2 * Note: this file was generated by the Gromacs sse2_single kernel generator.
4 * This source code is part of
8 * Copyright (c) 2001-2012, The GROMACS Development Team
10 * Gromacs is a library for molecular simulation and trajectory analysis,
11 * written by Erik Lindahl, David van der Spoel, Berk Hess, and others - for
12 * a full list of developers and information, check out http://www.gromacs.org
14 * This program is free software; you can redistribute it and/or modify it under
15 * the terms of the GNU Lesser General Public License as published by the Free
16 * Software Foundation; either version 2 of the License, or (at your option) any
19 * To help fund GROMACS development, we humbly ask that you cite
20 * the papers people have written on it - you can find them on the website.
28 #include "../nb_kernel.h"
29 #include "types/simple.h"
33 #include "gmx_math_x86_sse2_single.h"
34 #include "kernelutil_x86_sse2_single.h"
37 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJ_GeomW3W3_VF_sse2_single
38 * Electrostatics interaction: Ewald
39 * VdW interaction: LennardJones
40 * Geometry: Water3-Water3
41 * Calculate force/pot: PotentialAndForce
44 nb_kernel_ElecEw_VdwLJ_GeomW3W3_VF_sse2_single
45 (t_nblist * gmx_restrict nlist,
46 rvec * gmx_restrict xx,
47 rvec * gmx_restrict ff,
48 t_forcerec * gmx_restrict fr,
49 t_mdatoms * gmx_restrict mdatoms,
50 nb_kernel_data_t * gmx_restrict kernel_data,
51 t_nrnb * gmx_restrict nrnb)
53 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
54 * just 0 for non-waters.
55 * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
56 * jnr indices corresponding to data put in the four positions in the SIMD register.
58 int i_shift_offset,i_coord_offset,outeriter,inneriter;
59 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
60 int jnrA,jnrB,jnrC,jnrD;
61 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
62 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
63 real shX,shY,shZ,rcutoff_scalar;
64 real *shiftvec,*fshift,*x,*f;
65 __m128 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
67 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
69 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
71 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
72 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
73 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
74 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
75 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
76 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
77 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
78 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
79 __m128 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
80 __m128 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
81 __m128 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
82 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
83 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
84 __m128 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
85 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
86 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
87 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
90 __m128 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
93 __m128 one_sixth = _mm_set1_ps(1.0/6.0);
94 __m128 one_twelfth = _mm_set1_ps(1.0/12.0);
96 __m128 ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
98 __m128 dummy_mask,cutoff_mask;
99 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
100 __m128 one = _mm_set1_ps(1.0);
101 __m128 two = _mm_set1_ps(2.0);
107 jindex = nlist->jindex;
109 shiftidx = nlist->shift;
111 shiftvec = fr->shift_vec[0];
112 fshift = fr->fshift[0];
113 facel = _mm_set1_ps(fr->epsfac);
114 charge = mdatoms->chargeA;
115 nvdwtype = fr->ntype;
117 vdwtype = mdatoms->typeA;
119 sh_ewald = _mm_set1_ps(fr->ic->sh_ewald);
120 ewtab = fr->ic->tabq_coul_FDV0;
121 ewtabscale = _mm_set1_ps(fr->ic->tabq_scale);
122 ewtabhalfspace = _mm_set1_ps(0.5/fr->ic->tabq_scale);
124 /* Setup water-specific parameters */
125 inr = nlist->iinr[0];
126 iq0 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
127 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
128 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
129 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
131 jq0 = _mm_set1_ps(charge[inr+0]);
132 jq1 = _mm_set1_ps(charge[inr+1]);
133 jq2 = _mm_set1_ps(charge[inr+2]);
134 vdwjidx0A = 2*vdwtype[inr+0];
135 qq00 = _mm_mul_ps(iq0,jq0);
136 c6_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A]);
137 c12_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A+1]);
138 qq01 = _mm_mul_ps(iq0,jq1);
139 qq02 = _mm_mul_ps(iq0,jq2);
140 qq10 = _mm_mul_ps(iq1,jq0);
141 qq11 = _mm_mul_ps(iq1,jq1);
142 qq12 = _mm_mul_ps(iq1,jq2);
143 qq20 = _mm_mul_ps(iq2,jq0);
144 qq21 = _mm_mul_ps(iq2,jq1);
145 qq22 = _mm_mul_ps(iq2,jq2);
147 /* Avoid stupid compiler warnings */
148 jnrA = jnrB = jnrC = jnrD = 0;
157 /* Start outer loop over neighborlists */
158 for(iidx=0; iidx<nri; iidx++)
160 /* Load shift vector for this list */
161 i_shift_offset = DIM*shiftidx[iidx];
162 shX = shiftvec[i_shift_offset+XX];
163 shY = shiftvec[i_shift_offset+YY];
164 shZ = shiftvec[i_shift_offset+ZZ];
166 /* Load limits for loop over neighbors */
167 j_index_start = jindex[iidx];
168 j_index_end = jindex[iidx+1];
170 /* Get outer coordinate index */
172 i_coord_offset = DIM*inr;
174 /* Load i particle coords and add shift vector */
175 ix0 = _mm_set1_ps(shX + x[i_coord_offset+DIM*0+XX]);
176 iy0 = _mm_set1_ps(shY + x[i_coord_offset+DIM*0+YY]);
177 iz0 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*0+ZZ]);
178 ix1 = _mm_set1_ps(shX + x[i_coord_offset+DIM*1+XX]);
179 iy1 = _mm_set1_ps(shY + x[i_coord_offset+DIM*1+YY]);
180 iz1 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*1+ZZ]);
181 ix2 = _mm_set1_ps(shX + x[i_coord_offset+DIM*2+XX]);
182 iy2 = _mm_set1_ps(shY + x[i_coord_offset+DIM*2+YY]);
183 iz2 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*2+ZZ]);
185 fix0 = _mm_setzero_ps();
186 fiy0 = _mm_setzero_ps();
187 fiz0 = _mm_setzero_ps();
188 fix1 = _mm_setzero_ps();
189 fiy1 = _mm_setzero_ps();
190 fiz1 = _mm_setzero_ps();
191 fix2 = _mm_setzero_ps();
192 fiy2 = _mm_setzero_ps();
193 fiz2 = _mm_setzero_ps();
195 /* Reset potential sums */
196 velecsum = _mm_setzero_ps();
197 vvdwsum = _mm_setzero_ps();
199 /* Start inner kernel loop */
200 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
203 /* Get j neighbor index, and coordinate index */
209 j_coord_offsetA = DIM*jnrA;
210 j_coord_offsetB = DIM*jnrB;
211 j_coord_offsetC = DIM*jnrC;
212 j_coord_offsetD = DIM*jnrD;
214 /* load j atom coordinates */
215 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
216 x+j_coord_offsetC,x+j_coord_offsetD,
217 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
219 /* Calculate displacement vector */
220 dx00 = _mm_sub_ps(ix0,jx0);
221 dy00 = _mm_sub_ps(iy0,jy0);
222 dz00 = _mm_sub_ps(iz0,jz0);
223 dx01 = _mm_sub_ps(ix0,jx1);
224 dy01 = _mm_sub_ps(iy0,jy1);
225 dz01 = _mm_sub_ps(iz0,jz1);
226 dx02 = _mm_sub_ps(ix0,jx2);
227 dy02 = _mm_sub_ps(iy0,jy2);
228 dz02 = _mm_sub_ps(iz0,jz2);
229 dx10 = _mm_sub_ps(ix1,jx0);
230 dy10 = _mm_sub_ps(iy1,jy0);
231 dz10 = _mm_sub_ps(iz1,jz0);
232 dx11 = _mm_sub_ps(ix1,jx1);
233 dy11 = _mm_sub_ps(iy1,jy1);
234 dz11 = _mm_sub_ps(iz1,jz1);
235 dx12 = _mm_sub_ps(ix1,jx2);
236 dy12 = _mm_sub_ps(iy1,jy2);
237 dz12 = _mm_sub_ps(iz1,jz2);
238 dx20 = _mm_sub_ps(ix2,jx0);
239 dy20 = _mm_sub_ps(iy2,jy0);
240 dz20 = _mm_sub_ps(iz2,jz0);
241 dx21 = _mm_sub_ps(ix2,jx1);
242 dy21 = _mm_sub_ps(iy2,jy1);
243 dz21 = _mm_sub_ps(iz2,jz1);
244 dx22 = _mm_sub_ps(ix2,jx2);
245 dy22 = _mm_sub_ps(iy2,jy2);
246 dz22 = _mm_sub_ps(iz2,jz2);
248 /* Calculate squared distance and things based on it */
249 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
250 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
251 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
252 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
253 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
254 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
255 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
256 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
257 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
259 rinv00 = gmx_mm_invsqrt_ps(rsq00);
260 rinv01 = gmx_mm_invsqrt_ps(rsq01);
261 rinv02 = gmx_mm_invsqrt_ps(rsq02);
262 rinv10 = gmx_mm_invsqrt_ps(rsq10);
263 rinv11 = gmx_mm_invsqrt_ps(rsq11);
264 rinv12 = gmx_mm_invsqrt_ps(rsq12);
265 rinv20 = gmx_mm_invsqrt_ps(rsq20);
266 rinv21 = gmx_mm_invsqrt_ps(rsq21);
267 rinv22 = gmx_mm_invsqrt_ps(rsq22);
269 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
270 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
271 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
272 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
273 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
274 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
275 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
276 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
277 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
279 fjx0 = _mm_setzero_ps();
280 fjy0 = _mm_setzero_ps();
281 fjz0 = _mm_setzero_ps();
282 fjx1 = _mm_setzero_ps();
283 fjy1 = _mm_setzero_ps();
284 fjz1 = _mm_setzero_ps();
285 fjx2 = _mm_setzero_ps();
286 fjy2 = _mm_setzero_ps();
287 fjz2 = _mm_setzero_ps();
289 /**************************
290 * CALCULATE INTERACTIONS *
291 **************************/
293 r00 = _mm_mul_ps(rsq00,rinv00);
295 /* EWALD ELECTROSTATICS */
297 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
298 ewrt = _mm_mul_ps(r00,ewtabscale);
299 ewitab = _mm_cvttps_epi32(ewrt);
300 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
301 ewitab = _mm_slli_epi32(ewitab,2);
302 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
303 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
304 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
305 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
306 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
307 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
308 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
309 velec = _mm_mul_ps(qq00,_mm_sub_ps(rinv00,velec));
310 felec = _mm_mul_ps(_mm_mul_ps(qq00,rinv00),_mm_sub_ps(rinvsq00,felec));
312 /* LENNARD-JONES DISPERSION/REPULSION */
314 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
315 vvdw6 = _mm_mul_ps(c6_00,rinvsix);
316 vvdw12 = _mm_mul_ps(c12_00,_mm_mul_ps(rinvsix,rinvsix));
317 vvdw = _mm_sub_ps( _mm_mul_ps(vvdw12,one_twelfth) , _mm_mul_ps(vvdw6,one_sixth) );
318 fvdw = _mm_mul_ps(_mm_sub_ps(vvdw12,vvdw6),rinvsq00);
320 /* Update potential sum for this i atom from the interaction with this j atom. */
321 velecsum = _mm_add_ps(velecsum,velec);
322 vvdwsum = _mm_add_ps(vvdwsum,vvdw);
324 fscal = _mm_add_ps(felec,fvdw);
326 /* Calculate temporary vectorial force */
327 tx = _mm_mul_ps(fscal,dx00);
328 ty = _mm_mul_ps(fscal,dy00);
329 tz = _mm_mul_ps(fscal,dz00);
331 /* Update vectorial force */
332 fix0 = _mm_add_ps(fix0,tx);
333 fiy0 = _mm_add_ps(fiy0,ty);
334 fiz0 = _mm_add_ps(fiz0,tz);
336 fjx0 = _mm_add_ps(fjx0,tx);
337 fjy0 = _mm_add_ps(fjy0,ty);
338 fjz0 = _mm_add_ps(fjz0,tz);
340 /**************************
341 * CALCULATE INTERACTIONS *
342 **************************/
344 r01 = _mm_mul_ps(rsq01,rinv01);
346 /* EWALD ELECTROSTATICS */
