2 * Note: this file was generated by the Gromacs avx_256_single kernel generator.
4 * This source code is part of
8 * Copyright (c) 2001-2012, The GROMACS Development Team
10 * Gromacs is a library for molecular simulation and trajectory analysis,
11 * written by Erik Lindahl, David van der Spoel, Berk Hess, and others - for
12 * a full list of developers and information, check out http://www.gromacs.org
14 * This program is free software; you can redistribute it and/or modify it under
15 * the terms of the GNU Lesser General Public License as published by the Free
16 * Software Foundation; either version 2 of the License, or (at your option) any
19 * To help fund GROMACS development, we humbly ask that you cite
20 * the papers people have written on it - you can find them on the website.
28 #include "../nb_kernel.h"
29 #include "types/simple.h"
33 #include "gmx_math_x86_avx_256_single.h"
34 #include "kernelutil_x86_avx_256_single.h"
37 * Gromacs nonbonded kernel: nb_kernel_ElecCSTab_VdwNone_GeomW4W4_VF_avx_256_single
38 * Electrostatics interaction: CubicSplineTable
39 * VdW interaction: None
40 * Geometry: Water4-Water4
41 * Calculate force/pot: PotentialAndForce
44 nb_kernel_ElecCSTab_VdwNone_GeomW4W4_VF_avx_256_single
45 (t_nblist * gmx_restrict nlist,
46 rvec * gmx_restrict xx,
47 rvec * gmx_restrict ff,
48 t_forcerec * gmx_restrict fr,
49 t_mdatoms * gmx_restrict mdatoms,
50 nb_kernel_data_t * gmx_restrict kernel_data,
51 t_nrnb * gmx_restrict nrnb)
53 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
54 * just 0 for non-waters.
55 * Suffixes A,B,C,D,E,F,G,H refer to j loop unrolling done with AVX, e.g. for the eight different
56 * jnr indices corresponding to data put in the four positions in the SIMD register.
58 int i_shift_offset,i_coord_offset,outeriter,inneriter;
59 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
60 int jnrA,jnrB,jnrC,jnrD;
61 int jnrE,jnrF,jnrG,jnrH;
62 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
63 int jnrlistE,jnrlistF,jnrlistG,jnrlistH;
64 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
65 int j_coord_offsetE,j_coord_offsetF,j_coord_offsetG,j_coord_offsetH;
66 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
68 real *shiftvec,*fshift,*x,*f;
69 real *fjptrA,*fjptrB,*fjptrC,*fjptrD,*fjptrE,*fjptrF,*fjptrG,*fjptrH;
71 __m256 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
72 real * vdwioffsetptr1;
73 __m256 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
74 real * vdwioffsetptr2;
75 __m256 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
76 real * vdwioffsetptr3;
77 __m256 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
78 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D,vdwjidx1E,vdwjidx1F,vdwjidx1G,vdwjidx1H;
79 __m256 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
80 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D,vdwjidx2E,vdwjidx2F,vdwjidx2G,vdwjidx2H;
81 __m256 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
82 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D,vdwjidx3E,vdwjidx3F,vdwjidx3G,vdwjidx3H;
83 __m256 jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
84 __m256 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
85 __m256 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
86 __m256 dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
87 __m256 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
88 __m256 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
89 __m256 dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
90 __m256 dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
91 __m256 dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
92 __m256 dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
93 __m256 velec,felec,velecsum,facel,crf,krf,krf2;
96 __m128i vfitab_lo,vfitab_hi;
97 __m128i ifour = _mm_set1_epi32(4);
98 __m256 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
100 __m256 dummy_mask,cutoff_mask;
101 __m256 signbit = _mm256_castsi256_ps( _mm256_set1_epi32(0x80000000) );
102 __m256 one = _mm256_set1_ps(1.0);
103 __m256 two = _mm256_set1_ps(2.0);
109 jindex = nlist->jindex;
111 shiftidx = nlist->shift;
113 shiftvec = fr->shift_vec[0];
114 fshift = fr->fshift[0];
115 facel = _mm256_set1_ps(fr->epsfac);
116 charge = mdatoms->chargeA;
118 vftab = kernel_data->table_elec->data;
119 vftabscale = _mm256_set1_ps(kernel_data->table_elec->scale);
121 /* Setup water-specific parameters */
122 inr = nlist->iinr[0];
123 iq1 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+1]));
124 iq2 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+2]));
125 iq3 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+3]));
127 jq1 = _mm256_set1_ps(charge[inr+1]);
128 jq2 = _mm256_set1_ps(charge[inr+2]);
129 jq3 = _mm256_set1_ps(charge[inr+3]);
130 qq11 = _mm256_mul_ps(iq1,jq1);
131 qq12 = _mm256_mul_ps(iq1,jq2);
132 qq13 = _mm256_mul_ps(iq1,jq3);
133 qq21 = _mm256_mul_ps(iq2,jq1);
134 qq22 = _mm256_mul_ps(iq2,jq2);
135 qq23 = _mm256_mul_ps(iq2,jq3);
136 qq31 = _mm256_mul_ps(iq3,jq1);
137 qq32 = _mm256_mul_ps(iq3,jq2);
138 qq33 = _mm256_mul_ps(iq3,jq3);
140 /* Avoid stupid compiler warnings */
141 jnrA = jnrB = jnrC = jnrD = jnrE = jnrF = jnrG = jnrH = 0;
154 for(iidx=0;iidx<4*DIM;iidx++)
159 /* Start outer loop over neighborlists */
160 for(iidx=0; iidx<nri; iidx++)
162 /* Load shift vector for this list */
163 i_shift_offset = DIM*shiftidx[iidx];
165 /* Load limits for loop over neighbors */
166 j_index_start = jindex[iidx];
167 j_index_end = jindex[iidx+1];
169 /* Get outer coordinate index */
171 i_coord_offset = DIM*inr;
173 /* Load i particle coords and add shift vector */
174 gmx_mm256_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset+DIM,
175 &ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
177 fix1 = _mm256_setzero_ps();
178 fiy1 = _mm256_setzero_ps();
179 fiz1 = _mm256_setzero_ps();
180 fix2 = _mm256_setzero_ps();
181 fiy2 = _mm256_setzero_ps();
182 fiz2 = _mm256_setzero_ps();
183 fix3 = _mm256_setzero_ps();
184 fiy3 = _mm256_setzero_ps();
185 fiz3 = _mm256_setzero_ps();
187 /* Reset potential sums */
188 velecsum = _mm256_setzero_ps();
190 /* Start inner kernel loop */
191 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+7]>=0; jidx+=8)
194 /* Get j neighbor index, and coordinate index */
203 j_coord_offsetA = DIM*jnrA;
204 j_coord_offsetB = DIM*jnrB;
205 j_coord_offsetC = DIM*jnrC;
206 j_coord_offsetD = DIM*jnrD;
207 j_coord_offsetE = DIM*jnrE;
208 j_coord_offsetF = DIM*jnrF;
209 j_coord_offsetG = DIM*jnrG;
210 j_coord_offsetH = DIM*jnrH;
212 /* load j atom coordinates */
213 gmx_mm256_load_3rvec_8ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
