2 * Note: this file was generated by the Gromacs sse2_single kernel generator.
4 * This source code is part of
8 * Copyright (c) 2001-2012, The GROMACS Development Team
10 * Gromacs is a library for molecular simulation and trajectory analysis,
11 * written by Erik Lindahl, David van der Spoel, Berk Hess, and others - for
12 * a full list of developers and information, check out http://www.gromacs.org
14 * This program is free software; you can redistribute it and/or modify it under
15 * the terms of the GNU Lesser General Public License as published by the Free
16 * Software Foundation; either version 2 of the License, or (at your option) any
19 * To help fund GROMACS development, we humbly ask that you cite
20 * the papers people have written on it - you can find them on the website.
28 #include "../nb_kernel.h"
29 #include "types/simple.h"
33 #include "gmx_math_x86_sse2_single.h"
34 #include "kernelutil_x86_sse2_single.h"
37 * Gromacs nonbonded kernel: nb_kernel_ElecCoul_VdwNone_GeomW4W4_VF_sse2_single
38 * Electrostatics interaction: Coulomb
39 * VdW interaction: None
40 * Geometry: Water4-Water4
41 * Calculate force/pot: PotentialAndForce
44 nb_kernel_ElecCoul_VdwNone_GeomW4W4_VF_sse2_single
45 (t_nblist * gmx_restrict nlist,
46 rvec * gmx_restrict xx,
47 rvec * gmx_restrict ff,
48 t_forcerec * gmx_restrict fr,
49 t_mdatoms * gmx_restrict mdatoms,
50 nb_kernel_data_t * gmx_restrict kernel_data,
51 t_nrnb * gmx_restrict nrnb)
53 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
54 * just 0 for non-waters.
55 * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
56 * jnr indices corresponding to data put in the four positions in the SIMD register.
58 int i_shift_offset,i_coord_offset,outeriter,inneriter;
59 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
60 int jnrA,jnrB,jnrC,jnrD;
61 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
62 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
63 real shX,shY,shZ,rcutoff_scalar;
64 real *shiftvec,*fshift,*x,*f;
65 __m128 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
67 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
69 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
71 __m128 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
72 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
73 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
74 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
75 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
76 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
77 __m128 jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
78 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
79 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
80 __m128 dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
81 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
82 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
83 __m128 dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
84 __m128 dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
85 __m128 dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
86 __m128 dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
87 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
89 __m128 dummy_mask,cutoff_mask;
90 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
91 __m128 one = _mm_set1_ps(1.0);
92 __m128 two = _mm_set1_ps(2.0);
98 jindex = nlist->jindex;
100 shiftidx = nlist->shift;
102 shiftvec = fr->shift_vec[0];
103 fshift = fr->fshift[0];
104 facel = _mm_set1_ps(fr->epsfac);
105 charge = mdatoms->chargeA;
107 /* Setup water-specific parameters */
108 inr = nlist->iinr[0];
109 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
110 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
111 iq3 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+3]));
113 jq1 = _mm_set1_ps(charge[inr+1]);
114 jq2 = _mm_set1_ps(charge[inr+2]);
115 jq3 = _mm_set1_ps(charge[inr+3]);
116 qq11 = _mm_mul_ps(iq1,jq1);
117 qq12 = _mm_mul_ps(iq1,jq2);
118 qq13 = _mm_mul_ps(iq1,jq3);
119 qq21 = _mm_mul_ps(iq2,jq1);
120 qq22 = _mm_mul_ps(iq2,jq2);
121 qq23 = _mm_mul_ps(iq2,jq3);
122 qq31 = _mm_mul_ps(iq3,jq1);
123 qq32 = _mm_mul_ps(iq3,jq2);
124 qq33 = _mm_mul_ps(iq3,jq3);
126 /* Avoid stupid compiler warnings */
127 jnrA = jnrB = jnrC = jnrD = 0;
136 /* Start outer loop over neighborlists */
137 for(iidx=0; iidx<nri; iidx++)
139 /* Load shift vector for this list */
140 i_shift_offset = DIM*shiftidx[iidx];
141 shX = shiftvec[i_shift_offset+XX];
142 shY = shiftvec[i_shift_offset+YY];
143 shZ = shiftvec[i_shift_offset+ZZ];
145 /* Load limits for loop over neighbors */
146 j_index_start = jindex[iidx];
147 j_index_end = jindex[iidx+1];
149 /* Get outer coordinate index */
151 i_coord_offset = DIM*inr;
153 /* Load i particle coords and add shift vector */
154 ix1 = _mm_set1_ps(shX + x[i_coord_offset+DIM*1+XX]);
155 iy1 = _mm_set1_ps(shY + x[i_coord_offset+DIM*1+YY]);
156 iz1 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*1+ZZ]);
157 ix2 = _mm_set1_ps(shX + x[i_coord_offset+DIM*2+XX]);
158 iy2 = _mm_set1_ps(shY + x[i_coord_offset+DIM*2+YY]);
159 iz2 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*2+ZZ]);
160 ix3 = _mm_set1_ps(shX + x[i_coord_offset+DIM*3+XX]);
161 iy3 = _mm_set1_ps(shY + x[i_coord_offset+DIM*3+YY]);
162 iz3 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*3+ZZ]);
164 fix1 = _mm_setzero_ps();
165 fiy1 = _mm_setzero_ps();
166 fiz1 = _mm_setzero_ps();
167 fix2 = _mm_setzero_ps();
168 fiy2 = _mm_setzero_ps();
169 fiz2 = _mm_setzero_ps();
170 fix3 = _mm_setzero_ps();
171 fiy3 = _mm_setzero_ps();
172 fiz3 = _mm_setzero_ps();
174 /* Reset potential sums */
175 velecsum = _mm_setzero_ps();
177 /* Start inner kernel loop */
178 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
181 /* Get j neighbor index, and coordinate index */
187 j_coord_offsetA = DIM*jnrA;
188 j_coord_offsetB = DIM*jnrB;
189 j_coord_offsetC = DIM*jnrC;
190 j_coord_offsetD = DIM*jnrD;
192 /* load j atom coordinates */
193 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
194 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
195 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
197 /* Calculate displacement vector */
198 dx11 = _mm_sub_ps(ix1,jx1);
199 dy11 = _mm_sub_ps(iy1,jy1);
200 dz11 = _mm_sub_ps(iz1,jz1);
201 dx12 = _mm_sub_ps(ix1,jx2);
202 dy12 = _mm_sub_ps(iy1,jy2);
203 dz12 = _mm_sub_ps(iz1,jz2);
204 dx13 = _mm_sub_ps(ix1,jx3);
205 dy13 = _mm_sub_ps(iy1,jy3);
206 dz13 = _mm_sub_ps(iz1,jz3);
207 dx21 = _mm_sub_ps(ix2,jx1);
208 dy21 = _mm_sub_ps(iy2,jy1);
209 dz21 = _mm_sub_ps(iz2,jz1);
210 dx22 = _mm_sub_ps(ix2,jx2);
211 dy22 = _mm_sub_ps(iy2,jy2);
212 dz22 = _mm_sub_ps(iz2,jz2);
213 dx23 = _mm_sub_ps(ix2,jx3);
214 dy23 = _mm_sub_ps(iy2,jy3);
215 dz23 = _mm_sub_ps(iz2,jz3);
216 dx31 = _mm_sub_ps(ix3,jx1);
217 dy31 = _mm_sub_ps(iy3,jy1);
218 dz31 = _mm_sub_ps(iz3,jz1);
219 dx32 = _mm_sub_ps(ix3,jx2);
220 dy32 = _mm_sub_ps(iy3,jy2);
221 dz32 = _mm_sub_ps(iz3,jz2);
222 dx33 = _mm_sub_ps(ix3,jx3);
223 dy33 = _mm_sub_ps(iy3,jy3);
224 dz33 = _mm_sub_ps(iz3,jz3);
226 /* Calculate squared distance and things based on it */
227 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
228 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
229 rsq13 = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
230 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
231 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
232 rsq23 = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
233 rsq31 = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
234 rsq32 = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
235 rsq33 = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
237 rinv11 = gmx_mm_invsqrt_ps(rsq11);