348 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
349 ewrt = _mm_mul_ps(r01,ewtabscale);
350 ewitab = _mm_cvttps_epi32(ewrt);
351 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
352 ewitab = _mm_slli_epi32(ewitab,2);
353 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
354 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
355 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
356 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
357 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
358 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
359 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
360 velec = _mm_mul_ps(qq01,_mm_sub_ps(rinv01,velec));
361 felec = _mm_mul_ps(_mm_mul_ps(qq01,rinv01),_mm_sub_ps(rinvsq01,felec));
363 /* Update potential sum for this i atom from the interaction with this j atom. */
364 velecsum = _mm_add_ps(velecsum,velec);
368 /* Calculate temporary vectorial force */
369 tx = _mm_mul_ps(fscal,dx01);
370 ty = _mm_mul_ps(fscal,dy01);
371 tz = _mm_mul_ps(fscal,dz01);
373 /* Update vectorial force */
374 fix0 = _mm_add_ps(fix0,tx);
375 fiy0 = _mm_add_ps(fiy0,ty);
376 fiz0 = _mm_add_ps(fiz0,tz);
378 fjx1 = _mm_add_ps(fjx1,tx);
379 fjy1 = _mm_add_ps(fjy1,ty);
380 fjz1 = _mm_add_ps(fjz1,tz);
382 /**************************
383 * CALCULATE INTERACTIONS *
384 **************************/
386 r02 = _mm_mul_ps(rsq02,rinv02);
388 /* EWALD ELECTROSTATICS */
390 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
391 ewrt = _mm_mul_ps(r02,ewtabscale);
392 ewitab = _mm_cvttps_epi32(ewrt);
393 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
394 ewitab = _mm_slli_epi32(ewitab,2);
395 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
396 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
397 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
398 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
399 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
400 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
401 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
402 velec = _mm_mul_ps(qq02,_mm_sub_ps(rinv02,velec));
403 felec = _mm_mul_ps(_mm_mul_ps(qq02,rinv02),_mm_sub_ps(rinvsq02,felec));
405 /* Update potential sum for this i atom from the interaction with this j atom. */
406 velecsum = _mm_add_ps(velecsum,velec);
410 /* Calculate temporary vectorial force */
411 tx = _mm_mul_ps(fscal,dx02);
412 ty = _mm_mul_ps(fscal,dy02);
413 tz = _mm_mul_ps(fscal,dz02);
415 /* Update vectorial force */
416 fix0 = _mm_add_ps(fix0,tx);
417 fiy0 = _mm_add_ps(fiy0,ty);
418 fiz0 = _mm_add_ps(fiz0,tz);
420 fjx2 = _mm_add_ps(fjx2,tx);
421 fjy2 = _mm_add_ps(fjy2,ty);
422 fjz2 = _mm_add_ps(fjz2,tz);
424 /**************************
425 * CALCULATE INTERACTIONS *
426 **************************/
428 r10 = _mm_mul_ps(rsq10,rinv10);
430 /* EWALD ELECTROSTATICS */
432 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
433 ewrt = _mm_mul_ps(r10,ewtabscale);
434 ewitab = _mm_cvttps_epi32(ewrt);
435 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
436 ewitab = _mm_slli_epi32(ewitab,2);
437 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
438 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
439 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
440 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
441 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
442 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
443 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
444 velec = _mm_mul_ps(qq10,_mm_sub_ps(rinv10,velec));
445 felec = _mm_mul_ps(_mm_mul_ps(qq10,rinv10),_mm_sub_ps(rinvsq10,felec));
447 /* Update potential sum for this i atom from the interaction with this j atom. */
448 velecsum = _mm_add_ps(velecsum,velec);
452 /* Calculate temporary vectorial force */
453 tx = _mm_mul_ps(fscal,dx10);
454 ty = _mm_mul_ps(fscal,dy10);
455 tz = _mm_mul_ps(fscal,dz10);
457 /* Update vectorial force */
458 fix1 = _mm_add_ps(fix1,tx);
459 fiy1 = _mm_add_ps(fiy1,ty);
460 fiz1 = _mm_add_ps(fiz1,tz);
462 fjx0 = _mm_add_ps(fjx0,tx);
463 fjy0 = _mm_add_ps(fjy0,ty);
464 fjz0 = _mm_add_ps(fjz0,tz);
466 /**************************
467 * CALCULATE INTERACTIONS *
468 **************************/
470 r11 = _mm_mul_ps(rsq11,rinv11);
472 /* EWALD ELECTROSTATICS */
474 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
475 ewrt = _mm_mul_ps(r11,ewtabscale);
476 ewitab = _mm_cvttps_epi32(ewrt);
477 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
478 ewitab = _mm_slli_epi32(ewitab,2);
479 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
480 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
481 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
482 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
483 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
484 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
485 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
486 velec = _mm_mul_ps(qq11,_mm_sub_ps(rinv11,velec));
487 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
489 /* Update potential sum for this i atom from the interaction with this j atom. */
490 velecsum = _mm_add_ps(velecsum,velec);
494 /* Calculate temporary vectorial force */
495 tx = _mm_mul_ps(fscal,dx11);
496 ty = _mm_mul_ps(fscal,dy11);
497 tz = _mm_mul_ps(fscal,dz11);
499 /* Update vectorial force */
500 fix1 = _mm_add_ps(fix1,tx);
501 fiy1 = _mm_add_ps(fiy1,ty);
502 fiz1 = _mm_add_ps(fiz1,tz);
504 fjx1 = _mm_add_ps(fjx1,tx);
505 fjy1 = _mm_add_ps(fjy1,ty);
506 fjz1 = _mm_add_ps(fjz1,tz);
508 /**************************
509 * CALCULATE INTERACTIONS *
510 **************************/
512 r12 = _mm_mul_ps(rsq12,rinv12);
514 /* EWALD ELECTROSTATICS */
516 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
517 ewrt = _mm_mul_ps(r12,ewtabscale);
518 ewitab = _mm_cvttps_epi32(ewrt);
519 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
520 ewitab = _mm_slli_epi32(ewitab,2);
521 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
522 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
523 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
524 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
525 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
526 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
527 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
528 velec = _mm_mul_ps(qq12,_mm_sub_ps(rinv12,velec));
529 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
531 /* Update potential sum for this i atom from the interaction with this j atom. */
532 velecsum = _mm_add_ps(velecsum,velec);
536 /* Calculate temporary vectorial force */
537 tx = _mm_mul_ps(fscal,dx12);
538 ty = _mm_mul_ps(fscal,dy12);
539 tz = _mm_mul_ps(fscal,dz12);
541 /* Update vectorial force */
542 fix1 = _mm_add_ps(fix1,tx);
543 fiy1 = _mm_add_ps(fiy1,ty);
544 fiz1 = _mm_add_ps(fiz1,tz);
546 fjx2 = _mm_add_ps(fjx2,tx);
547 fjy2 = _mm_add_ps(fjy2,ty);
548 fjz2 = _mm_add_ps(fjz2,tz);
550 /**************************
551 * CALCULATE INTERACTIONS *
552 **************************/
554 r20 = _mm_mul_ps(rsq20,rinv20);
556 /* EWALD ELECTROSTATICS */
558 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
559 ewrt = _mm_mul_ps(r20,ewtabscale);
560 ewitab = _mm_cvttps_epi32(ewrt);
561 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
562 ewitab = _mm_slli_epi32(ewitab,2);
563 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
564 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
565 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
566 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
567 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
568 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
569 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
570 velec = _mm_mul_ps(qq20,_mm_sub_ps(rinv20,velec));
571 felec = _mm_mul_ps(_mm_mul_ps(qq20,rinv20),_mm_sub_ps(rinvsq20,felec));
573 /* Update potential sum for this i atom from the interaction with this j atom. */
574 velecsum = _mm_add_ps(velecsum,velec);
578 /* Calculate temporary vectorial force */
579 tx = _mm_mul_ps(fscal,dx20);
580 ty = _mm_mul_ps(fscal,dy20);
581 tz = _mm_mul_ps(fscal,dz20);
583 /* Update vectorial force */
584 fix2 = _mm_add_ps(fix2,tx);
585 fiy2 = _mm_add_ps(fiy2,ty);
586 fiz2 = _mm_add_ps(fiz2,tz);
588 fjx0 = _mm_add_ps(fjx0,tx);
589 fjy0 = _mm_add_ps(fjy0,ty);
590 fjz0 = _mm_add_ps(fjz0,tz);
592 /**************************
593 * CALCULATE INTERACTIONS *
594 **************************/
596 r21 = _mm_mul_ps(rsq21,rinv21);
598 /* EWALD ELECTROSTATICS */
600 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
601 ewrt = _mm_mul_ps(r21,ewtabscale);
602 ewitab = _mm_cvttps_epi32(ewrt);
603 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
604 ewitab = _mm_slli_epi32(ewitab,2);
605 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
606 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
607 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
608 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
609 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
610 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
611 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
612 velec = _mm_mul_ps(qq21,_mm_sub_ps(rinv21,velec));
613 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
615 /* Update potential sum for this i atom from the interaction with this j atom. */
616 velecsum = _mm_add_ps(velecsum,velec);
620 /* Calculate temporary vectorial force */
621 tx = _mm_mul_ps(fscal,dx21);
622 ty = _mm_mul_ps(fscal,dy21);
623 tz = _mm_mul_ps(fscal,dz21);
625 /* Update vectorial force */
626 fix2 = _mm_add_ps(fix2,tx);
627 fiy2 = _mm_add_ps(fiy2,ty);
628 fiz2 = _mm_add_ps(fiz2,tz);
630 fjx1 = _mm_add_ps(fjx1,tx);
631 fjy1 = _mm_add_ps(fjy1,ty);
632 fjz1 = _mm_add_ps(fjz1,tz);
634 /**************************
635 * CALCULATE INTERACTIONS *
636 **************************/
638 r22 = _mm_mul_ps(rsq22,rinv22);
640 /* EWALD ELECTROSTATICS */
642 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
643 ewrt = _mm_mul_ps(r22,ewtabscale);
644 ewitab = _mm_cvttps_epi32(ewrt);
645 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
646 ewitab = _mm_slli_epi32(ewitab,2);
647 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
648 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
649 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
650 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
651 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
652 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
653 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
654 velec = _mm_mul_ps(qq22,_mm_sub_ps(rinv22,velec));
655 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
657 /* Update potential sum for this i atom from the interaction with this j atom. */
658 velecsum = _mm_add_ps(velecsum,velec);
662 /* Calculate temporary vectorial force */
663 tx = _mm_mul_ps(fscal,dx22);
664 ty = _mm_mul_ps(fscal,dy22);
665 tz = _mm_mul_ps(fscal,dz22);
667 /* Update vectorial force */
668 fix2 = _mm_add_ps(fix2,tx);
669 fiy2 = _mm_add_ps(fiy2,ty);
670 fiz2 = _mm_add_ps(fiz2,tz);
672 fjx2 = _mm_add_ps(fjx2,tx);
673 fjy2 = _mm_add_ps(fjy2,ty);
674 fjz2 = _mm_add_ps(fjz2,tz);
676 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
677 f+j_coord_offsetC,f+j_coord_offsetD,
678 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
680 /* Inner loop uses 381 flops */
686 /* Get j neighbor index, and coordinate index */
692 /* Sign of each element will be negative for non-real atoms.