214 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
215 x+j_coord_offsetE+DIM,x+j_coord_offsetF+DIM,
216 x+j_coord_offsetG+DIM,x+j_coord_offsetH+DIM,
217 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
219 /* Calculate displacement vector */
220 dx11 = _mm256_sub_ps(ix1,jx1);
221 dy11 = _mm256_sub_ps(iy1,jy1);
222 dz11 = _mm256_sub_ps(iz1,jz1);
223 dx12 = _mm256_sub_ps(ix1,jx2);
224 dy12 = _mm256_sub_ps(iy1,jy2);
225 dz12 = _mm256_sub_ps(iz1,jz2);
226 dx13 = _mm256_sub_ps(ix1,jx3);
227 dy13 = _mm256_sub_ps(iy1,jy3);
228 dz13 = _mm256_sub_ps(iz1,jz3);
229 dx21 = _mm256_sub_ps(ix2,jx1);
230 dy21 = _mm256_sub_ps(iy2,jy1);
231 dz21 = _mm256_sub_ps(iz2,jz1);
232 dx22 = _mm256_sub_ps(ix2,jx2);
233 dy22 = _mm256_sub_ps(iy2,jy2);
234 dz22 = _mm256_sub_ps(iz2,jz2);
235 dx23 = _mm256_sub_ps(ix2,jx3);
236 dy23 = _mm256_sub_ps(iy2,jy3);
237 dz23 = _mm256_sub_ps(iz2,jz3);
238 dx31 = _mm256_sub_ps(ix3,jx1);
239 dy31 = _mm256_sub_ps(iy3,jy1);
240 dz31 = _mm256_sub_ps(iz3,jz1);
241 dx32 = _mm256_sub_ps(ix3,jx2);
242 dy32 = _mm256_sub_ps(iy3,jy2);
243 dz32 = _mm256_sub_ps(iz3,jz2);
244 dx33 = _mm256_sub_ps(ix3,jx3);
245 dy33 = _mm256_sub_ps(iy3,jy3);
246 dz33 = _mm256_sub_ps(iz3,jz3);
248 /* Calculate squared distance and things based on it */
249 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
250 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
251 rsq13 = gmx_mm256_calc_rsq_ps(dx13,dy13,dz13);
252 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
253 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
254 rsq23 = gmx_mm256_calc_rsq_ps(dx23,dy23,dz23);
255 rsq31 = gmx_mm256_calc_rsq_ps(dx31,dy31,dz31);
256 rsq32 = gmx_mm256_calc_rsq_ps(dx32,dy32,dz32);
257 rsq33 = gmx_mm256_calc_rsq_ps(dx33,dy33,dz33);
259 rinv11 = gmx_mm256_invsqrt_ps(rsq11);
260 rinv12 = gmx_mm256_invsqrt_ps(rsq12);
261 rinv13 = gmx_mm256_invsqrt_ps(rsq13);
262 rinv21 = gmx_mm256_invsqrt_ps(rsq21);
263 rinv22 = gmx_mm256_invsqrt_ps(rsq22);
264 rinv23 = gmx_mm256_invsqrt_ps(rsq23);
265 rinv31 = gmx_mm256_invsqrt_ps(rsq31);
266 rinv32 = gmx_mm256_invsqrt_ps(rsq32);
267 rinv33 = gmx_mm256_invsqrt_ps(rsq33);
269 fjx1 = _mm256_setzero_ps();
270 fjy1 = _mm256_setzero_ps();
271 fjz1 = _mm256_setzero_ps();
272 fjx2 = _mm256_setzero_ps();
273 fjy2 = _mm256_setzero_ps();
274 fjz2 = _mm256_setzero_ps();
275 fjx3 = _mm256_setzero_ps();
276 fjy3 = _mm256_setzero_ps();
277 fjz3 = _mm256_setzero_ps();
279 /**************************
280 * CALCULATE INTERACTIONS *
281 **************************/
283 r11 = _mm256_mul_ps(rsq11,rinv11);
285 /* Calculate table index by multiplying r with table scale and truncate to integer */
286 rt = _mm256_mul_ps(r11,vftabscale);
287 vfitab = _mm256_cvttps_epi32(rt);
288 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
289 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
290 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
291 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
292 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
293 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
295 /* CUBIC SPLINE TABLE ELECTROSTATICS */
296 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
297 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
298 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
299 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
300 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
301 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
302 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
303 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
304 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
305 Heps = _mm256_mul_ps(vfeps,H);
306 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
307 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
308 velec = _mm256_mul_ps(qq11,VV);
309 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
310 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
312 /* Update potential sum for this i atom from the interaction with this j atom. */
313 velecsum = _mm256_add_ps(velecsum,velec);
317 /* Calculate temporary vectorial force */
318 tx = _mm256_mul_ps(fscal,dx11);
319 ty = _mm256_mul_ps(fscal,dy11);
320 tz = _mm256_mul_ps(fscal,dz11);
322 /* Update vectorial force */
323 fix1 = _mm256_add_ps(fix1,tx);
324 fiy1 = _mm256_add_ps(fiy1,ty);
325 fiz1 = _mm256_add_ps(fiz1,tz);
327 fjx1 = _mm256_add_ps(fjx1,tx);
328 fjy1 = _mm256_add_ps(fjy1,ty);
329 fjz1 = _mm256_add_ps(fjz1,tz);
331 /**************************
332 * CALCULATE INTERACTIONS *
333 **************************/
335 r12 = _mm256_mul_ps(rsq12,rinv12);
337 /* Calculate table index by multiplying r with table scale and truncate to integer */
338 rt = _mm256_mul_ps(r12,vftabscale);
339 vfitab = _mm256_cvttps_epi32(rt);
340 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
341 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
342 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
343 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
344 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
345 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
347 /* CUBIC SPLINE TABLE ELECTROSTATICS */
348 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
349 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
350 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
351 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
352 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
353 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
354 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
355 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
356 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
357 Heps = _mm256_mul_ps(vfeps,H);
358 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
359 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
360 velec = _mm256_mul_ps(qq12,VV);
361 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
362 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
364 /* Update potential sum for this i atom from the interaction with this j atom. */
365 velecsum = _mm256_add_ps(velecsum,velec);
369 /* Calculate temporary vectorial force */
370 tx = _mm256_mul_ps(fscal,dx12);
371 ty = _mm256_mul_ps(fscal,dy12);
372 tz = _mm256_mul_ps(fscal,dz12);
374 /* Update vectorial force */
375 fix1 = _mm256_add_ps(fix1,tx);
376 fiy1 = _mm256_add_ps(fiy1,ty);
377 fiz1 = _mm256_add_ps(fiz1,tz);
379 fjx2 = _mm256_add_ps(fjx2,tx);
380 fjy2 = _mm256_add_ps(fjy2,ty);
381 fjz2 = _mm256_add_ps(fjz2,tz);
383 /**************************
384 * CALCULATE INTERACTIONS *
385 **************************/
387 r13 = _mm256_mul_ps(rsq13,rinv13);