238 rinv12 = gmx_mm_invsqrt_ps(rsq12);
239 rinv13 = gmx_mm_invsqrt_ps(rsq13);
240 rinv21 = gmx_mm_invsqrt_ps(rsq21);
241 rinv22 = gmx_mm_invsqrt_ps(rsq22);
242 rinv23 = gmx_mm_invsqrt_ps(rsq23);
243 rinv31 = gmx_mm_invsqrt_ps(rsq31);
244 rinv32 = gmx_mm_invsqrt_ps(rsq32);
245 rinv33 = gmx_mm_invsqrt_ps(rsq33);
247 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
248 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
249 rinvsq13 = _mm_mul_ps(rinv13,rinv13);
250 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
251 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
252 rinvsq23 = _mm_mul_ps(rinv23,rinv23);
253 rinvsq31 = _mm_mul_ps(rinv31,rinv31);
254 rinvsq32 = _mm_mul_ps(rinv32,rinv32);
255 rinvsq33 = _mm_mul_ps(rinv33,rinv33);
257 fjx1 = _mm_setzero_ps();
258 fjy1 = _mm_setzero_ps();
259 fjz1 = _mm_setzero_ps();
260 fjx2 = _mm_setzero_ps();
261 fjy2 = _mm_setzero_ps();
262 fjz2 = _mm_setzero_ps();
263 fjx3 = _mm_setzero_ps();
264 fjy3 = _mm_setzero_ps();
265 fjz3 = _mm_setzero_ps();
267 /**************************
268 * CALCULATE INTERACTIONS *
269 **************************/
271 /* COULOMB ELECTROSTATICS */
272 velec = _mm_mul_ps(qq11,rinv11);
273 felec = _mm_mul_ps(velec,rinvsq11);
275 /* Update potential sum for this i atom from the interaction with this j atom. */
276 velecsum = _mm_add_ps(velecsum,velec);
280 /* Calculate temporary vectorial force */
281 tx = _mm_mul_ps(fscal,dx11);
282 ty = _mm_mul_ps(fscal,dy11);
283 tz = _mm_mul_ps(fscal,dz11);
285 /* Update vectorial force */
286 fix1 = _mm_add_ps(fix1,tx);
287 fiy1 = _mm_add_ps(fiy1,ty);
288 fiz1 = _mm_add_ps(fiz1,tz);
290 fjx1 = _mm_add_ps(fjx1,tx);
291 fjy1 = _mm_add_ps(fjy1,ty);
292 fjz1 = _mm_add_ps(fjz1,tz);
294 /**************************
295 * CALCULATE INTERACTIONS *
296 **************************/
298 /* COULOMB ELECTROSTATICS */
299 velec = _mm_mul_ps(qq12,rinv12);
300 felec = _mm_mul_ps(velec,rinvsq12);
302 /* Update potential sum for this i atom from the interaction with this j atom. */
303 velecsum = _mm_add_ps(velecsum,velec);
307 /* Calculate temporary vectorial force */
308 tx = _mm_mul_ps(fscal,dx12);
309 ty = _mm_mul_ps(fscal,dy12);
310 tz = _mm_mul_ps(fscal,dz12);
312 /* Update vectorial force */
313 fix1 = _mm_add_ps(fix1,tx);
314 fiy1 = _mm_add_ps(fiy1,ty);
315 fiz1 = _mm_add_ps(fiz1,tz);
317 fjx2 = _mm_add_ps(fjx2,tx);
318 fjy2 = _mm_add_ps(fjy2,ty);
319 fjz2 = _mm_add_ps(fjz2,tz);
321 /**************************
322 * CALCULATE INTERACTIONS *
323 **************************/
325 /* COULOMB ELECTROSTATICS */
326 velec = _mm_mul_ps(qq13,rinv13);
327 felec = _mm_mul_ps(velec,rinvsq13);
329 /* Update potential sum for this i atom from the interaction with this j atom. */
330 velecsum = _mm_add_ps(velecsum,velec);
334 /* Calculate temporary vectorial force */
335 tx = _mm_mul_ps(fscal,dx13);
336 ty = _mm_mul_ps(fscal,dy13);
337 tz = _mm_mul_ps(fscal,dz13);
339 /* Update vectorial force */
340 fix1 = _mm_add_ps(fix1,tx);
341 fiy1 = _mm_add_ps(fiy1,ty);
342 fiz1 = _mm_add_ps(fiz1,tz);
344 fjx3 = _mm_add_ps(fjx3,tx);
345 fjy3 = _mm_add_ps(fjy3,ty);
346 fjz3 = _mm_add_ps(fjz3,tz);
348 /**************************
349 * CALCULATE INTERACTIONS *
350 **************************/
352 /* COULOMB ELECTROSTATICS */
353 velec = _mm_mul_ps(qq21,rinv21);
354 felec = _mm_mul_ps(velec,rinvsq21);
356 /* Update potential sum for this i atom from the interaction with this j atom. */
357 velecsum = _mm_add_ps(velecsum,velec);
361 /* Calculate temporary vectorial force */
362 tx = _mm_mul_ps(fscal,dx21);
363 ty = _mm_mul_ps(fscal,dy21);
364 tz = _mm_mul_ps(fscal,dz21);
366 /* Update vectorial force */
367 fix2 = _mm_add_ps(fix2,tx);
368 fiy2 = _mm_add_ps(fiy2,ty);
369 fiz2 = _mm_add_ps(fiz2,tz);
371 fjx1 = _mm_add_ps(fjx1,tx);
372 fjy1 = _mm_add_ps(fjy1,ty);
373 fjz1 = _mm_add_ps(fjz1,tz);
375 /**************************
376 * CALCULATE INTERACTIONS *
377 **************************/
379 /* COULOMB ELECTROSTATICS */
380 velec = _mm_mul_ps(qq22,rinv22);
381 felec = _mm_mul_ps(velec,rinvsq22);
383 /* Update potential sum for this i atom from the interaction with this j atom. */
384 velecsum = _mm_add_ps(velecsum,velec);
388 /* Calculate temporary vectorial force */
389 tx = _mm_mul_ps(fscal,dx22);
390 ty = _mm_mul_ps(fscal,dy22);
391 tz = _mm_mul_ps(fscal,dz22);
393 /* Update vectorial force */
394 fix2 = _mm_add_ps(fix2,tx);
395 fiy2 = _mm_add_ps(fiy2,ty);
396 fiz2 = _mm_add_ps(fiz2,tz);
398 fjx2 = _mm_add_ps(fjx2,tx);
399 fjy2 = _mm_add_ps(fjy2,ty);
400 fjz2 = _mm_add_ps(fjz2,tz);
402 /**************************
403 * CALCULATE INTERACTIONS *
404 **************************/
406 /* COULOMB ELECTROSTATICS */
407 velec = _mm_mul_ps(qq23,rinv23);
408 felec = _mm_mul_ps(velec,rinvsq23);
410 /* Update potential sum for this i atom from the interaction with this j atom. */
411 velecsum = _mm_add_ps(velecsum,velec);
415 /* Calculate temporary vectorial force */
416 tx = _mm_mul_ps(fscal,dx23);
417 ty = _mm_mul_ps(fscal,dy23);
418 tz = _mm_mul_ps(fscal,dz23);
420 /* Update vectorial force */
421 fix2 = _mm_add_ps(fix2,tx);
422 fiy2 = _mm_add_ps(fiy2,ty);
423 fiz2 = _mm_add_ps(fiz2,tz);
425 fjx3 = _mm_add_ps(fjx3,tx);
426 fjy3 = _mm_add_ps(fjy3,ty);
427 fjz3 = _mm_add_ps(fjz3,tz);
429 /**************************
430 * CALCULATE INTERACTIONS *
431 **************************/
433 /* COULOMB ELECTROSTATICS */
434 velec = _mm_mul_ps(qq31,rinv31);
435 felec = _mm_mul_ps(velec,rinvsq31);
437 /* Update potential sum for this i atom from the interaction with this j atom. */
438 velecsum = _mm_add_ps(velecsum,velec);
442 /* Calculate temporary vectorial force */
443 tx = _mm_mul_ps(fscal,dx31);
444 ty = _mm_mul_ps(fscal,dy31);
445 tz = _mm_mul_ps(fscal,dz31);
447 /* Update vectorial force */
448 fix3 = _mm_add_ps(fix3,tx);
449 fiy3 = _mm_add_ps(fiy3,ty);
450 fiz3 = _mm_add_ps(fiz3,tz);
452 fjx1 = _mm_add_ps(fjx1,tx);
453 fjy1 = _mm_add_ps(fjy1,ty);
454 fjz1 = _mm_add_ps(fjz1,tz);
456 /**************************
457 * CALCULATE INTERACTIONS *
458 **************************/
460 /* COULOMB ELECTROSTATICS */
461 velec = _mm_mul_ps(qq32,rinv32);
462 felec = _mm_mul_ps(velec,rinvsq32);
464 /* Update potential sum for this i atom from the interaction with this j atom. */
465 velecsum = _mm_add_ps(velecsum,velec);
469 /* Calculate temporary vectorial force */
470 tx = _mm_mul_ps(fscal,dx32);
471 ty = _mm_mul_ps(fscal,dy32);
472 tz = _mm_mul_ps(fscal,dz32);
474 /* Update vectorial force */
475 fix3 = _mm_add_ps(fix3,tx);
476 fiy3 = _mm_add_ps(fiy3,ty);
477 fiz3 = _mm_add_ps(fiz3,tz);
479 fjx2 = _mm_add_ps(fjx2,tx);
480 fjy2 = _mm_add_ps(fjy2,ty);
481 fjz2 = _mm_add_ps(fjz2,tz);
483 /**************************
484 * CALCULATE INTERACTIONS *
485 **************************/
487 /* COULOMB ELECTROSTATICS */
488 velec = _mm_mul_ps(qq33,rinv33);
489 felec = _mm_mul_ps(velec,rinvsq33);
491 /* Update potential sum for this i atom from the interaction with this j atom. */
492 velecsum = _mm_add_ps(velecsum,velec);
496 /* Calculate temporary vectorial force */
497 tx = _mm_mul_ps(fscal,dx33);
498 ty = _mm_mul_ps(fscal,dy33);
499 tz = _mm_mul_ps(fscal,dz33);
501 /* Update vectorial force */
502 fix3 = _mm_add_ps(fix3,tx);
503 fiy3 = _mm_add_ps(fiy3,ty);
504 fiz3 = _mm_add_ps(fiz3,tz);
506 fjx3 = _mm_add_ps(fjx3,tx);
507 fjy3 = _mm_add_ps(fjy3,ty);
508 fjz3 = _mm_add_ps(fjz3,tz);
510 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA+DIM,f+j_coord_offsetB+DIM,
511 f+j_coord_offsetC+DIM,f+j_coord_offsetD+DIM,
512 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
514 /* Inner loop uses 252 flops */
520 /* Get j neighbor index, and coordinate index */
526 /* Sign of each element will be negative for non-real atoms.