693 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
694 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
696 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
697 jnrA = (jnrA>=0) ? jnrA : 0;
698 jnrB = (jnrB>=0) ? jnrB : 0;
699 jnrC = (jnrC>=0) ? jnrC : 0;
700 jnrD = (jnrD>=0) ? jnrD : 0;
702 j_coord_offsetA = DIM*jnrA;
703 j_coord_offsetB = DIM*jnrB;
704 j_coord_offsetC = DIM*jnrC;
705 j_coord_offsetD = DIM*jnrD;
707 /* load j atom coordinates */
708 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
709 x+j_coord_offsetC,x+j_coord_offsetD,
710 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
712 /* Calculate displacement vector */
713 dx00 = _mm_sub_ps(ix0,jx0);
714 dy00 = _mm_sub_ps(iy0,jy0);
715 dz00 = _mm_sub_ps(iz0,jz0);
716 dx01 = _mm_sub_ps(ix0,jx1);
717 dy01 = _mm_sub_ps(iy0,jy1);
718 dz01 = _mm_sub_ps(iz0,jz1);
719 dx02 = _mm_sub_ps(ix0,jx2);
720 dy02 = _mm_sub_ps(iy0,jy2);
721 dz02 = _mm_sub_ps(iz0,jz2);
722 dx10 = _mm_sub_ps(ix1,jx0);
723 dy10 = _mm_sub_ps(iy1,jy0);
724 dz10 = _mm_sub_ps(iz1,jz0);
725 dx11 = _mm_sub_ps(ix1,jx1);
726 dy11 = _mm_sub_ps(iy1,jy1);
727 dz11 = _mm_sub_ps(iz1,jz1);
728 dx12 = _mm_sub_ps(ix1,jx2);
729 dy12 = _mm_sub_ps(iy1,jy2);
730 dz12 = _mm_sub_ps(iz1,jz2);
731 dx20 = _mm_sub_ps(ix2,jx0);
732 dy20 = _mm_sub_ps(iy2,jy0);
733 dz20 = _mm_sub_ps(iz2,jz0);
734 dx21 = _mm_sub_ps(ix2,jx1);
735 dy21 = _mm_sub_ps(iy2,jy1);
736 dz21 = _mm_sub_ps(iz2,jz1);
737 dx22 = _mm_sub_ps(ix2,jx2);
738 dy22 = _mm_sub_ps(iy2,jy2);
739 dz22 = _mm_sub_ps(iz2,jz2);
741 /* Calculate squared distance and things based on it */
742 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
743 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
744 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
745 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
746 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
747 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
748 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
749 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
750 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
752 rinv00 = gmx_mm_invsqrt_ps(rsq00);
753 rinv01 = gmx_mm_invsqrt_ps(rsq01);
754 rinv02 = gmx_mm_invsqrt_ps(rsq02);
755 rinv10 = gmx_mm_invsqrt_ps(rsq10);
756 rinv11 = gmx_mm_invsqrt_ps(rsq11);
757 rinv12 = gmx_mm_invsqrt_ps(rsq12);
758 rinv20 = gmx_mm_invsqrt_ps(rsq20);
759 rinv21 = gmx_mm_invsqrt_ps(rsq21);
760 rinv22 = gmx_mm_invsqrt_ps(rsq22);
762 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
763 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
764 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
765 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
766 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
767 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
768 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
769 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
770 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
772 fjx0 = _mm_setzero_ps();
773 fjy0 = _mm_setzero_ps();
774 fjz0 = _mm_setzero_ps();
775 fjx1 = _mm_setzero_ps();
776 fjy1 = _mm_setzero_ps();
777 fjz1 = _mm_setzero_ps();
778 fjx2 = _mm_setzero_ps();
779 fjy2 = _mm_setzero_ps();
780 fjz2 = _mm_setzero_ps();
782 /**************************
783 * CALCULATE INTERACTIONS *
784 **************************/
786 r00 = _mm_mul_ps(rsq00,rinv00);
787 r00 = _mm_andnot_ps(dummy_mask,r00);
789 /* EWALD ELECTROSTATICS */
791 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
792 ewrt = _mm_mul_ps(r00,ewtabscale);
793 ewitab = _mm_cvttps_epi32(ewrt);
794 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
795 ewitab = _mm_slli_epi32(ewitab,2);
796 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
797 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
798 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
799 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
800 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
801 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
802 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
803 velec = _mm_mul_ps(qq00,_mm_sub_ps(rinv00,velec));
804 felec = _mm_mul_ps(_mm_mul_ps(qq00,rinv00),_mm_sub_ps(rinvsq00,felec));
806 /* LENNARD-JONES DISPERSION/REPULSION */
808 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
809 vvdw6 = _mm_mul_ps(c6_00,rinvsix);
810 vvdw12 = _mm_mul_ps(c12_00,_mm_mul_ps(rinvsix,rinvsix));
811 vvdw = _mm_sub_ps( _mm_mul_ps(vvdw12,one_twelfth) , _mm_mul_ps(vvdw6,one_sixth) );
812 fvdw = _mm_mul_ps(_mm_sub_ps(vvdw12,vvdw6),rinvsq00);
814 /* Update potential sum for this i atom from the interaction with this j atom. */
815 velec = _mm_andnot_ps(dummy_mask,velec);
816 velecsum = _mm_add_ps(velecsum,velec);
817 vvdw = _mm_andnot_ps(dummy_mask,vvdw);
818 vvdwsum = _mm_add_ps(vvdwsum,vvdw);
820 fscal = _mm_add_ps(felec,fvdw);
822 fscal = _mm_andnot_ps(dummy_mask,fscal);
824 /* Calculate temporary vectorial force */
825 tx = _mm_mul_ps(fscal,dx00);
826 ty = _mm_mul_ps(fscal,dy00);
827 tz = _mm_mul_ps(fscal,dz00);
829 /* Update vectorial force */
830 fix0 = _mm_add_ps(fix0,tx);
831 fiy0 = _mm_add_ps(fiy0,ty);
832 fiz0 = _mm_add_ps(fiz0,tz);
834 fjx0 = _mm_add_ps(fjx0,tx);
835 fjy0 = _mm_add_ps(fjy0,ty);
836 fjz0 = _mm_add_ps(fjz0,tz);
838 /**************************
839 * CALCULATE INTERACTIONS *
840 **************************/
842 r01 = _mm_mul_ps(rsq01,rinv01);
843 r01 = _mm_andnot_ps(dummy_mask,r01);
845 /* EWALD ELECTROSTATICS */
847 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
848 ewrt = _mm_mul_ps(r01,ewtabscale);
849 ewitab = _mm_cvttps_epi32(ewrt);
850 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
851 ewitab = _mm_slli_epi32(ewitab,2);
852 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
853 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
854 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
855 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
856 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
857 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
858 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
859 velec = _mm_mul_ps(qq01,_mm_sub_ps(rinv01,velec));
860 felec = _mm_mul_ps(_mm_mul_ps(qq01,rinv01),_mm_sub_ps(rinvsq01,felec));
862 /* Update potential sum for this i atom from the interaction with this j atom. */
863 velec = _mm_andnot_ps(dummy_mask,velec);
864 velecsum = _mm_add_ps(velecsum,velec);
868 fscal = _mm_andnot_ps(dummy_mask,fscal);
870 /* Calculate temporary vectorial force */
871 tx = _mm_mul_ps(fscal,dx01);
872 ty = _mm_mul_ps(fscal,dy01);
873 tz = _mm_mul_ps(fscal,dz01);
875 /* Update vectorial force */
876 fix0 = _mm_add_ps(fix0,tx);
877 fiy0 = _mm_add_ps(fiy0,ty);
878 fiz0 = _mm_add_ps(fiz0,tz);
880 fjx1 = _mm_add_ps(fjx1,tx);
881 fjy1 = _mm_add_ps(fjy1,ty);
882 fjz1 = _mm_add_ps(fjz1,tz);
884 /**************************
885 * CALCULATE INTERACTIONS *
886 **************************/
888 r02 = _mm_mul_ps(rsq02,rinv02);
889 r02 = _mm_andnot_ps(dummy_mask,r02);
891 /* EWALD ELECTROSTATICS */
893 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
894 ewrt = _mm_mul_ps(r02,ewtabscale);
895 ewitab = _mm_cvttps_epi32(ewrt);
896 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
897 ewitab = _mm_slli_epi32(ewitab,2);
898 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
899 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
900 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
901 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
902 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
903 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
904 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
905 velec = _mm_mul_ps(qq02,_mm_sub_ps(rinv02,velec));
906 felec = _mm_mul_ps(_mm_mul_ps(qq02,rinv02),_mm_sub_ps(rinvsq02,felec));
908 /* Update potential sum for this i atom from the interaction with this j atom. */
909 velec = _mm_andnot_ps(dummy_mask,velec);
910 velecsum = _mm_add_ps(velecsum,velec);
914 fscal = _mm_andnot_ps(dummy_mask,fscal);
916 /* Calculate temporary vectorial force */
917 tx = _mm_mul_ps(fscal,dx02);
918 ty = _mm_mul_ps(fscal,dy02);
919 tz = _mm_mul_ps(fscal,dz02);
921 /* Update vectorial force */
922 fix0 = _mm_add_ps(fix0,tx);
923 fiy0 = _mm_add_ps(fiy0,ty);
924 fiz0 = _mm_add_ps(fiz0,tz);
926 fjx2 = _mm_add_ps(fjx2,tx);
927 fjy2 = _mm_add_ps(fjy2,ty);
928 fjz2 = _mm_add_ps(fjz2,tz);
930 /**************************
931 * CALCULATE INTERACTIONS *
932 **************************/
934 r10 = _mm_mul_ps(rsq10,rinv10);
935 r10 = _mm_andnot_ps(dummy_mask,r10);
937 /* EWALD ELECTROSTATICS */
939 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
940 ewrt = _mm_mul_ps(r10,ewtabscale);
941 ewitab = _mm_cvttps_epi32(ewrt);
942 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
943 ewitab = _mm_slli_epi32(ewitab,2);
944 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
945 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
946 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
947 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
948 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
949 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
950 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
951 velec = _mm_mul_ps(qq10,_mm_sub_ps(rinv10,velec));
952 felec = _mm_mul_ps(_mm_mul_ps(qq10,rinv10),_mm_sub_ps(rinvsq10,felec));
954 /* Update potential sum for this i atom from the interaction with this j atom. */
955 velec = _mm_andnot_ps(dummy_mask,velec);
956 velecsum = _mm_add_ps(velecsum,velec);
960 fscal = _mm_andnot_ps(dummy_mask,fscal);
962 /* Calculate temporary vectorial force */
963 tx = _mm_mul_ps(fscal,dx10);