389 /* Calculate table index by multiplying r with table scale and truncate to integer */
390 rt = _mm256_mul_ps(r13,vftabscale);
391 vfitab = _mm256_cvttps_epi32(rt);
392 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
393 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
394 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
395 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
396 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
397 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
399 /* CUBIC SPLINE TABLE ELECTROSTATICS */
400 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
401 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
402 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
403 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
404 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
405 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
406 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
407 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
408 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
409 Heps = _mm256_mul_ps(vfeps,H);
410 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
411 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
412 velec = _mm256_mul_ps(qq13,VV);
413 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
414 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq13,FF),_mm256_mul_ps(vftabscale,rinv13)));
416 /* Update potential sum for this i atom from the interaction with this j atom. */
417 velecsum = _mm256_add_ps(velecsum,velec);
421 /* Calculate temporary vectorial force */
422 tx = _mm256_mul_ps(fscal,dx13);
423 ty = _mm256_mul_ps(fscal,dy13);
424 tz = _mm256_mul_ps(fscal,dz13);
426 /* Update vectorial force */
427 fix1 = _mm256_add_ps(fix1,tx);
428 fiy1 = _mm256_add_ps(fiy1,ty);
429 fiz1 = _mm256_add_ps(fiz1,tz);
431 fjx3 = _mm256_add_ps(fjx3,tx);
432 fjy3 = _mm256_add_ps(fjy3,ty);
433 fjz3 = _mm256_add_ps(fjz3,tz);
435 /**************************
436 * CALCULATE INTERACTIONS *
437 **************************/
439 r21 = _mm256_mul_ps(rsq21,rinv21);
441 /* Calculate table index by multiplying r with table scale and truncate to integer */
442 rt = _mm256_mul_ps(r21,vftabscale);
443 vfitab = _mm256_cvttps_epi32(rt);
444 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
445 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
446 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
447 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
448 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
449 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
451 /* CUBIC SPLINE TABLE ELECTROSTATICS */
452 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
453 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
454 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
455 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
456 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
457 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
458 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
459 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
460 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
461 Heps = _mm256_mul_ps(vfeps,H);
462 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
463 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
464 velec = _mm256_mul_ps(qq21,VV);
465 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
466 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
468 /* Update potential sum for this i atom from the interaction with this j atom. */
469 velecsum = _mm256_add_ps(velecsum,velec);
473 /* Calculate temporary vectorial force */
474 tx = _mm256_mul_ps(fscal,dx21);
475 ty = _mm256_mul_ps(fscal,dy21);
476 tz = _mm256_mul_ps(fscal,dz21);
478 /* Update vectorial force */
479 fix2 = _mm256_add_ps(fix2,tx);
480 fiy2 = _mm256_add_ps(fiy2,ty);
481 fiz2 = _mm256_add_ps(fiz2,tz);
483 fjx1 = _mm256_add_ps(fjx1,tx);
484 fjy1 = _mm256_add_ps(fjy1,ty);
485 fjz1 = _mm256_add_ps(fjz1,tz);
487 /**************************
488 * CALCULATE INTERACTIONS *
489 **************************/
491 r22 = _mm256_mul_ps(rsq22,rinv22);
493 /* Calculate table index by multiplying r with table scale and truncate to integer */
494 rt = _mm256_mul_ps(r22,vftabscale);
495 vfitab = _mm256_cvttps_epi32(rt);
496 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
497 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
498 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
499 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
500 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
501 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
503 /* CUBIC SPLINE TABLE ELECTROSTATICS */
504 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
505 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
506 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
507 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
508 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
509 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
510 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
511 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
512 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
513 Heps = _mm256_mul_ps(vfeps,H);
514 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
515 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
516 velec = _mm256_mul_ps(qq22,VV);
517 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
518 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
520 /* Update potential sum for this i atom from the interaction with this j atom. */
521 velecsum = _mm256_add_ps(velecsum,velec);
525 /* Calculate temporary vectorial force */
526 tx = _mm256_mul_ps(fscal,dx22);
527 ty = _mm256_mul_ps(fscal,dy22);
528 tz = _mm256_mul_ps(fscal,dz22);
530 /* Update vectorial force */
531 fix2 = _mm256_add_ps(fix2,tx);
532 fiy2 = _mm256_add_ps(fiy2,ty);
533 fiz2 = _mm256_add_ps(fiz2,tz);
535 fjx2 = _mm256_add_ps(fjx2,tx);
536 fjy2 = _mm256_add_ps(fjy2,ty);
537 fjz2 = _mm256_add_ps(fjz2,tz);
539 /**************************
540 * CALCULATE INTERACTIONS *
541 **************************/
543 r23 = _mm256_mul_ps(rsq23,rinv23);
545 /* Calculate table index by multiplying r with table scale and truncate to integer */
546 rt = _mm256_mul_ps(r23,vftabscale);
547 vfitab = _mm256_cvttps_epi32(rt);
548 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
549 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
550 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
551 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
552 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
553 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