527 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
528 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
530 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
531 jnrA = (jnrA>=0) ? jnrA : 0;
532 jnrB = (jnrB>=0) ? jnrB : 0;
533 jnrC = (jnrC>=0) ? jnrC : 0;
534 jnrD = (jnrD>=0) ? jnrD : 0;
536 j_coord_offsetA = DIM*jnrA;
537 j_coord_offsetB = DIM*jnrB;
538 j_coord_offsetC = DIM*jnrC;
539 j_coord_offsetD = DIM*jnrD;
541 /* load j atom coordinates */
542 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
543 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
544 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
546 /* Calculate displacement vector */
547 dx11 = _mm_sub_ps(ix1,jx1);
548 dy11 = _mm_sub_ps(iy1,jy1);
549 dz11 = _mm_sub_ps(iz1,jz1);
550 dx12 = _mm_sub_ps(ix1,jx2);
551 dy12 = _mm_sub_ps(iy1,jy2);
552 dz12 = _mm_sub_ps(iz1,jz2);
553 dx13 = _mm_sub_ps(ix1,jx3);
554 dy13 = _mm_sub_ps(iy1,jy3);
555 dz13 = _mm_sub_ps(iz1,jz3);
556 dx21 = _mm_sub_ps(ix2,jx1);
557 dy21 = _mm_sub_ps(iy2,jy1);
558 dz21 = _mm_sub_ps(iz2,jz1);
559 dx22 = _mm_sub_ps(ix2,jx2);
560 dy22 = _mm_sub_ps(iy2,jy2);
561 dz22 = _mm_sub_ps(iz2,jz2);
562 dx23 = _mm_sub_ps(ix2,jx3);
563 dy23 = _mm_sub_ps(iy2,jy3);
564 dz23 = _mm_sub_ps(iz2,jz3);
565 dx31 = _mm_sub_ps(ix3,jx1);
566 dy31 = _mm_sub_ps(iy3,jy1);
567 dz31 = _mm_sub_ps(iz3,jz1);
568 dx32 = _mm_sub_ps(ix3,jx2);
569 dy32 = _mm_sub_ps(iy3,jy2);
570 dz32 = _mm_sub_ps(iz3,jz2);
571 dx33 = _mm_sub_ps(ix3,jx3);
572 dy33 = _mm_sub_ps(iy3,jy3);
573 dz33 = _mm_sub_ps(iz3,jz3);
575 /* Calculate squared distance and things based on it */
576 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
577 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
578 rsq13 = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
579 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
580 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
581 rsq23 = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
582 rsq31 = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
583 rsq32 = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
584 rsq33 = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
586 rinv11 = gmx_mm_invsqrt_ps(rsq11);
587 rinv12 = gmx_mm_invsqrt_ps(rsq12);
588 rinv13 = gmx_mm_invsqrt_ps(rsq13);
589 rinv21 = gmx_mm_invsqrt_ps(rsq21);
590 rinv22 = gmx_mm_invsqrt_ps(rsq22);
591 rinv23 = gmx_mm_invsqrt_ps(rsq23);
592 rinv31 = gmx_mm_invsqrt_ps(rsq31);
593 rinv32 = gmx_mm_invsqrt_ps(rsq32);
594 rinv33 = gmx_mm_invsqrt_ps(rsq33);
596 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
597 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
598 rinvsq13 = _mm_mul_ps(rinv13,rinv13);
599 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
600 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
601 rinvsq23 = _mm_mul_ps(rinv23,rinv23);
602 rinvsq31 = _mm_mul_ps(rinv31,rinv31);
603 rinvsq32 = _mm_mul_ps(rinv32,rinv32);
604 rinvsq33 = _mm_mul_ps(rinv33,rinv33);
606 fjx1 = _mm_setzero_ps();
607 fjy1 = _mm_setzero_ps();
608 fjz1 = _mm_setzero_ps();
609 fjx2 = _mm_setzero_ps();
610 fjy2 = _mm_setzero_ps();
611 fjz2 = _mm_setzero_ps();
612 fjx3 = _mm_setzero_ps();
613 fjy3 = _mm_setzero_ps();
614 fjz3 = _mm_setzero_ps();
616 /**************************
617 * CALCULATE INTERACTIONS *
618 **************************/
620 /* COULOMB ELECTROSTATICS */
621 velec = _mm_mul_ps(qq11,rinv11);
622 felec = _mm_mul_ps(velec,rinvsq11);
624 /* Update potential sum for this i atom from the interaction with this j atom. */
625 velec = _mm_andnot_ps(dummy_mask,velec);
626 velecsum = _mm_add_ps(velecsum,velec);
630 fscal = _mm_andnot_ps(dummy_mask,fscal);
632 /* Calculate temporary vectorial force */
633 tx = _mm_mul_ps(fscal,dx11);
634 ty = _mm_mul_ps(fscal,dy11);
635 tz = _mm_mul_ps(fscal,dz11);
637 /* Update vectorial force */
638 fix1 = _mm_add_ps(fix1,tx);
639 fiy1 = _mm_add_ps(fiy1,ty);
640 fiz1 = _mm_add_ps(fiz1,tz);
642 fjx1 = _mm_add_ps(fjx1,tx);
643 fjy1 = _mm_add_ps(fjy1,ty);
644 fjz1 = _mm_add_ps(fjz1,tz);
646 /**************************
647 * CALCULATE INTERACTIONS *
648 **************************/
650 /* COULOMB ELECTROSTATICS */
651 velec = _mm_mul_ps(qq12,rinv12);
652 felec = _mm_mul_ps(velec,rinvsq12);
654 /* Update potential sum for this i atom from the interaction with this j atom. */
655 velec = _mm_andnot_ps(dummy_mask,velec);
656 velecsum = _mm_add_ps(velecsum,velec);
660 fscal = _mm_andnot_ps(dummy_mask,fscal);
662 /* Calculate temporary vectorial force */
663 tx = _mm_mul_ps(fscal,dx12);
664 ty = _mm_mul_ps(fscal,dy12);
665 tz = _mm_mul_ps(fscal,dz12);
667 /* Update vectorial force */
668 fix1 = _mm_add_ps(fix1,tx);
669 fiy1 = _mm_add_ps(fiy1,ty);
670 fiz1 = _mm_add_ps(fiz1,tz);
672 fjx2 = _mm_add_ps(fjx2,tx);
673 fjy2 = _mm_add_ps(fjy2,ty);
674 fjz2 = _mm_add_ps(fjz2,tz);
676 /**************************
677 * CALCULATE INTERACTIONS *
678 **************************/
680 /* COULOMB ELECTROSTATICS */
681 velec = _mm_mul_ps(qq13,rinv13);
682 felec = _mm_mul_ps(velec,rinvsq13);
684 /* Update potential sum for this i atom from the interaction with this j atom. */
685 velec = _mm_andnot_ps(dummy_mask,velec);
686 velecsum = _mm_add_ps(velecsum,velec);
690 fscal = _mm_andnot_ps(dummy_mask,fscal);
692 /* Calculate temporary vectorial force */
693 tx = _mm_mul_ps(fscal,dx13);
694 ty = _mm_mul_ps(fscal,dy13);
695 tz = _mm_mul_ps(fscal,dz13);
697 /* Update vectorial force */
698 fix1 = _mm_add_ps(fix1,tx);
699 fiy1 = _mm_add_ps(fiy1,ty);
700 fiz1 = _mm_add_ps(fiz1,tz);
702 fjx3 = _mm_add_ps(fjx3,tx);
703 fjy3 = _mm_add_ps(fjy3,ty);
704 fjz3 = _mm_add_ps(fjz3,tz);
706 /**************************
707 * CALCULATE INTERACTIONS *
708 **************************/
710 /* COULOMB ELECTROSTATICS */
711 velec = _mm_mul_ps(qq21,rinv21);
712 felec = _mm_mul_ps(velec,rinvsq21);
714 /* Update potential sum for this i atom from the interaction with this j atom. */