964 ty = _mm_mul_ps(fscal,dy10);
965 tz = _mm_mul_ps(fscal,dz10);
967 /* Update vectorial force */
968 fix1 = _mm_add_ps(fix1,tx);
969 fiy1 = _mm_add_ps(fiy1,ty);
970 fiz1 = _mm_add_ps(fiz1,tz);
972 fjx0 = _mm_add_ps(fjx0,tx);
973 fjy0 = _mm_add_ps(fjy0,ty);
974 fjz0 = _mm_add_ps(fjz0,tz);
976 /**************************
977 * CALCULATE INTERACTIONS *
978 **************************/
980 r11 = _mm_mul_ps(rsq11,rinv11);
981 r11 = _mm_andnot_ps(dummy_mask,r11);
983 /* EWALD ELECTROSTATICS */
985 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
986 ewrt = _mm_mul_ps(r11,ewtabscale);
987 ewitab = _mm_cvttps_epi32(ewrt);
988 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
989 ewitab = _mm_slli_epi32(ewitab,2);
990 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
991 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
992 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
993 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
994 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
995 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
996 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
997 velec = _mm_mul_ps(qq11,_mm_sub_ps(rinv11,velec));
998 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
1000 /* Update potential sum for this i atom from the interaction with this j atom. */
1001 velec = _mm_andnot_ps(dummy_mask,velec);
1002 velecsum = _mm_add_ps(velecsum,velec);
1006 fscal = _mm_andnot_ps(dummy_mask,fscal);
1008 /* Calculate temporary vectorial force */
1009 tx = _mm_mul_ps(fscal,dx11);
1010 ty = _mm_mul_ps(fscal,dy11);
1011 tz = _mm_mul_ps(fscal,dz11);
1013 /* Update vectorial force */
1014 fix1 = _mm_add_ps(fix1,tx);
1015 fiy1 = _mm_add_ps(fiy1,ty);
1016 fiz1 = _mm_add_ps(fiz1,tz);
1018 fjx1 = _mm_add_ps(fjx1,tx);
1019 fjy1 = _mm_add_ps(fjy1,ty);
1020 fjz1 = _mm_add_ps(fjz1,tz);
1022 /**************************
1023 * CALCULATE INTERACTIONS *
1024 **************************/
1026 r12 = _mm_mul_ps(rsq12,rinv12);
1027 r12 = _mm_andnot_ps(dummy_mask,r12);
1029 /* EWALD ELECTROSTATICS */
1031 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1032 ewrt = _mm_mul_ps(r12,ewtabscale);
1033 ewitab = _mm_cvttps_epi32(ewrt);
1034 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1035 ewitab = _mm_slli_epi32(ewitab,2);
1036 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1037 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1038 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1039 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1040 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1041 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1042 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1043 velec = _mm_mul_ps(qq12,_mm_sub_ps(rinv12,velec));
1044 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
1046 /* Update potential sum for this i atom from the interaction with this j atom. */
1047 velec = _mm_andnot_ps(dummy_mask,velec);
1048 velecsum = _mm_add_ps(velecsum,velec);
1052 fscal = _mm_andnot_ps(dummy_mask,fscal);
1054 /* Calculate temporary vectorial force */
1055 tx = _mm_mul_ps(fscal,dx12);
1056 ty = _mm_mul_ps(fscal,dy12);
1057 tz = _mm_mul_ps(fscal,dz12);
1059 /* Update vectorial force */
1060 fix1 = _mm_add_ps(fix1,tx);
1061 fiy1 = _mm_add_ps(fiy1,ty);
1062 fiz1 = _mm_add_ps(fiz1,tz);
1064 fjx2 = _mm_add_ps(fjx2,tx);
1065 fjy2 = _mm_add_ps(fjy2,ty);
1066 fjz2 = _mm_add_ps(fjz2,tz);
1068 /**************************
1069 * CALCULATE INTERACTIONS *
1070 **************************/
1072 r20 = _mm_mul_ps(rsq20,rinv20);
1073 r20 = _mm_andnot_ps(dummy_mask,r20);
1075 /* EWALD ELECTROSTATICS */
1077 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1078 ewrt = _mm_mul_ps(r20,ewtabscale);
1079 ewitab = _mm_cvttps_epi32(ewrt);
1080 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1081 ewitab = _mm_slli_epi32(ewitab,2);
1082 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1083 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1084 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1085 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1086 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1087 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1088 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1089 velec = _mm_mul_ps(qq20,_mm_sub_ps(rinv20,velec));
1090 felec = _mm_mul_ps(_mm_mul_ps(qq20,rinv20),_mm_sub_ps(rinvsq20,felec));
1092 /* Update potential sum for this i atom from the interaction with this j atom. */
1093 velec = _mm_andnot_ps(dummy_mask,velec);
1094 velecsum = _mm_add_ps(velecsum,velec);
1098 fscal = _mm_andnot_ps(dummy_mask,fscal);
1100 /* Calculate temporary vectorial force */
1101 tx = _mm_mul_ps(fscal,dx20);
1102 ty = _mm_mul_ps(fscal,dy20);
1103 tz = _mm_mul_ps(fscal,dz20);
1105 /* Update vectorial force */
1106 fix2 = _mm_add_ps(fix2,tx);
1107 fiy2 = _mm_add_ps(fiy2,ty);
1108 fiz2 = _mm_add_ps(fiz2,tz);
1110 fjx0 = _mm_add_ps(fjx0,tx);
1111 fjy0 = _mm_add_ps(fjy0,ty);
1112 fjz0 = _mm_add_ps(fjz0,tz);
1114 /**************************
1115 * CALCULATE INTERACTIONS *
1116 **************************/
1118 r21 = _mm_mul_ps(rsq21,rinv21);
1119 r21 = _mm_andnot_ps(dummy_mask,r21);
1121 /* EWALD ELECTROSTATICS */
1123 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1124 ewrt = _mm_mul_ps(r21,ewtabscale);
1125 ewitab = _mm_cvttps_epi32(ewrt);
1126 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1127 ewitab = _mm_slli_epi32(ewitab,2);
1128 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1129 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1130 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1131 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1132 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1133 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1134 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1135 velec = _mm_mul_ps(qq21,_mm_sub_ps(rinv21,velec));
1136 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
1138 /* Update potential sum for this i atom from the interaction with this j atom. */
1139 velec = _mm_andnot_ps(dummy_mask,velec);
1140 velecsum = _mm_add_ps(velecsum,velec);
1144 fscal = _mm_andnot_ps(dummy_mask,fscal);
1146 /* Calculate temporary vectorial force */
1147 tx = _mm_mul_ps(fscal,dx21);
1148 ty = _mm_mul_ps(fscal,dy21);
1149 tz = _mm_mul_ps(fscal,dz21);
1151 /* Update vectorial force */
1152 fix2 = _mm_add_ps(fix2,tx);
1153 fiy2 = _mm_add_ps(fiy2,ty);
1154 fiz2 = _mm_add_ps(fiz2,tz);
1156 fjx1 = _mm_add_ps(fjx1,tx);
1157 fjy1 = _mm_add_ps(fjy1,ty);
1158 fjz1 = _mm_add_ps(fjz1,tz);
1160 /**************************
1161 * CALCULATE INTERACTIONS *
1162 **************************/
1164 r22 = _mm_mul_ps(rsq22,rinv22);
1165 r22 = _mm_andnot_ps(dummy_mask,r22);
1167 /* EWALD ELECTROSTATICS */
1169 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1170 ewrt = _mm_mul_ps(r22,ewtabscale);
1171 ewitab = _mm_cvttps_epi32(ewrt);
1172 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1173 ewitab = _mm_slli_epi32(ewitab,2);
1174 ewtabF = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,0) );
1175 ewtabD = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,1) );
1176 ewtabV = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,2) );
1177 ewtabFn = _mm_load_ps( ewtab + gmx_mm_extract_epi32(ewitab,3) );
1178 _MM_TRANSPOSE4_PS(ewtabF,ewtabD,ewtabV,ewtabFn);
1179 felec = _mm_add_ps(ewtabF,_mm_mul_ps(eweps,ewtabD));
1180 velec = _mm_sub_ps(ewtabV,_mm_mul_ps(_mm_mul_ps(ewtabhalfspace,eweps),_mm_add_ps(ewtabF,felec)));
1181 velec = _mm_mul_ps(qq22,_mm_sub_ps(rinv22,velec));
1182 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
1184 /* Update potential sum for this i atom from the interaction with this j atom. */
1185 velec = _mm_andnot_ps(dummy_mask,velec);
1186 velecsum = _mm_add_ps(velecsum,velec);
1190 fscal = _mm_andnot_ps(dummy_mask,fscal);
1192 /* Calculate temporary vectorial force */
1193 tx = _mm_mul_ps(fscal,dx22);
1194 ty = _mm_mul_ps(fscal,dy22);
1195 tz = _mm_mul_ps(fscal,dz22);
1197 /* Update vectorial force */
1198 fix2 = _mm_add_ps(fix2,tx);
1199 fiy2 = _mm_add_ps(fiy2,ty);
1200 fiz2 = _mm_add_ps(fiz2,tz);
1202 fjx2 = _mm_add_ps(fjx2,tx);
1203 fjy2 = _mm_add_ps(fjy2,ty);
1204 fjz2 = _mm_add_ps(fjz2,tz);
1206 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
1207 f+j_coord_offsetC,f+j_coord_offsetD,
1208 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1210 /* Inner loop uses 390 flops */
1213 /* End of innermost loop */
1215 gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
1216 f+i_coord_offset,fshift+i_shift_offset);
1219 /* Update potential energies */
1220 gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
1221 gmx_mm_update_1pot_ps(vvdwsum,kernel_data->energygrp_vdw+ggid);
1223 /* Increment number of inner iterations */
1224 inneriter += j_index_end - j_index_start;
1226 /* Outer loop uses 29 flops */
1229 /* Increment number of outer iterations */
1232 /* Update outer/inner flops */
1234 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_VF,outeriter*29 + inneriter*390);
1237 * Gromacs nonbonded kernel: nb_kernel_ElecEw_VdwLJ_GeomW3W3_F_sse2_single
1238 * Electrostatics interaction: Ewald
1239 * VdW interaction: LennardJones
1240 * Geometry: Water3-Water3
1241 * Calculate force/pot: Force
1244 nb_kernel_ElecEw_VdwLJ_GeomW3W3_F_sse2_single
1245 (t_nblist * gmx_restrict nlist,
1246 rvec * gmx_restrict xx,
1247 rvec * gmx_restrict ff,
1248 t_forcerec * gmx_restrict fr,
1249 t_mdatoms * gmx_restrict mdatoms,
1250 nb_kernel_data_t * gmx_restrict kernel_data,
1251 t_nrnb * gmx_restrict nrnb)
1253 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1254 * just 0 for non-waters.
