mm_mul_ps(fscal,dy22);
1690             tz               = _mm_mul_ps(fscal,dz22);
1691
1692             /* Update vectorial force */
1693             fix2             = _mm_add_ps(fix2,tx);
1694             fiy2             = _mm_add_ps(fiy2,ty);
1695             fiz2             = _mm_add_ps(fiz2,tz);
1696
1697             fjx2             = _mm_add_ps(fjx2,tx);
1698             fjy2             = _mm_add_ps(fjy2,ty);
1699             fjz2             = _mm_add_ps(fjz2,tz);
1700
1701             fjptrA             = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1702             fjptrB             = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1703             fjptrC             = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1704             fjptrD             = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1705
1706             gmx_mm_decrement_3rvec_4ptr_swizzle_ps(fjptrA,fjptrB,fjptrC,fjptrD,
1707                                                    fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1708
1709             /* Inner loop uses 243 flops */
1710         }
1711
1712         /* End of innermost loop */
1713
1714         gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1715                                               f+i_coord_offset,fshift+i_shift_offset);
1716
1717         /* Increment number of inner iterations */
1718         inneriter                  += j_index_end - j_index_start;
1719
1720         /* Outer loop uses 18 flops */
1721     }
1722
1723     /* Increment number of outer iterations */
1724     outeriter        += nri;
1725
1726     /* Update outer/inner flops */
1727
1728     inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W3W3_F,outeriter*18 + inneriter*243);
1729 }