715 velec = _mm_andnot_ps(dummy_mask,velec);
716 velecsum = _mm_add_ps(velecsum,velec);
720 fscal = _mm_andnot_ps(dummy_mask,fscal);
722 /* Calculate temporary vectorial force */
723 tx = _mm_mul_ps(fscal,dx21);
724 ty = _mm_mul_ps(fscal,dy21);
725 tz = _mm_mul_ps(fscal,dz21);
727 /* Update vectorial force */
728 fix2 = _mm_add_ps(fix2,tx);
729 fiy2 = _mm_add_ps(fiy2,ty);
730 fiz2 = _mm_add_ps(fiz2,tz);
732 fjx1 = _mm_add_ps(fjx1,tx);
733 fjy1 = _mm_add_ps(fjy1,ty);
734 fjz1 = _mm_add_ps(fjz1,tz);
736 /**************************
737 * CALCULATE INTERACTIONS *
738 **************************/
740 /* COULOMB ELECTROSTATICS */
741 velec = _mm_mul_ps(qq22,rinv22);
742 felec = _mm_mul_ps(velec,rinvsq22);
744 /* Update potential sum for this i atom from the interaction with this j atom. */
745 velec = _mm_andnot_ps(dummy_mask,velec);
746 velecsum = _mm_add_ps(velecsum,velec);
750 fscal = _mm_andnot_ps(dummy_mask,fscal);
752 /* Calculate temporary vectorial force */
753 tx = _mm_mul_ps(fscal,dx22);
754 ty = _mm_mul_ps(fscal,dy22);
755 tz = _mm_mul_ps(fscal,dz22);
757 /* Update vectorial force */
758 fix2 = _mm_add_ps(fix2,tx);
759 fiy2 = _mm_add_ps(fiy2,ty);
760 fiz2 = _mm_add_ps(fiz2,tz);
762 fjx2 = _mm_add_ps(fjx2,tx);
763 fjy2 = _mm_add_ps(fjy2,ty);
764 fjz2 = _mm_add_ps(fjz2,tz);
766 /**************************
767 * CALCULATE INTERACTIONS *
768 **************************/
770 /* COULOMB ELECTROSTATICS */
771 velec = _mm_mul_ps(qq23,rinv23);
772 felec = _mm_mul_ps(velec,rinvsq23);
774 /* Update potential sum for this i atom from the interaction with this j atom. */
775 velec = _mm_andnot_ps(dummy_mask,velec);
776 velecsum = _mm_add_ps(velecsum,velec);
780 fscal = _mm_andnot_ps(dummy_mask,fscal);
782 /* Calculate temporary vectorial force */
783 tx = _mm_mul_ps(fscal,dx23);
784 ty = _mm_mul_ps(fscal,dy23);
785 tz = _mm_mul_ps(fscal,dz23);
787 /* Update vectorial force */
788 fix2 = _mm_add_ps(fix2,tx);
789 fiy2 = _mm_add_ps(fiy2,ty);
790 fiz2 = _mm_add_ps(fiz2,tz);
792 fjx3 = _mm_add_ps(fjx3,tx);
793 fjy3 = _mm_add_ps(fjy3,ty);
794 fjz3 = _mm_add_ps(fjz3,tz);
796 /**************************
797 * CALCULATE INTERACTIONS *
798 **************************/
800 /* COULOMB ELECTROSTATICS */
801 velec = _mm_mul_ps(qq31,rinv31);
802 felec = _mm_mul_ps(velec,rinvsq31);
804 /* Update potential sum for this i atom from the interaction with this j atom. */
805 velec = _mm_andnot_ps(dummy_mask,velec);
806 velecsum = _mm_add_ps(velecsum,velec);
810 fscal = _mm_andnot_ps(dummy_mask,fscal);
812 /* Calculate temporary vectorial force */
813 tx = _mm_mul_ps(fscal,dx31);
814 ty = _mm_mul_ps(fscal,dy31);
815 tz = _mm_mul_ps(fscal,dz31);
817 /* Update vectorial force */
818 fix3 = _mm_add_ps(fix3,tx);
819 fiy3 = _mm_add_ps(fiy3,ty);
820 fiz3 = _mm_add_ps(fiz3,tz);
822 fjx1 = _mm_add_ps(fjx1,tx);
823 fjy1 = _mm_add_ps(fjy1,ty);
824 fjz1 = _mm_add_ps(fjz1,tz);
826 /**************************
827 * CALCULATE INTERACTIONS *
828 **************************/
830 /* COULOMB ELECTROSTATICS */
831 velec = _mm_mul_ps(qq32,rinv32);
832 felec = _mm_mul_ps(velec,rinvsq32);
834 /* Update potential sum for this i atom from the interaction with this j atom. */
835 velec = _mm_andnot_ps(dummy_mask,velec);
836 velecsum = _mm_add_ps(velecsum,velec);
840 fscal = _mm_andnot_ps(dummy_mask,fscal);
842 /* Calculate temporary vectorial force */
843 tx = _mm_mul_ps(fscal,dx32);
844 ty = _mm_mul_ps(fscal,dy32);
845 tz = _mm_mul_ps(fscal,dz32);
847 /* Update vectorial force */
848 fix3 = _mm_add_ps(fix3,tx);
849 fiy3 = _mm_add_ps(fiy3,ty);
850 fiz3 = _mm_add_ps(fiz3,tz);
852 fjx2 = _mm_add_ps(fjx2,tx);
853 fjy2 = _mm_add_ps(fjy2,ty);
854 fjz2 = _mm_add_ps(fjz2,tz);
856 /**************************
857 * CALCULATE INTERACTIONS *
858 **************************/
860 /* COULOMB ELECTROSTATICS */
861 velec = _mm_mul_ps(qq33,rinv33);
862 felec = _mm_mul_ps(velec,rinvsq33);
864 /* Update potential sum for this i atom from the interaction with this j atom. */
865 velec = _mm_andnot_ps(dummy_mask,velec);
866 velecsum = _mm_add_ps(velecsum,velec);
870 fscal = _mm_andnot_ps(dummy_mask,fscal);
872 /* Calculate temporary vectorial force */
873 tx = _mm_mul_ps(fscal,dx33);
874 ty = _mm_mul_ps(fscal,dy33);
875 tz = _mm_mul_ps(fscal,dz33);
877 /* Update vectorial force */
878 fix3 = _mm_add_ps(fix3,tx);
879 fiy3 = _mm_add_ps(fiy3,ty);
880 fiz3 = _mm_add_ps(fiz3,tz);
882 fjx3 = _mm_add_ps(fjx3,tx);
883 fjy3 = _mm_add_ps(fjy3,ty);
884 fjz3 = _mm_add_ps(fjz3,tz);
886 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA+DIM,f+j_coord_offsetB+DIM,
887 f+j_coord_offsetC+DIM,f+j_coord_offsetD+DIM,
888 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
890 /* Inner loop uses 252 flops */
893 /* End of innermost loop */
895 gmx_mm_update_iforce_3atom_swizzle_ps(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
896 f+i_coord_offset+DIM,fshift+i_shift_offset);
899 /* Update potential energies */
900 gmx_mm_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
902 /* Increment number of inner iterations */
903 inneriter += j_index_end - j_index_start;
905 /* Outer loop uses 28 flops */
908 /* Increment number of outer iterations */
911 /* Update outer/inner flops */
913 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_VF,outeriter*28 + inneriter*252);
916 * Gromacs nonbonded kernel: nb_kernel_ElecCoul_VdwNone_GeomW4W4_F_sse2_single
917 * Electrostatics interaction: Coulomb
918 * VdW interaction: None
919 * Geometry: Water4-Water4
920 * Calculate force/pot: Force
923 nb_kernel_ElecCoul_VdwNone_GeomW4W4_F_sse2_single
924 (t_nblist * gmx_restrict nlist,
925 rvec * gmx_restrict xx,
926 rvec * gmx_restrict ff,
927 t_forcerec * gmx_restrict fr,
928 t_mdatoms * gmx_restrict mdatoms,
929 nb_kernel_data_t * gmx_restrict kernel_data,
930 t_nrnb * gmx_restrict nrnb)
932 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
933 * just 0 for non-waters.