1255 * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
1256 * jnr indices corresponding to data put in the four positions in the SIMD register.
1258 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1259 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1260 int jnrA,jnrB,jnrC,jnrD;
1261 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1262 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1263 real shX,shY,shZ,rcutoff_scalar;
1264 real *shiftvec,*fshift,*x,*f;
1265 __m128 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1267 __m128 ix0,iy0,iz0,fix0,fiy0,fiz0,iq0,isai0;
1269 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1271 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1272 int vdwjidx0A,vdwjidx0B,vdwjidx0C,vdwjidx0D;
1273 __m128 jx0,jy0,jz0,fjx0,fjy0,fjz0,jq0,isaj0;
1274 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
1275 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1276 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
1277 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1278 __m128 dx00,dy00,dz00,rsq00,rinv00,rinvsq00,r00,qq00,c6_00,c12_00;
1279 __m128 dx01,dy01,dz01,rsq01,rinv01,rinvsq01,r01,qq01,c6_01,c12_01;
1280 __m128 dx02,dy02,dz02,rsq02,rinv02,rinvsq02,r02,qq02,c6_02,c12_02;
1281 __m128 dx10,dy10,dz10,rsq10,rinv10,rinvsq10,r10,qq10,c6_10,c12_10;
1282 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1283 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1284 __m128 dx20,dy20,dz20,rsq20,rinv20,rinvsq20,r20,qq20,c6_20,c12_20;
1285 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1286 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1287 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
1290 __m128 rinvsix,rvdw,vvdw,vvdw6,vvdw12,fvdw,fvdw6,fvdw12,vvdwsum,sh_vdw_invrcut6;
1293 __m128 one_sixth = _mm_set1_ps(1.0/6.0);
1294 __m128 one_twelfth = _mm_set1_ps(1.0/12.0);
1296 __m128 ewtabscale,eweps,sh_ewald,ewrt,ewtabhalfspace,ewtabF,ewtabFn,ewtabD,ewtabV;
1298 __m128 dummy_mask,cutoff_mask;
1299 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
1300 __m128 one = _mm_set1_ps(1.0);
1301 __m128 two = _mm_set1_ps(2.0);
1307 jindex = nlist->jindex;
1309 shiftidx = nlist->shift;
1311 shiftvec = fr->shift_vec[0];
1312 fshift = fr->fshift[0];
1313 facel = _mm_set1_ps(fr->epsfac);
1314 charge = mdatoms->chargeA;
1315 nvdwtype = fr->ntype;
1316 vdwparam = fr->nbfp;
1317 vdwtype = mdatoms->typeA;
1319 sh_ewald = _mm_set1_ps(fr->ic->sh_ewald);
1320 ewtab = fr->ic->tabq_coul_F;
1321 ewtabscale = _mm_set1_ps(fr->ic->tabq_scale);
1322 ewtabhalfspace = _mm_set1_ps(0.5/fr->ic->tabq_scale);
1324 /* Setup water-specific parameters */
1325 inr = nlist->iinr[0];
1326 iq0 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+0]));
1327 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
1328 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
1329 vdwioffset0 = 2*nvdwtype*vdwtype[inr+0];
1331 jq0 = _mm_set1_ps(charge[inr+0]);
1332 jq1 = _mm_set1_ps(charge[inr+1]);
1333 jq2 = _mm_set1_ps(charge[inr+2]);
1334 vdwjidx0A = 2*vdwtype[inr+0];
1335 qq00 = _mm_mul_ps(iq0,jq0);
1336 c6_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A]);
1337 c12_00 = _mm_set1_ps(vdwparam[vdwioffset0+vdwjidx0A+1]);
1338 qq01 = _mm_mul_ps(iq0,jq1);
1339 qq02 = _mm_mul_ps(iq0,jq2);
1340 qq10 = _mm_mul_ps(iq1,jq0);
1341 qq11 = _mm_mul_ps(iq1,jq1);
1342 qq12 = _mm_mul_ps(iq1,jq2);
1343 qq20 = _mm_mul_ps(iq2,jq0);
1344 qq21 = _mm_mul_ps(iq2,jq1);
1345 qq22 = _mm_mul_ps(iq2,jq2);
1347 /* Avoid stupid compiler warnings */
1348 jnrA = jnrB = jnrC = jnrD = 0;
1349 j_coord_offsetA = 0;
1350 j_coord_offsetB = 0;
1351 j_coord_offsetC = 0;
1352 j_coord_offsetD = 0;
1357 /* Start outer loop over neighborlists */
1358 for(iidx=0; iidx<nri; iidx++)
1360 /* Load shift vector for this list */
1361 i_shift_offset = DIM*shiftidx[iidx];
1362 shX = shiftvec[i_shift_offset+XX];
1363 shY = shiftvec[i_shift_offset+YY];
1364 shZ = shiftvec[i_shift_offset+ZZ];
1366 /* Load limits for loop over neighbors */
1367 j_index_start = jindex[iidx];
1368 j_index_end = jindex[iidx+1];
1370 /* Get outer coordinate index */
1372 i_coord_offset = DIM*inr;
1374 /* Load i particle coords and add shift vector */
1375 ix0 = _mm_set1_ps(shX + x[i_coord_offset+DIM*0+XX]);
1376 iy0 = _mm_set1_ps(shY + x[i_coord_offset+DIM*0+YY]);
1377 iz0 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*0+ZZ]);
1378 ix1 = _mm_set1_ps(shX + x[i_coord_offset+DIM*1+XX]);
1379 iy1 = _mm_set1_ps(shY + x[i_coord_offset+DIM*1+YY]);
1380 iz1 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*1+ZZ]);
1381 ix2 = _mm_set1_ps(shX + x[i_coord_offset+DIM*2+XX]);
1382 iy2 = _mm_set1_ps(shY + x[i_coord_offset+DIM*2+YY]);
1383 iz2 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*2+ZZ]);
1385 fix0 = _mm_setzero_ps();
1386 fiy0 = _mm_setzero_ps();
1387 fiz0 = _mm_setzero_ps();
1388 fix1 = _mm_setzero_ps();
1389 fiy1 = _mm_setzero_ps();
1390 fiz1 = _mm_setzero_ps();
1391 fix2 = _mm_setzero_ps();
1392 fiy2 = _mm_setzero_ps();
1393 fiz2 = _mm_setzero_ps();
1395 /* Start inner kernel loop */
1396 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1399 /* Get j neighbor index, and coordinate index */
1401 jnrB = jjnr[jidx+1];
1402 jnrC = jjnr[jidx+2];
1403 jnrD = jjnr[jidx+3];
1405 j_coord_offsetA = DIM*jnrA;
1406 j_coord_offsetB = DIM*jnrB;
1407 j_coord_offsetC = DIM*jnrC;
1408 j_coord_offsetD = DIM*jnrD;
1410 /* load j atom coordinates */
1411 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1412 x+j_coord_offsetC,x+j_coord_offsetD,
1413 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1415 /* Calculate displacement vector */
1416 dx00 = _mm_sub_ps(ix0,jx0);
1417 dy00 = _mm_sub_ps(iy0,jy0);
1418 dz00 = _mm_sub_ps(iz0,jz0);
1419 dx01 = _mm_sub_ps(ix0,jx1);
1420 dy01 = _mm_sub_ps(iy0,jy1);
1421 dz01 = _mm_sub_ps(iz0,jz1);
1422 dx02 = _mm_sub_ps(ix0,jx2);
1423 dy02 = _mm_sub_ps(iy0,jy2);
1424 dz02 = _mm_sub_ps(iz0,jz2);
1425 dx10 = _mm_sub_ps(ix1,jx0);
1426 dy10 = _mm_sub_ps(iy1,jy0);
1427 dz10 = _mm_sub_ps(iz1,jz0);
1428 dx11 = _mm_sub_ps(ix1,jx1);
1429 dy11 = _mm_sub_ps(iy1,jy1);
1430 dz11 = _mm_sub_ps(iz1,jz1);
1431 dx12 = _mm_sub_ps(ix1,jx2);
1432 dy12 = _mm_sub_ps(iy1,jy2);
1433 dz12 = _mm_sub_ps(iz1,jz2);
1434 dx20 = _mm_sub_ps(ix2,jx0);
1435 dy20 = _mm_sub_ps(iy2,jy0);
1436 dz20 = _mm_sub_ps(iz2,jz0);
1437 dx21 = _mm_sub_ps(ix2,jx1);
1438 dy21 = _mm_sub_ps(iy2,jy1);
1439 dz21 = _mm_sub_ps(iz2,jz1);
1440 dx22 = _mm_sub_ps(ix2,jx2);
1441 dy22 = _mm_sub_ps(iy2,jy2);
1442 dz22 = _mm_sub_ps(iz2,jz2);
1444 /* Calculate squared distance and things based on it */
1445 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1446 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1447 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1448 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1449 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1450 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1451 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1452 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1453 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1455 rinv00 = gmx_mm_invsqrt_ps(rsq00);
1456 rinv01 = gmx_mm_invsqrt_ps(rsq01);
1457 rinv02 = gmx_mm_invsqrt_ps(rsq02);
1458 rinv10 = gmx_mm_invsqrt_ps(rsq10);
1459 rinv11 = gmx_mm_invsqrt_ps(rsq11);
1460 rinv12 = gmx_mm_invsqrt_ps(rsq12);
1461 rinv20 = gmx_mm_invsqrt_ps(rsq20);
1462 rinv21 = gmx_mm_invsqrt_ps(rsq21);
1463 rinv22 = gmx_mm_invsqrt_ps(rsq22);
1465 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
1466 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
1467 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
1468 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
1469 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1470 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1471 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
1472 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
1473 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
1475 fjx0 = _mm_setzero_ps();
1476 fjy0 = _mm_setzero_ps();
1477 fjz0 = _mm_setzero_ps();
1478 fjx1 = _mm_setzero_ps();
1479 fjy1 = _mm_setzero_ps();
1480 fjz1 = _mm_setzero_ps();
1481 fjx2 = _mm_setzero_ps();
1482 fjy2 = _mm_setzero_ps();
1483 fjz2 = _mm_setzero_ps();
1485 /**************************
1486 * CALCULATE INTERACTIONS *
1487 **************************/
1489 r00 = _mm_mul_ps(rsq00,rinv00);
1491 /* EWALD ELECTROSTATICS */
1493 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1494 ewrt = _mm_mul_ps(r00,ewtabscale);
1495 ewitab = _mm_cvttps_epi32(ewrt);
1496 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1497 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1498 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1500 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1501 felec = _mm_mul_ps(_mm_mul_ps(qq00,rinv00),_mm_sub_ps(rinvsq00,felec));
1503 /* LENNARD-JONES DISPERSION/REPULSION */