555 /* CUBIC SPLINE TABLE ELECTROSTATICS */
556 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
557 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
558 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
559 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
560 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
561 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
562 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
563 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
564 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
565 Heps = _mm256_mul_ps(vfeps,H);
566 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
567 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
568 velec = _mm256_mul_ps(qq23,VV);
569 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
570 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq23,FF),_mm256_mul_ps(vftabscale,rinv23)));
572 /* Update potential sum for this i atom from the interaction with this j atom. */
573 velecsum = _mm256_add_ps(velecsum,velec);
577 /* Calculate temporary vectorial force */
578 tx = _mm256_mul_ps(fscal,dx23);
579 ty = _mm256_mul_ps(fscal,dy23);
580 tz = _mm256_mul_ps(fscal,dz23);
582 /* Update vectorial force */
583 fix2 = _mm256_add_ps(fix2,tx);
584 fiy2 = _mm256_add_ps(fiy2,ty);
585 fiz2 = _mm256_add_ps(fiz2,tz);
587 fjx3 = _mm256_add_ps(fjx3,tx);
588 fjy3 = _mm256_add_ps(fjy3,ty);
589 fjz3 = _mm256_add_ps(fjz3,tz);
591 /**************************
592 * CALCULATE INTERACTIONS *
593 **************************/
595 r31 = _mm256_mul_ps(rsq31,rinv31);
597 /* Calculate table index by multiplying r with table scale and truncate to integer */
598 rt = _mm256_mul_ps(r31,vftabscale);
599 vfitab = _mm256_cvttps_epi32(rt);
600 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
601 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
602 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
603 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
604 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
605 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
607 /* CUBIC SPLINE TABLE ELECTROSTATICS */
608 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
609 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
610 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
611 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
612 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
613 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
614 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
615 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
616 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
617 Heps = _mm256_mul_ps(vfeps,H);
618 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
619 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
620 velec = _mm256_mul_ps(qq31,VV);
621 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
622 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq31,FF),_mm256_mul_ps(vftabscale,rinv31)));
624 /* Update potential sum for this i atom from the interaction with this j atom. */
625 velecsum = _mm256_add_ps(velecsum,velec);
629 /* Calculate temporary vectorial force */
630 tx = _mm256_mul_ps(fscal,dx31);
631 ty = _mm256_mul_ps(fscal,dy31);
632 tz = _mm256_mul_ps(fscal,dz31);
634 /* Update vectorial force */
635 fix3 = _mm256_add_ps(fix3,tx);
636 fiy3 = _mm256_add_ps(fiy3,ty);
637 fiz3 = _mm256_add_ps(fiz3,tz);
639 fjx1 = _mm256_add_ps(fjx1,tx);
640 fjy1 = _mm256_add_ps(fjy1,ty);
641 fjz1 = _mm256_add_ps(fjz1,tz);
643 /**************************
644 * CALCULATE INTERACTIONS *
645 **************************/
647 r32 = _mm256_mul_ps(rsq32,rinv32);
649 /* Calculate table index by multiplying r with table scale and truncate to integer */
650 rt = _mm256_mul_ps(r32,vftabscale);
651 vfitab = _mm256_cvttps_epi32(rt);
652 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
653 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
654 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
655 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
656 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
657 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
659 /* CUBIC SPLINE TABLE ELECTROSTATICS */
660 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
661 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
662 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
663 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
664 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
665 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
666 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
667 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
668 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
669 Heps = _mm256_mul_ps(vfeps,H);
670 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
671 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
672 velec = _mm256_mul_ps(qq32,VV);
673 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
674 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq32,FF),_mm256_mul_ps(vftabscale,rinv32)));
676 /* Update potential sum for this i atom from the interaction with this j atom. */
677 velecsum = _mm256_add_ps(velecsum,velec);
681 /* Calculate temporary vectorial force */
682 tx = _mm256_mul_ps(fscal,dx32);
683 ty = _mm256_mul_ps(fscal,dy32);
684 tz = _mm256_mul_ps(fscal,dz32);
686 /* Update vectorial force */
687 fix3 = _mm256_add_ps(fix3,tx);
688 fiy3 = _mm256_add_ps(fiy3,ty);
689 fiz3 = _mm256_add_ps(fiz3,tz);
691 fjx2 = _mm256_add_ps(fjx2,tx);
692 fjy2 = _mm256_add_ps(fjy2,ty);
693 fjz2 = _mm256_add_ps(fjz2,tz);
695 /**************************
696 * CALCULATE INTERACTIONS *
697 **************************/
699 r33 = _mm256_mul_ps(rsq33,rinv33);
701 /* Calculate table index by multiplying r with table scale and truncate to integer */
702 rt = _mm256_mul_ps(r33,vftabscale);
703 vfitab = _mm256_cvttps_epi32(rt);
704 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
705 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
706 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
707 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
708 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
709 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
711 /* CUBIC SPLINE TABLE ELECTROSTATICS */
712 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
713 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
714 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
715 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
716 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
717 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