934 * Suffixes A,B,C,D refer to j loop unrolling done with SSE, e.g. for the four different
935 * jnr indices corresponding to data put in the four positions in the SIMD register.
937 int i_shift_offset,i_coord_offset,outeriter,inneriter;
938 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
939 int jnrA,jnrB,jnrC,jnrD;
940 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
941 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
942 real shX,shY,shZ,rcutoff_scalar;
943 real *shiftvec,*fshift,*x,*f;
944 __m128 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
946 __m128 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
948 __m128 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
950 __m128 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
951 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D;
952 __m128 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
953 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D;
954 __m128 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
955 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D;
956 __m128 jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
957 __m128 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
958 __m128 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
959 __m128 dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
960 __m128 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
961 __m128 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
962 __m128 dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
963 __m128 dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
964 __m128 dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
965 __m128 dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
966 __m128 velec,felec,velecsum,facel,crf,krf,krf2;
968 __m128 dummy_mask,cutoff_mask;
969 __m128 signbit = _mm_castsi128_ps( _mm_set1_epi32(0x80000000) );
970 __m128 one = _mm_set1_ps(1.0);
971 __m128 two = _mm_set1_ps(2.0);
977 jindex = nlist->jindex;
979 shiftidx = nlist->shift;
981 shiftvec = fr->shift_vec[0];
982 fshift = fr->fshift[0];
983 facel = _mm_set1_ps(fr->epsfac);
984 charge = mdatoms->chargeA;
986 /* Setup water-specific parameters */
987 inr = nlist->iinr[0];
988 iq1 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+1]));
989 iq2 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+2]));
990 iq3 = _mm_mul_ps(facel,_mm_set1_ps(charge[inr+3]));
992 jq1 = _mm_set1_ps(charge[inr+1]);
993 jq2 = _mm_set1_ps(charge[inr+2]);
994 jq3 = _mm_set1_ps(charge[inr+3]);
995 qq11 = _mm_mul_ps(iq1,jq1);
996 qq12 = _mm_mul_ps(iq1,jq2);
997 qq13 = _mm_mul_ps(iq1,jq3);
998 qq21 = _mm_mul_ps(iq2,jq1);
999 qq22 = _mm_mul_ps(iq2,jq2);
1000 qq23 = _mm_mul_ps(iq2,jq3);
1001 qq31 = _mm_mul_ps(iq3,jq1);
1002 qq32 = _mm_mul_ps(iq3,jq2);
1003 qq33 = _mm_mul_ps(iq3,jq3);
1005 /* Avoid stupid compiler warnings */
1006 jnrA = jnrB = jnrC = jnrD = 0;
1007 j_coord_offsetA = 0;
1008 j_coord_offsetB = 0;
1009 j_coord_offsetC = 0;
1010 j_coord_offsetD = 0;
1015 /* Start outer loop over neighborlists */
1016 for(iidx=0; iidx<nri; iidx++)
1018 /* Load shift vector for this list */
1019 i_shift_offset = DIM*shiftidx[iidx];
1020 shX = shiftvec[i_shift_offset+XX];
1021 shY = shiftvec[i_shift_offset+YY];
1022 shZ = shiftvec[i_shift_offset+ZZ];
1024 /* Load limits for loop over neighbors */
1025 j_index_start = jindex[iidx];
1026 j_index_end = jindex[iidx+1];
1028 /* Get outer coordinate index */
1030 i_coord_offset = DIM*inr;
1032 /* Load i particle coords and add shift vector */
1033 ix1 = _mm_set1_ps(shX + x[i_coord_offset+DIM*1+XX]);
1034 iy1 = _mm_set1_ps(shY + x[i_coord_offset+DIM*1+YY]);
1035 iz1 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*1+ZZ]);
1036 ix2 = _mm_set1_ps(shX + x[i_coord_offset+DIM*2+XX]);
1037 iy2 = _mm_set1_ps(shY + x[i_coord_offset+DIM*2+YY]);
1038 iz2 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*2+ZZ]);
1039 ix3 = _mm_set1_ps(shX + x[i_coord_offset+DIM*3+XX]);
1040 iy3 = _mm_set1_ps(shY + x[i_coord_offset+DIM*3+YY]);
1041 iz3 = _mm_set1_ps(shZ + x[i_coord_offset+DIM*3+ZZ]);
1043 fix1 = _mm_setzero_ps();
1044 fiy1 = _mm_setzero_ps();
1045 fiz1 = _mm_setzero_ps();
1046 fix2 = _mm_setzero_ps();
1047 fiy2 = _mm_setzero_ps();
1048 fiz2 = _mm_setzero_ps();
1049 fix3 = _mm_setzero_ps();
1050 fiy3 = _mm_setzero_ps();
1051 fiz3 = _mm_setzero_ps();
1053 /* Start inner kernel loop */
1054 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+3]>=0; jidx+=4)
1057 /* Get j neighbor index, and coordinate index */
1059 jnrB = jjnr[jidx+1];
1060 jnrC = jjnr[jidx+2];
1061 jnrD = jjnr[jidx+3];
1063 j_coord_offsetA = DIM*jnrA;
1064 j_coord_offsetB = DIM*jnrB;
1065 j_coord_offsetC = DIM*jnrC;
1066 j_coord_offsetD = DIM*jnrD;
1068 /* load j atom coordinates */
1069 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
1070 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
1071 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1073 /* Calculate displacement vector */
1074 dx11 = _mm_sub_ps(ix1,jx1);
1075 dy11 = _mm_sub_ps(iy1,jy1);
1076 dz11 = _mm_sub_ps(iz1,jz1);
1077 dx12 = _mm_sub_ps(ix1,jx2);
1078 dy12 = _mm_sub_ps(iy1,jy2);
1079 dz12 = _mm_sub_ps(iz1,jz2);
1080 dx13 = _mm_sub_ps(ix1,jx3);
1081 dy13 = _mm_sub_ps(iy1,jy3);
1082 dz13 = _mm_sub_ps(iz1,jz3);
1083 dx21 = _mm_sub_ps(ix2,jx1);
1084 dy21 = _mm_sub_ps(iy2,jy1);
1085 dz21 = _mm_sub_ps(iz2,jz1);
1086 dx22 = _mm_sub_ps(ix2,jx2);
1087 dy22 = _mm_sub_ps(iy2,jy2);
1088 dz22 = _mm_sub_ps(iz2,jz2);
1089 dx23 = _mm_sub_ps(ix2,jx3);
1090 dy23 = _mm_sub_ps(iy2,jy3);
1091 dz23 = _mm_sub_ps(iz2,jz3);
1092 dx31 = _mm_sub_ps(ix3,jx1);
1093 dy31 = _mm_sub_ps(iy3,jy1);
1094 dz31 = _mm_sub_ps(iz3,jz1);
1095 dx32 = _mm_sub_ps(ix3,jx2);
1096 dy32 = _mm_sub_ps(iy3,jy2);
1097 dz32 = _mm_sub_ps(iz3,jz2);
1098 dx33 = _mm_sub_ps(ix3,jx3);
1099 dy33 = _mm_sub_ps(iy3,jy3);
1100 dz33 = _mm_sub_ps(iz3,jz3);
1102 /* Calculate squared distance and things based on it */
1103 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1104 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1105 rsq13 = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
1106 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1107 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1108 rsq23 = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
1109 rsq31 = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
1110 rsq32 = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
1111 rsq33 = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
1113 rinv11 = gmx_mm_invsqrt_ps(rsq11);
1114 rinv12 = gmx_mm_invsqrt_ps(rsq12);
1115 rinv13 = gmx_mm_invsqrt_ps(rsq13);
1116 rinv21 = gmx_mm_invsqrt_ps(rsq21);
1117 rinv22 = gmx_mm_invsqrt_ps(rsq22);