1505 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
1506 fvdw = _mm_mul_ps(_mm_sub_ps(_mm_mul_ps(c12_00,rinvsix),c6_00),_mm_mul_ps(rinvsix,rinvsq00));
1508 fscal = _mm_add_ps(felec,fvdw);
1510 /* Calculate temporary vectorial force */
1511 tx = _mm_mul_ps(fscal,dx00);
1512 ty = _mm_mul_ps(fscal,dy00);
1513 tz = _mm_mul_ps(fscal,dz00);
1515 /* Update vectorial force */
1516 fix0 = _mm_add_ps(fix0,tx);
1517 fiy0 = _mm_add_ps(fiy0,ty);
1518 fiz0 = _mm_add_ps(fiz0,tz);
1520 fjx0 = _mm_add_ps(fjx0,tx);
1521 fjy0 = _mm_add_ps(fjy0,ty);
1522 fjz0 = _mm_add_ps(fjz0,tz);
1524 /**************************
1525 * CALCULATE INTERACTIONS *
1526 **************************/
1528 r01 = _mm_mul_ps(rsq01,rinv01);
1530 /* EWALD ELECTROSTATICS */
1532 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1533 ewrt = _mm_mul_ps(r01,ewtabscale);
1534 ewitab = _mm_cvttps_epi32(ewrt);
1535 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1536 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1537 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1539 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1540 felec = _mm_mul_ps(_mm_mul_ps(qq01,rinv01),_mm_sub_ps(rinvsq01,felec));
1544 /* Calculate temporary vectorial force */
1545 tx = _mm_mul_ps(fscal,dx01);
1546 ty = _mm_mul_ps(fscal,dy01);
1547 tz = _mm_mul_ps(fscal,dz01);
1549 /* Update vectorial force */
1550 fix0 = _mm_add_ps(fix0,tx);
1551 fiy0 = _mm_add_ps(fiy0,ty);
1552 fiz0 = _mm_add_ps(fiz0,tz);
1554 fjx1 = _mm_add_ps(fjx1,tx);
1555 fjy1 = _mm_add_ps(fjy1,ty);
1556 fjz1 = _mm_add_ps(fjz1,tz);
1558 /**************************
1559 * CALCULATE INTERACTIONS *
1560 **************************/
1562 r02 = _mm_mul_ps(rsq02,rinv02);
1564 /* EWALD ELECTROSTATICS */
1566 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1567 ewrt = _mm_mul_ps(r02,ewtabscale);
1568 ewitab = _mm_cvttps_epi32(ewrt);
1569 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1570 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1571 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1573 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1574 felec = _mm_mul_ps(_mm_mul_ps(qq02,rinv02),_mm_sub_ps(rinvsq02,felec));
1578 /* Calculate temporary vectorial force */
1579 tx = _mm_mul_ps(fscal,dx02);
1580 ty = _mm_mul_ps(fscal,dy02);
1581 tz = _mm_mul_ps(fscal,dz02);
1583 /* Update vectorial force */
1584 fix0 = _mm_add_ps(fix0,tx);
1585 fiy0 = _mm_add_ps(fiy0,ty);
1586 fiz0 = _mm_add_ps(fiz0,tz);
1588 fjx2 = _mm_add_ps(fjx2,tx);
1589 fjy2 = _mm_add_ps(fjy2,ty);
1590 fjz2 = _mm_add_ps(fjz2,tz);
1592 /**************************
1593 * CALCULATE INTERACTIONS *
1594 **************************/
1596 r10 = _mm_mul_ps(rsq10,rinv10);
1598 /* EWALD ELECTROSTATICS */
1600 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1601 ewrt = _mm_mul_ps(r10,ewtabscale);
1602 ewitab = _mm_cvttps_epi32(ewrt);
1603 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1604 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1605 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1607 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1608 felec = _mm_mul_ps(_mm_mul_ps(qq10,rinv10),_mm_sub_ps(rinvsq10,felec));
1612 /* Calculate temporary vectorial force */
1613 tx = _mm_mul_ps(fscal,dx10);
1614 ty = _mm_mul_ps(fscal,dy10);
1615 tz = _mm_mul_ps(fscal,dz10);
1617 /* Update vectorial force */
1618 fix1 = _mm_add_ps(fix1,tx);
1619 fiy1 = _mm_add_ps(fiy1,ty);
1620 fiz1 = _mm_add_ps(fiz1,tz);
1622 fjx0 = _mm_add_ps(fjx0,tx);
1623 fjy0 = _mm_add_ps(fjy0,ty);
1624 fjz0 = _mm_add_ps(fjz0,tz);
1626 /**************************
1627 * CALCULATE INTERACTIONS *
1628 **************************/
1630 r11 = _mm_mul_ps(rsq11,rinv11);
1632 /* EWALD ELECTROSTATICS */
1634 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1635 ewrt = _mm_mul_ps(r11,ewtabscale);
1636 ewitab = _mm_cvttps_epi32(ewrt);
1637 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1638 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1639 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1641 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1642 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
1646 /* Calculate temporary vectorial force */
1647 tx = _mm_mul_ps(fscal,dx11);
1648 ty = _mm_mul_ps(fscal,dy11);
1649 tz = _mm_mul_ps(fscal,dz11);
1651 /* Update vectorial force */
1652 fix1 = _mm_add_ps(fix1,tx);
1653 fiy1 = _mm_add_ps(fiy1,ty);
1654 fiz1 = _mm_add_ps(fiz1,tz);
1656 fjx1 = _mm_add_ps(fjx1,tx);
1657 fjy1 = _mm_add_ps(fjy1,ty);
1658 fjz1 = _mm_add_ps(fjz1,tz);
1660 /**************************
1661 * CALCULATE INTERACTIONS *
1662 **************************/
1664 r12 = _mm_mul_ps(rsq12,rinv12);
1666 /* EWALD ELECTROSTATICS */
1668 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1669 ewrt = _mm_mul_ps(r12,ewtabscale);
1670 ewitab = _mm_cvttps_epi32(ewrt);
1671 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1672 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1673 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1675 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1676 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
1680 /* Calculate temporary vectorial force */
1681 tx = _mm_mul_ps(fscal,dx12);
1682 ty = _mm_mul_ps(fscal,dy12);
1683 tz = _mm_mul_ps(fscal,dz12);
1685 /* Update vectorial force */
1686 fix1 = _mm_add_ps(fix1,tx);
1687 fiy1 = _mm_add_ps(fiy1,ty);
1688 fiz1 = _mm_add_ps(fiz1,tz);
1690 fjx2 = _mm_add_ps(fjx2,tx);
1691 fjy2 = _mm_add_ps(fjy2,ty);
1692 fjz2 = _mm_add_ps(fjz2,tz);
1694 /**************************
1695 * CALCULATE INTERACTIONS *
1696 **************************/
1698 r20 = _mm_mul_ps(rsq20,rinv20);
1700 /* EWALD ELECTROSTATICS */
1702 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1703 ewrt = _mm_mul_ps(r20,ewtabscale);
1704 ewitab = _mm_cvttps_epi32(ewrt);
1705 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1706 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1707 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1709 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1710 felec = _mm_mul_ps(_mm_mul_ps(qq20,rinv20),_mm_sub_ps(rinvsq20,felec));
1714 /* Calculate temporary vectorial force */
1715 tx = _mm_mul_ps(fscal,dx20);
1716 ty = _mm_mul_ps(fscal,dy20);
1717 tz = _mm_mul_ps(fscal,dz20);
1719 /* Update vectorial force */
1720 fix2 = _mm_add_ps(fix2,tx);
1721 fiy2 = _mm_add_ps(fiy2,ty);
1722 fiz2 = _mm_add_ps(fiz2,tz);
1724 fjx0 = _mm_add_ps(fjx0,tx);
1725 fjy0 = _mm_add_ps(fjy0,ty);
1726 fjz0 = _mm_add_ps(fjz0,tz);
1728 /**************************
1729 * CALCULATE INTERACTIONS *
1730 **************************/
1732 r21 = _mm_mul_ps(rsq21,rinv21);
1734 /* EWALD ELECTROSTATICS */
1736 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1737 ewrt = _mm_mul_ps(r21,ewtabscale);
1738 ewitab = _mm_cvttps_epi32(ewrt);
1739 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1740 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1741 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1743 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1744 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
1748 /* Calculate temporary vectorial force */
1749 tx = _mm_mul_ps(fscal,dx21);
1750 ty = _mm_mul_ps(fscal,dy21);
1751 tz = _mm_mul_ps(fscal,dz21);
1753 /* Update vectorial force */
1754 fix2 = _mm_add_ps(fix2,tx);
1755 fiy2 = _mm_add_ps(fiy2,ty);
1756 fiz2 = _mm_add_ps(fiz2,tz);
1758 fjx1 = _mm_add_ps(fjx1,tx);
1759 fjy1 = _mm_add_ps(fjy1,ty);
1760 fjz1 = _mm_add_ps(fjz1,tz);
1762 /**************************
1763 * CALCULATE INTERACTIONS *
1764 **************************/
1766 r22 = _mm_mul_ps(rsq22,rinv22);
1768 /* EWALD ELECTROSTATICS */
1770 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1771 ewrt = _mm_mul_ps(r22,ewtabscale);
1772 ewitab = _mm_cvttps_epi32(ewrt);
1773 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1774 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1775 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1777 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1778 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
1782 /* Calculate temporary vectorial force */
1783 tx = _mm_mul_ps(fscal,dx22);
1784 ty = _mm_mul_ps(fscal,dy22);
1785 tz = _mm_mul_ps(fscal,dz22);
1787 /* Update vectorial force */
1788 fix2 = _mm_add_ps(fix2,tx);
1789 fiy2 = _mm_add_ps(fiy2,ty);
1790 fiz2 = _mm_add_ps(fiz2,tz);
1792 fjx2 = _mm_add_ps(fjx2,tx);
1793 fjy2 = _mm_add_ps(fjy2,ty);
1794 fjz2 = _mm_add_ps(fjz2,tz);
1796 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
1797 f+j_coord_offsetC,f+j_coord_offsetD,
1798 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
1800 /* Inner loop uses 331 flops */
1803 if(jidx<j_index_end)
1806 /* Get j neighbor index, and coordinate index */
1808 jnrB = jjnr[jidx+1];
1809 jnrC = jjnr[jidx+2];
1810 jnrD = jjnr[jidx+3];
1812 /* Sign of each element will be negative for non-real atoms.