718 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
719 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
720 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
721 Heps = _mm256_mul_ps(vfeps,H);
722 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
723 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
724 velec = _mm256_mul_ps(qq33,VV);
725 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
726 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq33,FF),_mm256_mul_ps(vftabscale,rinv33)));
728 /* Update potential sum for this i atom from the interaction with this j atom. */
729 velecsum = _mm256_add_ps(velecsum,velec);
733 /* Calculate temporary vectorial force */
734 tx = _mm256_mul_ps(fscal,dx33);
735 ty = _mm256_mul_ps(fscal,dy33);
736 tz = _mm256_mul_ps(fscal,dz33);
738 /* Update vectorial force */
739 fix3 = _mm256_add_ps(fix3,tx);
740 fiy3 = _mm256_add_ps(fiy3,ty);
741 fiz3 = _mm256_add_ps(fiz3,tz);
743 fjx3 = _mm256_add_ps(fjx3,tx);
744 fjy3 = _mm256_add_ps(fjy3,ty);
745 fjz3 = _mm256_add_ps(fjz3,tz);
747 fjptrA = f+j_coord_offsetA;
748 fjptrB = f+j_coord_offsetB;
749 fjptrC = f+j_coord_offsetC;
750 fjptrD = f+j_coord_offsetD;
751 fjptrE = f+j_coord_offsetE;
752 fjptrF = f+j_coord_offsetF;
753 fjptrG = f+j_coord_offsetG;
754 fjptrH = f+j_coord_offsetH;
756 gmx_mm256_decrement_3rvec_8ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
757 fjptrE+DIM,fjptrF+DIM,fjptrG+DIM,fjptrH+DIM,
758 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
760 /* Inner loop uses 387 flops */
766 /* Get j neighbor index, and coordinate index */
767 jnrlistA = jjnr[jidx];
768 jnrlistB = jjnr[jidx+1];
769 jnrlistC = jjnr[jidx+2];
770 jnrlistD = jjnr[jidx+3];
771 jnrlistE = jjnr[jidx+4];
772 jnrlistF = jjnr[jidx+5];
773 jnrlistG = jjnr[jidx+6];
774 jnrlistH = jjnr[jidx+7];
775 /* Sign of each element will be negative for non-real atoms.
776 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
777 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
779 dummy_mask = gmx_mm256_set_m128(gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx+4)),_mm_setzero_si128())),
780 gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128())));
782 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
783 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
784 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
785 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
786 jnrE = (jnrlistE>=0) ? jnrlistE : 0;
787 jnrF = (jnrlistF>=0) ? jnrlistF : 0;
788 jnrG = (jnrlistG>=0) ? jnrlistG : 0;
789 jnrH = (jnrlistH>=0) ? jnrlistH : 0;
790 j_coord_offsetA = DIM*jnrA;
791 j_coord_offsetB = DIM*jnrB;
792 j_coord_offsetC = DIM*jnrC;
793 j_coord_offsetD = DIM*jnrD;
794 j_coord_offsetE = DIM*jnrE;
795 j_coord_offsetF = DIM*jnrF;
796 j_coord_offsetG = DIM*jnrG;
797 j_coord_offsetH = DIM*jnrH;
799 /* load j atom coordinates */
800 gmx_mm256_load_3rvec_8ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
801 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
802 x+j_coord_offsetE+DIM,x+j_coord_offsetF+DIM,
803 x+j_coord_offsetG+DIM,x+j_coord_offsetH+DIM,
804 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
806 /* Calculate displacement vector */
807 dx11 = _mm256_sub_ps(ix1,jx1);
808 dy11 = _mm256_sub_ps(iy1,jy1);
809 dz11 = _mm256_sub_ps(iz1,jz1);
810 dx12 = _mm256_sub_ps(ix1,jx2);
811 dy12 = _mm256_sub_ps(iy1,jy2);
812 dz12 = _mm256_sub_ps(iz1,jz2);
813 dx13 = _mm256_sub_ps(ix1,jx3);
814 dy13 = _mm256_sub_ps(iy1,jy3);
815 dz13 = _mm256_sub_ps(iz1,jz3);
816 dx21 = _mm256_sub_ps(ix2,jx1);
817 dy21 = _mm256_sub_ps(iy2,jy1);
818 dz21 = _mm256_sub_ps(iz2,jz1);
819 dx22 = _mm256_sub_ps(ix2,jx2);
820 dy22 = _mm256_sub_ps(iy2,jy2);
821 dz22 = _mm256_sub_ps(iz2,jz2);
822 dx23 = _mm256_sub_ps(ix2,jx3);
823 dy23 = _mm256_sub_ps(iy2,jy3);
824 dz23 = _mm256_sub_ps(iz2,jz3);
825 dx31 = _mm256_sub_ps(ix3,jx1);
826 dy31 = _mm256_sub_ps(iy3,jy1);
827 dz31 = _mm256_sub_ps(iz3,jz1);
828 dx32 = _mm256_sub_ps(ix3,jx2);
829 dy32 = _mm256_sub_ps(iy3,jy2);
830 dz32 = _mm256_sub_ps(iz3,jz2);
831 dx33 = _mm256_sub_ps(ix3,jx3);
832 dy33 = _mm256_sub_ps(iy3,jy3);
833 dz33 = _mm256_sub_ps(iz3,jz3);
835 /* Calculate squared distance and things based on it */
836 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
837 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
838 rsq13 = gmx_mm256_calc_rsq_ps(dx13,dy13,dz13);
839 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
840 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
841 rsq23 = gmx_mm256_calc_rsq_ps(dx23,dy23,dz23);
842 rsq31 = gmx_mm256_calc_rsq_ps(dx31,dy31,dz31);
843 rsq32 = gmx_mm256_calc_rsq_ps(dx32,dy32,dz32);
844 rsq33 = gmx_mm256_calc_rsq_ps(dx33,dy33,dz33);
846 rinv11 = gmx_mm256_invsqrt_ps(rsq11);
847 rinv12 = gmx_mm256_invsqrt_ps(rsq12);
848 rinv13 = gmx_mm256_invsqrt_ps(rsq13);
849 rinv21 = gmx_mm256_invsqrt_ps(rsq21);
850 rinv22 = gmx_mm256_invsqrt_ps(rsq22);
851 rinv23 = gmx_mm256_invsqrt_ps(rsq23);
852 rinv31 = gmx_mm256_invsqrt_ps(rsq31);
853 rinv32 = gmx_mm256_invsqrt_ps(rsq32);
854 rinv33 = gmx_mm256_invsqrt_ps(rsq33);
856 fjx1 = _mm256_setzero_ps();
857 fjy1 = _mm256_setzero_ps();
858 fjz1 = _mm256_setzero_ps();
859 fjx2 = _mm256_setzero_ps();
860 fjy2 = _mm256_setzero_ps();
861 fjz2 = _mm256_setzero_ps();
862 fjx3 = _mm256_setzero_ps();
863 fjy3 = _mm256_setzero_ps();
864 fjz3 = _mm256_setzero_ps();
866 /**************************
867 * CALCULATE INTERACTIONS *
868 **************************/
870 r11 = _mm256_mul_ps(rsq11,rinv11);
871 r11 = _mm256_andnot_ps(dummy_mask,r11);
873 /* Calculate table index by multiplying r with table scale and truncate to integer */
874 rt = _mm256_mul_ps(r11,vftabscale);
875 vfitab = _mm256_cvttps_epi32(rt);
876 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
877 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
878 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
879 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
880 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
881 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
883 /* CUBIC SPLINE TABLE ELECTROSTATICS */
884 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
885 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
886 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
887 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
888 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
889 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
890 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
891 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
892 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