1118 rinv23 = gmx_mm_invsqrt_ps(rsq23);
1119 rinv31 = gmx_mm_invsqrt_ps(rsq31);
1120 rinv32 = gmx_mm_invsqrt_ps(rsq32);
1121 rinv33 = gmx_mm_invsqrt_ps(rsq33);
1123 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1124 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1125 rinvsq13 = _mm_mul_ps(rinv13,rinv13);
1126 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
1127 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
1128 rinvsq23 = _mm_mul_ps(rinv23,rinv23);
1129 rinvsq31 = _mm_mul_ps(rinv31,rinv31);
1130 rinvsq32 = _mm_mul_ps(rinv32,rinv32);
1131 rinvsq33 = _mm_mul_ps(rinv33,rinv33);
1133 fjx1 = _mm_setzero_ps();
1134 fjy1 = _mm_setzero_ps();
1135 fjz1 = _mm_setzero_ps();
1136 fjx2 = _mm_setzero_ps();
1137 fjy2 = _mm_setzero_ps();
1138 fjz2 = _mm_setzero_ps();
1139 fjx3 = _mm_setzero_ps();
1140 fjy3 = _mm_setzero_ps();
1141 fjz3 = _mm_setzero_ps();
1143 /**************************
1144 * CALCULATE INTERACTIONS *
1145 **************************/
1147 /* COULOMB ELECTROSTATICS */
1148 velec = _mm_mul_ps(qq11,rinv11);
1149 felec = _mm_mul_ps(velec,rinvsq11);
1153 /* Calculate temporary vectorial force */
1154 tx = _mm_mul_ps(fscal,dx11);
1155 ty = _mm_mul_ps(fscal,dy11);
1156 tz = _mm_mul_ps(fscal,dz11);
1158 /* Update vectorial force */
1159 fix1 = _mm_add_ps(fix1,tx);
1160 fiy1 = _mm_add_ps(fiy1,ty);
1161 fiz1 = _mm_add_ps(fiz1,tz);
1163 fjx1 = _mm_add_ps(fjx1,tx);
1164 fjy1 = _mm_add_ps(fjy1,ty);
1165 fjz1 = _mm_add_ps(fjz1,tz);
1167 /**************************
1168 * CALCULATE INTERACTIONS *
1169 **************************/
1171 /* COULOMB ELECTROSTATICS */
1172 velec = _mm_mul_ps(qq12,rinv12);
1173 felec = _mm_mul_ps(velec,rinvsq12);
1177 /* Calculate temporary vectorial force */
1178 tx = _mm_mul_ps(fscal,dx12);
1179 ty = _mm_mul_ps(fscal,dy12);
1180 tz = _mm_mul_ps(fscal,dz12);
1182 /* Update vectorial force */
1183 fix1 = _mm_add_ps(fix1,tx);
1184 fiy1 = _mm_add_ps(fiy1,ty);
1185 fiz1 = _mm_add_ps(fiz1,tz);
1187 fjx2 = _mm_add_ps(fjx2,tx);
1188 fjy2 = _mm_add_ps(fjy2,ty);
1189 fjz2 = _mm_add_ps(fjz2,tz);
1191 /**************************
1192 * CALCULATE INTERACTIONS *
1193 **************************/
1195 /* COULOMB ELECTROSTATICS */
1196 velec = _mm_mul_ps(qq13,rinv13);
1197 felec = _mm_mul_ps(velec,rinvsq13);
1201 /* Calculate temporary vectorial force */
1202 tx = _mm_mul_ps(fscal,dx13);
1203 ty = _mm_mul_ps(fscal,dy13);
1204 tz = _mm_mul_ps(fscal,dz13);
1206 /* Update vectorial force */
1207 fix1 = _mm_add_ps(fix1,tx);
1208 fiy1 = _mm_add_ps(fiy1,ty);
1209 fiz1 = _mm_add_ps(fiz1,tz);
1211 fjx3 = _mm_add_ps(fjx3,tx);
1212 fjy3 = _mm_add_ps(fjy3,ty);
1213 fjz3 = _mm_add_ps(fjz3,tz);
1215 /**************************
1216 * CALCULATE INTERACTIONS *
1217 **************************/
1219 /* COULOMB ELECTROSTATICS */
1220 velec = _mm_mul_ps(qq21,rinv21);
1221 felec = _mm_mul_ps(velec,rinvsq21);
1225 /* Calculate temporary vectorial force */
1226 tx = _mm_mul_ps(fscal,dx21);
1227 ty = _mm_mul_ps(fscal,dy21);
1228 tz = _mm_mul_ps(fscal,dz21);
1230 /* Update vectorial force */
1231 fix2 = _mm_add_ps(fix2,tx);
1232 fiy2 = _mm_add_ps(fiy2,ty);
1233 fiz2 = _mm_add_ps(fiz2,tz);
1235 fjx1 = _mm_add_ps(fjx1,tx);
1236 fjy1 = _mm_add_ps(fjy1,ty);
1237 fjz1 = _mm_add_ps(fjz1,tz);
1239 /**************************
1240 * CALCULATE INTERACTIONS *
1241 **************************/
1243 /* COULOMB ELECTROSTATICS */
1244 velec = _mm_mul_ps(qq22,rinv22);
1245 felec = _mm_mul_ps(velec,rinvsq22);
1249 /* Calculate temporary vectorial force */
1250 tx = _mm_mul_ps(fscal,dx22);
1251 ty = _mm_mul_ps(fscal,dy22);
1252 tz = _mm_mul_ps(fscal,dz22);
1254 /* Update vectorial force */
1255 fix2 = _mm_add_ps(fix2,tx);
1256 fiy2 = _mm_add_ps(fiy2,ty);
1257 fiz2 = _mm_add_ps(fiz2,tz);
1259 fjx2 = _mm_add_ps(fjx2,tx);
1260 fjy2 = _mm_add_ps(fjy2,ty);
1261 fjz2 = _mm_add_ps(fjz2,tz);
1263 /**************************
1264 * CALCULATE INTERACTIONS *
1265 **************************/
1267 /* COULOMB ELECTROSTATICS */
1268 velec = _mm_mul_ps(qq23,rinv23);
1269 felec = _mm_mul_ps(velec,rinvsq23);
1273 /* Calculate temporary vectorial force */
1274 tx = _mm_mul_ps(fscal,dx23);
1275 ty = _mm_mul_ps(fscal,dy23);
1276 tz = _mm_mul_ps(fscal,dz23);
1278 /* Update vectorial force */
1279 fix2 = _mm_add_ps(fix2,tx);
1280 fiy2 = _mm_add_ps(fiy2,ty);
1281 fiz2 = _mm_add_ps(fiz2,tz);
1283 fjx3 = _mm_add_ps(fjx3,tx);
1284 fjy3 = _mm_add_ps(fjy3,ty);
1285 fjz3 = _mm_add_ps(fjz3,tz);
1287 /**************************
1288 * CALCULATE INTERACTIONS *
1289 **************************/
1291 /* COULOMB ELECTROSTATICS */
1292 velec = _mm_mul_ps(qq31,rinv31);
1293 felec = _mm_mul_ps(velec,rinvsq31);
1297 /* Calculate temporary vectorial force */
1298 tx = _mm_mul_ps(fscal,dx31);
1299 ty = _mm_mul_ps(fscal,dy31);
1300 tz = _mm_mul_ps(fscal,dz31);
1302 /* Update vectorial force */
1303 fix3 = _mm_add_ps(fix3,tx);
1304 fiy3 = _mm_add_ps(fiy3,ty);
1305 fiz3 = _mm_add_ps(fiz3,tz);
1307 fjx1 = _mm_add_ps(fjx1,tx);
1308 fjy1 = _mm_add_ps(fjy1,ty);
1309 fjz1 = _mm_add_ps(fjz1,tz);
1311 /**************************
1312 * CALCULATE INTERACTIONS *
1313 **************************/
1315 /* COULOMB ELECTROSTATICS */
1316 velec = _mm_mul_ps(qq32,rinv32);
1317 felec = _mm_mul_ps(velec,rinvsq32);
1321 /* Calculate temporary vectorial force */
1322 tx = _mm_mul_ps(fscal,dx32);
1323 ty = _mm_mul_ps(fscal,dy32);
1324 tz = _mm_mul_ps(fscal,dz32);
1326 /* Update vectorial force */
1327 fix3 = _mm_add_ps(fix3,tx);
1328 fiy3 = _mm_add_ps(fiy3,ty);
1329 fiz3 = _mm_add_ps(fiz3,tz);
1331 fjx2 = _mm_add_ps(fjx2,tx);
1332 fjy2 = _mm_add_ps(fjy2,ty);
1333 fjz2 = _mm_add_ps(fjz2,tz);
1335 /**************************
1336 * CALCULATE INTERACTIONS *
1337 **************************/
1339 /* COULOMB ELECTROSTATICS */
1340 velec = _mm_mul_ps(qq33,rinv33);
1341 felec = _mm_mul_ps(velec,rinvsq33);
1345 /* Calculate temporary vectorial force */
1346 tx = _mm_mul_ps(fscal,dx33);
1347 ty = _mm_mul_ps(fscal,dy33);
1348 tz = _mm_mul_ps(fscal,dz33);
1350 /* Update vectorial force */
1351 fix3 = _mm_add_ps(fix3,tx);
1352 fiy3 = _mm_add_ps(fiy3,ty);
1353 fiz3 = _mm_add_ps(fiz3,tz);
1355 fjx3 = _mm_add_ps(fjx3,tx);
1356 fjy3 = _mm_add_ps(fjy3,ty);
1357 fjz3 = _mm_add_ps(fjz3,tz);
1359 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA+DIM,f+j_coord_offsetB+DIM,
1360 f+j_coord_offsetC+DIM,f+j_coord_offsetD+DIM,
1361 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1363 /* Inner loop uses 243 flops */
1366 if(jidx<j_index_end)
1369 /* Get j neighbor index, and coordinate index */
1371 jnrB = jjnr[jidx+1];
1372 jnrC = jjnr[jidx+2];
1373 jnrD = jjnr[jidx+3];
1375 /* Sign of each element will be negative for non-real atoms.