1813 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1814 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
1816 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1817 jnrA = (jnrA>=0) ? jnrA : 0;
1818 jnrB = (jnrB>=0) ? jnrB : 0;
1819 jnrC = (jnrC>=0) ? jnrC : 0;
1820 jnrD = (jnrD>=0) ? jnrD : 0;
1822 j_coord_offsetA = DIM*jnrA;
1823 j_coord_offsetB = DIM*jnrB;
1824 j_coord_offsetC = DIM*jnrC;
1825 j_coord_offsetD = DIM*jnrD;
1827 /* load j atom coordinates */
1828 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA,x+j_coord_offsetB,
1829 x+j_coord_offsetC,x+j_coord_offsetD,
1830 &jx0,&jy0,&jz0,&jx1,&jy1,&jz1,&jx2,&jy2,&jz2);
1832 /* Calculate displacement vector */
1833 dx00 = _mm_sub_ps(ix0,jx0);
1834 dy00 = _mm_sub_ps(iy0,jy0);
1835 dz00 = _mm_sub_ps(iz0,jz0);
1836 dx01 = _mm_sub_ps(ix0,jx1);
1837 dy01 = _mm_sub_ps(iy0,jy1);
1838 dz01 = _mm_sub_ps(iz0,jz1);
1839 dx02 = _mm_sub_ps(ix0,jx2);
1840 dy02 = _mm_sub_ps(iy0,jy2);
1841 dz02 = _mm_sub_ps(iz0,jz2);
1842 dx10 = _mm_sub_ps(ix1,jx0);
1843 dy10 = _mm_sub_ps(iy1,jy0);
1844 dz10 = _mm_sub_ps(iz1,jz0);
1845 dx11 = _mm_sub_ps(ix1,jx1);
1846 dy11 = _mm_sub_ps(iy1,jy1);
1847 dz11 = _mm_sub_ps(iz1,jz1);
1848 dx12 = _mm_sub_ps(ix1,jx2);
1849 dy12 = _mm_sub_ps(iy1,jy2);
1850 dz12 = _mm_sub_ps(iz1,jz2);
1851 dx20 = _mm_sub_ps(ix2,jx0);
1852 dy20 = _mm_sub_ps(iy2,jy0);
1853 dz20 = _mm_sub_ps(iz2,jz0);
1854 dx21 = _mm_sub_ps(ix2,jx1);
1855 dy21 = _mm_sub_ps(iy2,jy1);
1856 dz21 = _mm_sub_ps(iz2,jz1);
1857 dx22 = _mm_sub_ps(ix2,jx2);
1858 dy22 = _mm_sub_ps(iy2,jy2);
1859 dz22 = _mm_sub_ps(iz2,jz2);
1861 /* Calculate squared distance and things based on it */
1862 rsq00 = gmx_mm_calc_rsq_ps(dx00,dy00,dz00);
1863 rsq01 = gmx_mm_calc_rsq_ps(dx01,dy01,dz01);
1864 rsq02 = gmx_mm_calc_rsq_ps(dx02,dy02,dz02);
1865 rsq10 = gmx_mm_calc_rsq_ps(dx10,dy10,dz10);
1866 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1867 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1868 rsq20 = gmx_mm_calc_rsq_ps(dx20,dy20,dz20);
1869 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1870 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1872 rinv00 = gmx_mm_invsqrt_ps(rsq00);
1873 rinv01 = gmx_mm_invsqrt_ps(rsq01);
1874 rinv02 = gmx_mm_invsqrt_ps(rsq02);
1875 rinv10 = gmx_mm_invsqrt_ps(rsq10);
1876 rinv11 = gmx_mm_invsqrt_ps(rsq11);
1877 rinv12 = gmx_mm_invsqrt_ps(rsq12);
1878 rinv20 = gmx_mm_invsqrt_ps(rsq20);
1879 rinv21 = gmx_mm_invsqrt_ps(rsq21);
1880 rinv22 = gmx_mm_invsqrt_ps(rsq22);
1882 rinvsq00 = _mm_mul_ps(rinv00,rinv00);
1883 rinvsq01 = _mm_mul_ps(rinv01,rinv01);
1884 rinvsq02 = _mm_mul_ps(rinv02,rinv02);
1885 rinvsq10 = _mm_mul_ps(rinv10,rinv10);
1886 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1887 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1888 rinvsq20 = _mm_mul_ps(rinv20,rinv20);
1889 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
1890 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
1892 fjx0 = _mm_setzero_ps();
1893 fjy0 = _mm_setzero_ps();
1894 fjz0 = _mm_setzero_ps();
1895 fjx1 = _mm_setzero_ps();
1896 fjy1 = _mm_setzero_ps();
1897 fjz1 = _mm_setzero_ps();
1898 fjx2 = _mm_setzero_ps();
1899 fjy2 = _mm_setzero_ps();
1900 fjz2 = _mm_setzero_ps();
1902 /**************************
1903 * CALCULATE INTERACTIONS *
1904 **************************/
1906 r00 = _mm_mul_ps(rsq00,rinv00);
1907 r00 = _mm_andnot_ps(dummy_mask,r00);
1909 /* EWALD ELECTROSTATICS */
1911 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1912 ewrt = _mm_mul_ps(r00,ewtabscale);
1913 ewitab = _mm_cvttps_epi32(ewrt);
1914 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1915 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1916 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1918 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1919 felec = _mm_mul_ps(_mm_mul_ps(qq00,rinv00),_mm_sub_ps(rinvsq00,felec));
1921 /* LENNARD-JONES DISPERSION/REPULSION */
1923 rinvsix = _mm_mul_ps(_mm_mul_ps(rinvsq00,rinvsq00),rinvsq00);
1924 fvdw = _mm_mul_ps(_mm_sub_ps(_mm_mul_ps(c12_00,rinvsix),c6_00),_mm_mul_ps(rinvsix,rinvsq00));
1926 fscal = _mm_add_ps(felec,fvdw);
1928 fscal = _mm_andnot_ps(dummy_mask,fscal);
1930 /* Calculate temporary vectorial force */
1931 tx = _mm_mul_ps(fscal,dx00);
1932 ty = _mm_mul_ps(fscal,dy00);
1933 tz = _mm_mul_ps(fscal,dz00);
1935 /* Update vectorial force */
1936 fix0 = _mm_add_ps(fix0,tx);
1937 fiy0 = _mm_add_ps(fiy0,ty);
1938 fiz0 = _mm_add_ps(fiz0,tz);
1940 fjx0 = _mm_add_ps(fjx0,tx);
1941 fjy0 = _mm_add_ps(fjy0,ty);
1942 fjz0 = _mm_add_ps(fjz0,tz);
1944 /**************************
1945 * CALCULATE INTERACTIONS *
1946 **************************/
1948 r01 = _mm_mul_ps(rsq01,rinv01);
1949 r01 = _mm_andnot_ps(dummy_mask,r01);
1951 /* EWALD ELECTROSTATICS */
1953 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1954 ewrt = _mm_mul_ps(r01,ewtabscale);
1955 ewitab = _mm_cvttps_epi32(ewrt);
1956 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1957 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1958 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1960 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1961 felec = _mm_mul_ps(_mm_mul_ps(qq01,rinv01),_mm_sub_ps(rinvsq01,felec));
1965 fscal = _mm_andnot_ps(dummy_mask,fscal);
1967 /* Calculate temporary vectorial force */
1968 tx = _mm_mul_ps(fscal,dx01);
1969 ty = _mm_mul_ps(fscal,dy01);
1970 tz = _mm_mul_ps(fscal,dz01);
1972 /* Update vectorial force */
1973 fix0 = _mm_add_ps(fix0,tx);
1974 fiy0 = _mm_add_ps(fiy0,ty);
1975 fiz0 = _mm_add_ps(fiz0,tz);
1977 fjx1 = _mm_add_ps(fjx1,tx);
1978 fjy1 = _mm_add_ps(fjy1,ty);
1979 fjz1 = _mm_add_ps(fjz1,tz);
1981 /**************************
1982 * CALCULATE INTERACTIONS *
1983 **************************/
1985 r02 = _mm_mul_ps(rsq02,rinv02);
1986 r02 = _mm_andnot_ps(dummy_mask,r02);
1988 /* EWALD ELECTROSTATICS */
1990 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
1991 ewrt = _mm_mul_ps(r02,ewtabscale);
1992 ewitab = _mm_cvttps_epi32(ewrt);
1993 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
1994 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
1995 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
1997 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
1998 felec = _mm_mul_ps(_mm_mul_ps(qq02,rinv02),_mm_sub_ps(rinvsq02,felec));
2002 fscal = _mm_andnot_ps(dummy_mask,fscal);
2004 /* Calculate temporary vectorial force */
2005 tx = _mm_mul_ps(fscal,dx02);
2006 ty = _mm_mul_ps(fscal,dy02);
2007 tz = _mm_mul_ps(fscal,dz02);
2009 /* Update vectorial force */
2010 fix0 = _mm_add_ps(fix0,tx);
2011 fiy0 = _mm_add_ps(fiy0,ty);
2012 fiz0 = _mm_add_ps(fiz0,tz);
2014 fjx2 = _mm_add_ps(fjx2,tx);
2015 fjy2 = _mm_add_ps(fjy2,ty);
2016 fjz2 = _mm_add_ps(fjz2,tz);
2018 /**************************
2019 * CALCULATE INTERACTIONS *
2020 **************************/
2022 r10 = _mm_mul_ps(rsq10,rinv10);
2023 r10 = _mm_andnot_ps(dummy_mask,r10);
2025 /* EWALD ELECTROSTATICS */
2027 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2028 ewrt = _mm_mul_ps(r10,ewtabscale);