893 Heps = _mm256_mul_ps(vfeps,H);
894 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
895 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
896 velec = _mm256_mul_ps(qq11,VV);
897 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
898 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
900 /* Update potential sum for this i atom from the interaction with this j atom. */
901 velec = _mm256_andnot_ps(dummy_mask,velec);
902 velecsum = _mm256_add_ps(velecsum,velec);
906 fscal = _mm256_andnot_ps(dummy_mask,fscal);
908 /* Calculate temporary vectorial force */
909 tx = _mm256_mul_ps(fscal,dx11);
910 ty = _mm256_mul_ps(fscal,dy11);
911 tz = _mm256_mul_ps(fscal,dz11);
913 /* Update vectorial force */
914 fix1 = _mm256_add_ps(fix1,tx);
915 fiy1 = _mm256_add_ps(fiy1,ty);
916 fiz1 = _mm256_add_ps(fiz1,tz);
918 fjx1 = _mm256_add_ps(fjx1,tx);
919 fjy1 = _mm256_add_ps(fjy1,ty);
920 fjz1 = _mm256_add_ps(fjz1,tz);
922 /**************************
923 * CALCULATE INTERACTIONS *
924 **************************/
926 r12 = _mm256_mul_ps(rsq12,rinv12);
927 r12 = _mm256_andnot_ps(dummy_mask,r12);
929 /* Calculate table index by multiplying r with table scale and truncate to integer */
930 rt = _mm256_mul_ps(r12,vftabscale);
931 vfitab = _mm256_cvttps_epi32(rt);
932 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
933 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
934 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
935 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
936 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
937 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
939 /* CUBIC SPLINE TABLE ELECTROSTATICS */
940 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
941 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
942 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
943 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
944 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
945 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
946 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
947 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
948 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
949 Heps = _mm256_mul_ps(vfeps,H);
950 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
951 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
952 velec = _mm256_mul_ps(qq12,VV);
953 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
954 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
956 /* Update potential sum for this i atom from the interaction with this j atom. */
957 velec = _mm256_andnot_ps(dummy_mask,velec);
958 velecsum = _mm256_add_ps(velecsum,velec);
962 fscal = _mm256_andnot_ps(dummy_mask,fscal);
964 /* Calculate temporary vectorial force */
965 tx = _mm256_mul_ps(fscal,dx12);
966 ty = _mm256_mul_ps(fscal,dy12);
967 tz = _mm256_mul_ps(fscal,dz12);
969 /* Update vectorial force */
970 fix1 = _mm256_add_ps(fix1,tx);
971 fiy1 = _mm256_add_ps(fiy1,ty);
972 fiz1 = _mm256_add_ps(fiz1,tz);
974 fjx2 = _mm256_add_ps(fjx2,tx);
975 fjy2 = _mm256_add_ps(fjy2,ty);
976 fjz2 = _mm256_add_ps(fjz2,tz);
978 /**************************
979 * CALCULATE INTERACTIONS *
980 **************************/
982 r13 = _mm256_mul_ps(rsq13,rinv13);
983 r13 = _mm256_andnot_ps(dummy_mask,r13);
985 /* Calculate table index by multiplying r with table scale and truncate to integer */
986 rt = _mm256_mul_ps(r13,vftabscale);
987 vfitab = _mm256_cvttps_epi32(rt);
988 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
989 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
990 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
991 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
992 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
993 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
995 /* CUBIC SPLINE TABLE ELECTROSTATICS */
996 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
997 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
998 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
999 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1000 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1001 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1002 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1003 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1004 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1005 Heps = _mm256_mul_ps(vfeps,H);
1006 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1007 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1008 velec = _mm256_mul_ps(qq13,VV);
1009 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1010 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq13,FF),_mm256_mul_ps(vftabscale,rinv13)));
1012 /* Update potential sum for this i atom from the interaction with this j atom. */
1013 velec = _mm256_andnot_ps(dummy_mask,velec);
1014 velecsum = _mm256_add_ps(velecsum,velec);
1018 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1020 /* Calculate temporary vectorial force */
1021 tx = _mm256_mul_ps(fscal,dx13);
1022 ty = _mm256_mul_ps(fscal,dy13);
1023 tz = _mm256_mul_ps(fscal,dz13);
1025 /* Update vectorial force */
1026 fix1 = _mm256_add_ps(fix1,tx);
1027 fiy1 = _mm256_add_ps(fiy1,ty);
1028 fiz1 = _mm256_add_ps(fiz1,tz);
1030 fjx3 = _mm256_add_ps(fjx3,tx);
1031 fjy3 = _mm256_add_ps(fjy3,ty);
1032 fjz3 = _mm256_add_ps(fjz3,tz);
1034 /**************************
1035 * CALCULATE INTERACTIONS *
1036 **************************/
1038 r21 = _mm256_mul_ps(rsq21,rinv21);
1039 r21 = _mm256_andnot_ps(dummy_mask,r21);
1041 /* Calculate table index by multiplying r with table scale and truncate to integer */
1042 rt = _mm256_mul_ps(r21,vftabscale);
1043 vfitab = _mm256_cvttps_epi32(rt);
1044 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1045 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1046 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1047 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1048 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1049 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1051 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1052 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1053 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1054 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1055 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1056 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1057 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1058 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1059 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1060 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1061 Heps = _mm256_mul_ps(vfeps,H);