1376 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
1377 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
1379 dummy_mask = gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128()));
1380 jnrA = (jnrA>=0) ? jnrA : 0;
1381 jnrB = (jnrB>=0) ? jnrB : 0;
1382 jnrC = (jnrC>=0) ? jnrC : 0;
1383 jnrD = (jnrD>=0) ? jnrD : 0;
1385 j_coord_offsetA = DIM*jnrA;
1386 j_coord_offsetB = DIM*jnrB;
1387 j_coord_offsetC = DIM*jnrC;
1388 j_coord_offsetD = DIM*jnrD;
1390 /* load j atom coordinates */
1391 gmx_mm_load_3rvec_4ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
1392 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
1393 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1395 /* Calculate displacement vector */
1396 dx11 = _mm_sub_ps(ix1,jx1);
1397 dy11 = _mm_sub_ps(iy1,jy1);
1398 dz11 = _mm_sub_ps(iz1,jz1);
1399 dx12 = _mm_sub_ps(ix1,jx2);
1400 dy12 = _mm_sub_ps(iy1,jy2);
1401 dz12 = _mm_sub_ps(iz1,jz2);
1402 dx13 = _mm_sub_ps(ix1,jx3);
1403 dy13 = _mm_sub_ps(iy1,jy3);
1404 dz13 = _mm_sub_ps(iz1,jz3);
1405 dx21 = _mm_sub_ps(ix2,jx1);
1406 dy21 = _mm_sub_ps(iy2,jy1);
1407 dz21 = _mm_sub_ps(iz2,jz1);
1408 dx22 = _mm_sub_ps(ix2,jx2);
1409 dy22 = _mm_sub_ps(iy2,jy2);
1410 dz22 = _mm_sub_ps(iz2,jz2);
1411 dx23 = _mm_sub_ps(ix2,jx3);
1412 dy23 = _mm_sub_ps(iy2,jy3);
1413 dz23 = _mm_sub_ps(iz2,jz3);
1414 dx31 = _mm_sub_ps(ix3,jx1);
1415 dy31 = _mm_sub_ps(iy3,jy1);
1416 dz31 = _mm_sub_ps(iz3,jz1);
1417 dx32 = _mm_sub_ps(ix3,jx2);
1418 dy32 = _mm_sub_ps(iy3,jy2);
1419 dz32 = _mm_sub_ps(iz3,jz2);
1420 dx33 = _mm_sub_ps(ix3,jx3);
1421 dy33 = _mm_sub_ps(iy3,jy3);
1422 dz33 = _mm_sub_ps(iz3,jz3);
1424 /* Calculate squared distance and things based on it */
1425 rsq11 = gmx_mm_calc_rsq_ps(dx11,dy11,dz11);
1426 rsq12 = gmx_mm_calc_rsq_ps(dx12,dy12,dz12);
1427 rsq13 = gmx_mm_calc_rsq_ps(dx13,dy13,dz13);
1428 rsq21 = gmx_mm_calc_rsq_ps(dx21,dy21,dz21);
1429 rsq22 = gmx_mm_calc_rsq_ps(dx22,dy22,dz22);
1430 rsq23 = gmx_mm_calc_rsq_ps(dx23,dy23,dz23);
1431 rsq31 = gmx_mm_calc_rsq_ps(dx31,dy31,dz31);
1432 rsq32 = gmx_mm_calc_rsq_ps(dx32,dy32,dz32);
1433 rsq33 = gmx_mm_calc_rsq_ps(dx33,dy33,dz33);
1435 rinv11 = gmx_mm_invsqrt_ps(rsq11);
1436 rinv12 = gmx_mm_invsqrt_ps(rsq12);
1437 rinv13 = gmx_mm_invsqrt_ps(rsq13);
1438 rinv21 = gmx_mm_invsqrt_ps(rsq21);
1439 rinv22 = gmx_mm_invsqrt_ps(rsq22);
1440 rinv23 = gmx_mm_invsqrt_ps(rsq23);
1441 rinv31 = gmx_mm_invsqrt_ps(rsq31);
1442 rinv32 = gmx_mm_invsqrt_ps(rsq32);
1443 rinv33 = gmx_mm_invsqrt_ps(rsq33);
1445 rinvsq11 = _mm_mul_ps(rinv11,rinv11);
1446 rinvsq12 = _mm_mul_ps(rinv12,rinv12);
1447 rinvsq13 = _mm_mul_ps(rinv13,rinv13);
1448 rinvsq21 = _mm_mul_ps(rinv21,rinv21);
1449 rinvsq22 = _mm_mul_ps(rinv22,rinv22);
1450 rinvsq23 = _mm_mul_ps(rinv23,rinv23);
1451 rinvsq31 = _mm_mul_ps(rinv31,rinv31);
1452 rinvsq32 = _mm_mul_ps(rinv32,rinv32);
1453 rinvsq33 = _mm_mul_ps(rinv33,rinv33);
1455 fjx1 = _mm_setzero_ps();
1456 fjy1 = _mm_setzero_ps();
1457 fjz1 = _mm_setzero_ps();
1458 fjx2 = _mm_setzero_ps();
1459 fjy2 = _mm_setzero_ps();
1460 fjz2 = _mm_setzero_ps();
1461 fjx3 = _mm_setzero_ps();
1462 fjy3 = _mm_setzero_ps();
1463 fjz3 = _mm_setzero_ps();
1465 /**************************
1466 * CALCULATE INTERACTIONS *
1467 **************************/
1469 /* COULOMB ELECTROSTATICS */
1470 velec = _mm_mul_ps(qq11,rinv11);
1471 felec = _mm_mul_ps(velec,rinvsq11);
1475 fscal = _mm_andnot_ps(dummy_mask,fscal);
1477 /* Calculate temporary vectorial force */
1478 tx = _mm_mul_ps(fscal,dx11);
1479 ty = _mm_mul_ps(fscal,dy11);
1480 tz = _mm_mul_ps(fscal,dz11);
1482 /* Update vectorial force */
1483 fix1 = _mm_add_ps(fix1,tx);
1484 fiy1 = _mm_add_ps(fiy1,ty);
1485 fiz1 = _mm_add_ps(fiz1,tz);
1487 fjx1 = _mm_add_ps(fjx1,tx);
1488 fjy1 = _mm_add_ps(fjy1,ty);
1489 fjz1 = _mm_add_ps(fjz1,tz);
1491 /**************************
1492 * CALCULATE INTERACTIONS *
1493 **************************/
1495 /* COULOMB ELECTROSTATICS */
1496 velec = _mm_mul_ps(qq12,rinv12);
1497 felec = _mm_mul_ps(velec,rinvsq12);
1501 fscal = _mm_andnot_ps(dummy_mask,fscal);
1503 /* Calculate temporary vectorial force */
1504 tx = _mm_mul_ps(fscal,dx12);
1505 ty = _mm_mul_ps(fscal,dy12);
1506 tz = _mm_mul_ps(fscal,dz12);
1508 /* Update vectorial force */
1509 fix1 = _mm_add_ps(fix1,tx);
1510 fiy1 = _mm_add_ps(fiy1,ty);
1511 fiz1 = _mm_add_ps(fiz1,tz);
1513 fjx2 = _mm_add_ps(fjx2,tx);
1514 fjy2 = _mm_add_ps(fjy2,ty);
1515 fjz2 = _mm_add_ps(fjz2,tz);
1517 /**************************
1518 * CALCULATE INTERACTIONS *
1519 **************************/
1521 /* COULOMB ELECTROSTATICS */
1522 velec = _mm_mul_ps(qq13,rinv13);
1523 felec = _mm_mul_ps(velec,rinvsq13);
1527 fscal = _mm_andnot_ps(dummy_mask,fscal);
1529 /* Calculate temporary vectorial force */
1530 tx = _mm_mul_ps(fscal,dx13);
1531 ty = _mm_mul_ps(fscal,dy13);