2029 ewitab = _mm_cvttps_epi32(ewrt);
2030 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2031 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2032 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2034 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2035 felec = _mm_mul_ps(_mm_mul_ps(qq10,rinv10),_mm_sub_ps(rinvsq10,felec));
2039 fscal = _mm_andnot_ps(dummy_mask,fscal);
2041 /* Calculate temporary vectorial force */
2042 tx = _mm_mul_ps(fscal,dx10);
2043 ty = _mm_mul_ps(fscal,dy10);
2044 tz = _mm_mul_ps(fscal,dz10);
2046 /* Update vectorial force */
2047 fix1 = _mm_add_ps(fix1,tx);
2048 fiy1 = _mm_add_ps(fiy1,ty);
2049 fiz1 = _mm_add_ps(fiz1,tz);
2051 fjx0 = _mm_add_ps(fjx0,tx);
2052 fjy0 = _mm_add_ps(fjy0,ty);
2053 fjz0 = _mm_add_ps(fjz0,tz);
2055 /**************************
2056 * CALCULATE INTERACTIONS *
2057 **************************/
2059 r11 = _mm_mul_ps(rsq11,rinv11);
2060 r11 = _mm_andnot_ps(dummy_mask,r11);
2062 /* EWALD ELECTROSTATICS */
2064 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2065 ewrt = _mm_mul_ps(r11,ewtabscale);
2066 ewitab = _mm_cvttps_epi32(ewrt);
2067 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2068 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2069 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2071 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2072 felec = _mm_mul_ps(_mm_mul_ps(qq11,rinv11),_mm_sub_ps(rinvsq11,felec));
2076 fscal = _mm_andnot_ps(dummy_mask,fscal);
2078 /* Calculate temporary vectorial force */
2079 tx = _mm_mul_ps(fscal,dx11);
2080 ty = _mm_mul_ps(fscal,dy11);
2081 tz = _mm_mul_ps(fscal,dz11);
2083 /* Update vectorial force */
2084 fix1 = _mm_add_ps(fix1,tx);
2085 fiy1 = _mm_add_ps(fiy1,ty);
2086 fiz1 = _mm_add_ps(fiz1,tz);
2088 fjx1 = _mm_add_ps(fjx1,tx);
2089 fjy1 = _mm_add_ps(fjy1,ty);
2090 fjz1 = _mm_add_ps(fjz1,tz);
2092 /**************************
2093 * CALCULATE INTERACTIONS *
2094 **************************/
2096 r12 = _mm_mul_ps(rsq12,rinv12);
2097 r12 = _mm_andnot_ps(dummy_mask,r12);
2099 /* EWALD ELECTROSTATICS */
2101 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2102 ewrt = _mm_mul_ps(r12,ewtabscale);
2103 ewitab = _mm_cvttps_epi32(ewrt);
2104 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2105 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2106 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2108 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2109 felec = _mm_mul_ps(_mm_mul_ps(qq12,rinv12),_mm_sub_ps(rinvsq12,felec));
2113 fscal = _mm_andnot_ps(dummy_mask,fscal);
2115 /* Calculate temporary vectorial force */
2116 tx = _mm_mul_ps(fscal,dx12);
2117 ty = _mm_mul_ps(fscal,dy12);
2118 tz = _mm_mul_ps(fscal,dz12);
2120 /* Update vectorial force */
2121 fix1 = _mm_add_ps(fix1,tx);
2122 fiy1 = _mm_add_ps(fiy1,ty);
2123 fiz1 = _mm_add_ps(fiz1,tz);
2125 fjx2 = _mm_add_ps(fjx2,tx);
2126 fjy2 = _mm_add_ps(fjy2,ty);
2127 fjz2 = _mm_add_ps(fjz2,tz);
2129 /**************************
2130 * CALCULATE INTERACTIONS *
2131 **************************/
2133 r20 = _mm_mul_ps(rsq20,rinv20);
2134 r20 = _mm_andnot_ps(dummy_mask,r20);
2136 /* EWALD ELECTROSTATICS */
2138 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2139 ewrt = _mm_mul_ps(r20,ewtabscale);
2140 ewitab = _mm_cvttps_epi32(ewrt);
2141 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2142 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2143 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2145 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2146 felec = _mm_mul_ps(_mm_mul_ps(qq20,rinv20),_mm_sub_ps(rinvsq20,felec));
2150 fscal = _mm_andnot_ps(dummy_mask,fscal);
2152 /* Calculate temporary vectorial force */
2153 tx = _mm_mul_ps(fscal,dx20);
2154 ty = _mm_mul_ps(fscal,dy20);
2155 tz = _mm_mul_ps(fscal,dz20);
2157 /* Update vectorial force */
2158 fix2 = _mm_add_ps(fix2,tx);
2159 fiy2 = _mm_add_ps(fiy2,ty);
2160 fiz2 = _mm_add_ps(fiz2,tz);
2162 fjx0 = _mm_add_ps(fjx0,tx);
2163 fjy0 = _mm_add_ps(fjy0,ty);
2164 fjz0 = _mm_add_ps(fjz0,tz);
2166 /**************************
2167 * CALCULATE INTERACTIONS *
2168 **************************/
2170 r21 = _mm_mul_ps(rsq21,rinv21);
2171 r21 = _mm_andnot_ps(dummy_mask,r21);
2173 /* EWALD ELECTROSTATICS */
2175 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2176 ewrt = _mm_mul_ps(r21,ewtabscale);
2177 ewitab = _mm_cvttps_epi32(ewrt);
2178 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2179 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2180 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2182 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2183 felec = _mm_mul_ps(_mm_mul_ps(qq21,rinv21),_mm_sub_ps(rinvsq21,felec));
2187 fscal = _mm_andnot_ps(dummy_mask,fscal);
2189 /* Calculate temporary vectorial force */
2190 tx = _mm_mul_ps(fscal,dx21);
2191 ty = _mm_mul_ps(fscal,dy21);
2192 tz = _mm_mul_ps(fscal,dz21);
2194 /* Update vectorial force */
2195 fix2 = _mm_add_ps(fix2,tx);
2196 fiy2 = _mm_add_ps(fiy2,ty);
2197 fiz2 = _mm_add_ps(fiz2,tz);
2199 fjx1 = _mm_add_ps(fjx1,tx);
2200 fjy1 = _mm_add_ps(fjy1,ty);
2201 fjz1 = _mm_add_ps(fjz1,tz);
2203 /**************************
2204 * CALCULATE INTERACTIONS *
2205 **************************/
2207 r22 = _mm_mul_ps(rsq22,rinv22);
2208 r22 = _mm_andnot_ps(dummy_mask,r22);
2210 /* EWALD ELECTROSTATICS */
2212 /* Calculate Ewald table index by multiplying r with scale and truncate to integer */
2213 ewrt = _mm_mul_ps(r22,ewtabscale);
2214 ewitab = _mm_cvttps_epi32(ewrt);
2215 eweps = _mm_sub_ps(ewrt,_mm_cvtepi32_ps(ewitab));
2216 gmx_mm_load_4pair_swizzle_ps(ewtab+gmx_mm_extract_epi32(ewitab,0),ewtab+gmx_mm_extract_epi32(ewitab,1),
2217 ewtab+gmx_mm_extract_epi32(ewitab,2),ewtab+gmx_mm_extract_epi32(ewitab,3),
2219 felec = _mm_add_ps(_mm_mul_ps( _mm_sub_ps(one,eweps),ewtabF),_mm_mul_ps(eweps,ewtabFn));
2220 felec = _mm_mul_ps(_mm_mul_ps(qq22,rinv22),_mm_sub_ps(rinvsq22,felec));
2224 fscal = _mm_andnot_ps(dummy_mask,fscal);
2226 /* Calculate temporary vectorial force */
2227 tx = _mm_mul_ps(fscal,dx22);
2228 ty = _mm_mul_ps(fscal,dy22);
2229 tz = _mm_mul_ps(fscal,dz22);
2231 /* Update vectorial force */
2232 fix2 = _mm_add_ps(fix2,tx);
2233 fiy2 = _mm_add_ps(fiy2,ty);
2234 fiz2 = _mm_add_ps(fiz2,tz);
2236 fjx2 = _mm_add_ps(fjx2,tx);
2237 fjy2 = _mm_add_ps(fjy2,ty);
2238 fjz2 = _mm_add_ps(fjz2,tz);
2240 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA,f+j_coord_offsetB,
2241 f+j_coord_offsetC,f+j_coord_offsetD,
2242 fjx0,fjy0,fjz0,fjx1,fjy1,fjz1,fjx2,fjy2,fjz2);
2244 /* Inner loop uses 340 flops */
2247 /* End of innermost loop */
2249 gmx_mm_update_iforce_3atom_swizzle_ps(fix0,fiy0,fiz0,fix1,fiy1,fiz1,fix2,fiy2,fiz2,
2250 f+i_coord_offset,fshift+i_shift_offset);
2252 /* Increment number of inner iterations */
2253 inneriter += j_index_end - j_index_start;
2255 /* Outer loop uses 27 flops */
2258 /* Increment number of outer iterations */
2261 /* Update outer/inner flops */
2263 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_VDW_W3W3_F,outeriter*27 + inneriter*340);