1062 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1063 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1064 velec = _mm256_mul_ps(qq21,VV);
1065 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1066 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
1068 /* Update potential sum for this i atom from the interaction with this j atom. */
1069 velec = _mm256_andnot_ps(dummy_mask,velec);
1070 velecsum = _mm256_add_ps(velecsum,velec);
1074 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1076 /* Calculate temporary vectorial force */
1077 tx = _mm256_mul_ps(fscal,dx21);
1078 ty = _mm256_mul_ps(fscal,dy21);
1079 tz = _mm256_mul_ps(fscal,dz21);
1081 /* Update vectorial force */
1082 fix2 = _mm256_add_ps(fix2,tx);
1083 fiy2 = _mm256_add_ps(fiy2,ty);
1084 fiz2 = _mm256_add_ps(fiz2,tz);
1086 fjx1 = _mm256_add_ps(fjx1,tx);
1087 fjy1 = _mm256_add_ps(fjy1,ty);
1088 fjz1 = _mm256_add_ps(fjz1,tz);
1090 /**************************
1091 * CALCULATE INTERACTIONS *
1092 **************************/
1094 r22 = _mm256_mul_ps(rsq22,rinv22);
1095 r22 = _mm256_andnot_ps(dummy_mask,r22);
1097 /* Calculate table index by multiplying r with table scale and truncate to integer */
1098 rt = _mm256_mul_ps(r22,vftabscale);
1099 vfitab = _mm256_cvttps_epi32(rt);
1100 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1101 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1102 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1103 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1104 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1105 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1107 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1108 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1109 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1110 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1111 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1112 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1113 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1114 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1115 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1116 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1117 Heps = _mm256_mul_ps(vfeps,H);
1118 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1119 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1120 velec = _mm256_mul_ps(qq22,VV);
1121 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1122 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
1124 /* Update potential sum for this i atom from the interaction with this j atom. */
1125 velec = _mm256_andnot_ps(dummy_mask,velec);
1126 velecsum = _mm256_add_ps(velecsum,velec);
1130 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1132 /* Calculate temporary vectorial force */
1133 tx = _mm256_mul_ps(fscal,dx22);
1134 ty = _mm256_mul_ps(fscal,dy22);
1135 tz = _mm256_mul_ps(fscal,dz22);
1137 /* Update vectorial force */
1138 fix2 = _mm256_add_ps(fix2,tx);
1139 fiy2 = _mm256_add_ps(fiy2,ty);
1140 fiz2 = _mm256_add_ps(fiz2,tz);
1142 fjx2 = _mm256_add_ps(fjx2,tx);
1143 fjy2 = _mm256_add_ps(fjy2,ty);
1144 fjz2 = _mm256_add_ps(fjz2,tz);
1146 /**************************
1147 * CALCULATE INTERACTIONS *
1148 **************************/
1150 r23 = _mm256_mul_ps(rsq23,rinv23);
1151 r23 = _mm256_andnot_ps(dummy_mask,r23);
1153 /* Calculate table index by multiplying r with table scale and truncate to integer */
1154 rt = _mm256_mul_ps(r23,vftabscale);
1155 vfitab = _mm256_cvttps_epi32(rt);
1156 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1157 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1158 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1159 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1160 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1161 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1163 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1164 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1165 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1166 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1167 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1168 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1169 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1170 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1171 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1172 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1173 Heps = _mm256_mul_ps(vfeps,H);
1174 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1175 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1176 velec = _mm256_mul_ps(qq23,VV);
1177 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1178 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq23,FF),_mm256_mul_ps(vftabscale,rinv23)));
1180 /* Update potential sum for this i atom from the interaction with this j atom. */
1181 velec = _mm256_andnot_ps(dummy_mask,velec);
1182 velecsum = _mm256_add_ps(velecsum,velec);
1186 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1188 /* Calculate temporary vectorial force */
1189 tx = _mm256_mul_ps(fscal,dx23);
1190 ty = _mm256_mul_ps(fscal,dy23);
1191 tz = _mm256_mul_ps(fscal,dz23);
1193 /* Update vectorial force */
1194 fix2 = _mm256_add_ps(fix2,tx);
1195 fiy2 = _mm256_add_ps(fiy2,ty);
1196 fiz2 = _mm256_add_ps(fiz2,tz);
1198 fjx3 = _mm256_add_ps(fjx3,tx);
1199 fjy3 = _mm256_add_ps(fjy3,ty);
1200 fjz3 = _mm256_add_ps(fjz3,tz);
1202 /**************************
1203 * CALCULATE INTERACTIONS *
1204 **************************/
1206 r31 = _mm256_mul_ps(rsq31,rinv31);
1207 r31 = _mm256_andnot_ps(dummy_mask,r31);
1209 /* Calculate table index by multiplying r with table scale and truncate to integer */
1210 rt = _mm256_mul_ps(r31,vftabscale);
1211 vfitab = _mm256_cvttps_epi32(rt);
1212 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1213 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1214 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1215 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1216 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1217 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1219 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1220 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1221 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1222 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1223 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1224 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1225 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1226 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1227 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1228 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1229 Heps = _mm256_mul_ps(vfeps,H);