1532 tz = _mm_mul_ps(fscal,dz13);
1534 /* Update vectorial force */
1535 fix1 = _mm_add_ps(fix1,tx);
1536 fiy1 = _mm_add_ps(fiy1,ty);
1537 fiz1 = _mm_add_ps(fiz1,tz);
1539 fjx3 = _mm_add_ps(fjx3,tx);
1540 fjy3 = _mm_add_ps(fjy3,ty);
1541 fjz3 = _mm_add_ps(fjz3,tz);
1543 /**************************
1544 * CALCULATE INTERACTIONS *
1545 **************************/
1547 /* COULOMB ELECTROSTATICS */
1548 velec = _mm_mul_ps(qq21,rinv21);
1549 felec = _mm_mul_ps(velec,rinvsq21);
1553 fscal = _mm_andnot_ps(dummy_mask,fscal);
1555 /* Calculate temporary vectorial force */
1556 tx = _mm_mul_ps(fscal,dx21);
1557 ty = _mm_mul_ps(fscal,dy21);
1558 tz = _mm_mul_ps(fscal,dz21);
1560 /* Update vectorial force */
1561 fix2 = _mm_add_ps(fix2,tx);
1562 fiy2 = _mm_add_ps(fiy2,ty);
1563 fiz2 = _mm_add_ps(fiz2,tz);
1565 fjx1 = _mm_add_ps(fjx1,tx);
1566 fjy1 = _mm_add_ps(fjy1,ty);
1567 fjz1 = _mm_add_ps(fjz1,tz);
1569 /**************************
1570 * CALCULATE INTERACTIONS *
1571 **************************/
1573 /* COULOMB ELECTROSTATICS */
1574 velec = _mm_mul_ps(qq22,rinv22);
1575 felec = _mm_mul_ps(velec,rinvsq22);
1579 fscal = _mm_andnot_ps(dummy_mask,fscal);
1581 /* Calculate temporary vectorial force */
1582 tx = _mm_mul_ps(fscal,dx22);
1583 ty = _mm_mul_ps(fscal,dy22);
1584 tz = _mm_mul_ps(fscal,dz22);
1586 /* Update vectorial force */
1587 fix2 = _mm_add_ps(fix2,tx);
1588 fiy2 = _mm_add_ps(fiy2,ty);
1589 fiz2 = _mm_add_ps(fiz2,tz);
1591 fjx2 = _mm_add_ps(fjx2,tx);
1592 fjy2 = _mm_add_ps(fjy2,ty);
1593 fjz2 = _mm_add_ps(fjz2,tz);
1595 /**************************
1596 * CALCULATE INTERACTIONS *
1597 **************************/
1599 /* COULOMB ELECTROSTATICS */
1600 velec = _mm_mul_ps(qq23,rinv23);
1601 felec = _mm_mul_ps(velec,rinvsq23);
1605 fscal = _mm_andnot_ps(dummy_mask,fscal);
1607 /* Calculate temporary vectorial force */
1608 tx = _mm_mul_ps(fscal,dx23);
1609 ty = _mm_mul_ps(fscal,dy23);
1610 tz = _mm_mul_ps(fscal,dz23);
1612 /* Update vectorial force */
1613 fix2 = _mm_add_ps(fix2,tx);
1614 fiy2 = _mm_add_ps(fiy2,ty);
1615 fiz2 = _mm_add_ps(fiz2,tz);
1617 fjx3 = _mm_add_ps(fjx3,tx);
1618 fjy3 = _mm_add_ps(fjy3,ty);
1619 fjz3 = _mm_add_ps(fjz3,tz);
1621 /**************************
1622 * CALCULATE INTERACTIONS *
1623 **************************/
1625 /* COULOMB ELECTROSTATICS */
1626 velec = _mm_mul_ps(qq31,rinv31);
1627 felec = _mm_mul_ps(velec,rinvsq31);
1631 fscal = _mm_andnot_ps(dummy_mask,fscal);
1633 /* Calculate temporary vectorial force */
1634 tx = _mm_mul_ps(fscal,dx31);
1635 ty = _mm_mul_ps(fscal,dy31);
1636 tz = _mm_mul_ps(fscal,dz31);
1638 /* Update vectorial force */
1639 fix3 = _mm_add_ps(fix3,tx);
1640 fiy3 = _mm_add_ps(fiy3,ty);
1641 fiz3 = _mm_add_ps(fiz3,tz);
1643 fjx1 = _mm_add_ps(fjx1,tx);
1644 fjy1 = _mm_add_ps(fjy1,ty);
1645 fjz1 = _mm_add_ps(fjz1,tz);
1647 /**************************
1648 * CALCULATE INTERACTIONS *
1649 **************************/
1651 /* COULOMB ELECTROSTATICS */
1652 velec = _mm_mul_ps(qq32,rinv32);
1653 felec = _mm_mul_ps(velec,rinvsq32);
1657 fscal = _mm_andnot_ps(dummy_mask,fscal);
1659 /* Calculate temporary vectorial force */
1660 tx = _mm_mul_ps(fscal,dx32);
1661 ty = _mm_mul_ps(fscal,dy32);
1662 tz = _mm_mul_ps(fscal,dz32);
1664 /* Update vectorial force */
1665 fix3 = _mm_add_ps(fix3,tx);
1666 fiy3 = _mm_add_ps(fiy3,ty);
1667 fiz3 = _mm_add_ps(fiz3,tz);
1669 fjx2 = _mm_add_ps(fjx2,tx);
1670 fjy2 = _mm_add_ps(fjy2,ty);
1671 fjz2 = _mm_add_ps(fjz2,tz);
1673 /**************************
1674 * CALCULATE INTERACTIONS *
1675 **************************/
1677 /* COULOMB ELECTROSTATICS */
1678 velec = _mm_mul_ps(qq33,rinv33);
1679 felec = _mm_mul_ps(velec,rinvsq33);
1683 fscal = _mm_andnot_ps(dummy_mask,fscal);
1685 /* Calculate temporary vectorial force */
1686 tx = _mm_mul_ps(fscal,dx33);
1687 ty = _mm_mul_ps(fscal,dy33);
1688 tz = _mm_mul_ps(fscal,dz33);
1690 /* Update vectorial force */
1691 fix3 = _mm_add_ps(fix3,tx);
1692 fiy3 = _mm_add_ps(fiy3,ty);
1693 fiz3 = _mm_add_ps(fiz3,tz);
1695 fjx3 = _mm_add_ps(fjx3,tx);
1696 fjy3 = _mm_add_ps(fjy3,ty);
1697 fjz3 = _mm_add_ps(fjz3,tz);
1699 gmx_mm_decrement_3rvec_4ptr_swizzle_ps(f+j_coord_offsetA+DIM,f+j_coord_offsetB+DIM,
1700 f+j_coord_offsetC+DIM,f+j_coord_offsetD+DIM,
1701 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1703 /* Inner loop uses 243 flops */
1706 /* End of innermost loop */
1708 gmx_mm_update_iforce_3atom_swizzle_ps(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1709 f+i_coord_offset+DIM,fshift+i_shift_offset);
1711 /* Increment number of inner iterations */
1712 inneriter += j_index_end - j_index_start;
1714 /* Outer loop uses 27 flops */
1717 /* Increment number of outer iterations */
1720 /* Update outer/inner flops */
1722 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_F,outeriter*27 + inneriter*243);