1230 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1231 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1232 velec = _mm256_mul_ps(qq31,VV);
1233 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1234 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq31,FF),_mm256_mul_ps(vftabscale,rinv31)));
1236 /* Update potential sum for this i atom from the interaction with this j atom. */
1237 velec = _mm256_andnot_ps(dummy_mask,velec);
1238 velecsum = _mm256_add_ps(velecsum,velec);
1242 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1244 /* Calculate temporary vectorial force */
1245 tx = _mm256_mul_ps(fscal,dx31);
1246 ty = _mm256_mul_ps(fscal,dy31);
1247 tz = _mm256_mul_ps(fscal,dz31);
1249 /* Update vectorial force */
1250 fix3 = _mm256_add_ps(fix3,tx);
1251 fiy3 = _mm256_add_ps(fiy3,ty);
1252 fiz3 = _mm256_add_ps(fiz3,tz);
1254 fjx1 = _mm256_add_ps(fjx1,tx);
1255 fjy1 = _mm256_add_ps(fjy1,ty);
1256 fjz1 = _mm256_add_ps(fjz1,tz);
1258 /**************************
1259 * CALCULATE INTERACTIONS *
1260 **************************/
1262 r32 = _mm256_mul_ps(rsq32,rinv32);
1263 r32 = _mm256_andnot_ps(dummy_mask,r32);
1265 /* Calculate table index by multiplying r with table scale and truncate to integer */
1266 rt = _mm256_mul_ps(r32,vftabscale);
1267 vfitab = _mm256_cvttps_epi32(rt);
1268 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1269 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1270 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1271 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1272 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1273 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1275 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1276 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1277 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1278 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1279 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1280 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1281 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1282 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1283 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1284 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1285 Heps = _mm256_mul_ps(vfeps,H);
1286 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1287 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1288 velec = _mm256_mul_ps(qq32,VV);
1289 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1290 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq32,FF),_mm256_mul_ps(vftabscale,rinv32)));
1292 /* Update potential sum for this i atom from the interaction with this j atom. */
1293 velec = _mm256_andnot_ps(dummy_mask,velec);
1294 velecsum = _mm256_add_ps(velecsum,velec);
1298 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1300 /* Calculate temporary vectorial force */
1301 tx = _mm256_mul_ps(fscal,dx32);
1302 ty = _mm256_mul_ps(fscal,dy32);
1303 tz = _mm256_mul_ps(fscal,dz32);
1305 /* Update vectorial force */
1306 fix3 = _mm256_add_ps(fix3,tx);
1307 fiy3 = _mm256_add_ps(fiy3,ty);
1308 fiz3 = _mm256_add_ps(fiz3,tz);
1310 fjx2 = _mm256_add_ps(fjx2,tx);
1311 fjy2 = _mm256_add_ps(fjy2,ty);
1312 fjz2 = _mm256_add_ps(fjz2,tz);
1314 /**************************
1315 * CALCULATE INTERACTIONS *
1316 **************************/
1318 r33 = _mm256_mul_ps(rsq33,rinv33);
1319 r33 = _mm256_andnot_ps(dummy_mask,r33);
1321 /* Calculate table index by multiplying r with table scale and truncate to integer */
1322 rt = _mm256_mul_ps(r33,vftabscale);
1323 vfitab = _mm256_cvttps_epi32(rt);
1324 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1325 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1326 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1327 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1328 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1329 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1331 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1332 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1333 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1334 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1335 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1336 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1337 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1338 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1339 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1340 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1341 Heps = _mm256_mul_ps(vfeps,H);
1342 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1343 VV = _mm256_add_ps(Y,_mm256_mul_ps(vfeps,Fp));
1344 velec = _mm256_mul_ps(qq33,VV);
1345 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1346 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq33,FF),_mm256_mul_ps(vftabscale,rinv33)));
1348 /* Update potential sum for this i atom from the interaction with this j atom. */
1349 velec = _mm256_andnot_ps(dummy_mask,velec);
1350 velecsum = _mm256_add_ps(velecsum,velec);
1354 fscal = _mm256_andnot_ps(dummy_mask,fscal);
1356 /* Calculate temporary vectorial force */
1357 tx = _mm256_mul_ps(fscal,dx33);
1358 ty = _mm256_mul_ps(fscal,dy33);
1359 tz = _mm256_mul_ps(fscal,dz33);
1361 /* Update vectorial force */
1362 fix3 = _mm256_add_ps(fix3,tx);
1363 fiy3 = _mm256_add_ps(fiy3,ty);
1364 fiz3 = _mm256_add_ps(fiz3,tz);
1366 fjx3 = _mm256_add_ps(fjx3,tx);
1367 fjy3 = _mm256_add_ps(fjy3,ty);
1368 fjz3 = _mm256_add_ps(fjz3,tz);
1370 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
1371 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
1372 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
1373 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
1374 fjptrE = (jnrlistE>=0) ? f+j_coord_offsetE : scratch;
1375 fjptrF = (jnrlistF>=0) ? f+j_coord_offsetF : scratch;
1376 fjptrG = (jnrlistG>=0) ? f+j_coord_offsetG : scratch;
1377 fjptrH = (jnrlistH>=0) ? f+j_coord_offsetH : scratch;
1379 gmx_mm256_decrement_3rvec_8ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
1380 fjptrE+DIM,fjptrF+DIM,fjptrG+DIM,fjptrH+DIM,
1381 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
1383 /* Inner loop uses 396 flops */
1386 /* End of innermost loop */
1388 gmx_mm256_update_iforce_3atom_swizzle_ps(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
1389 f+i_coord_offset+DIM,fshift+i_shift_offset);
1392 /* Update potential energies */
1393 gmx_mm256_update_1pot_ps(velecsum,kernel_data->energygrp_elec+ggid);
1395 /* Increment number of inner iterations */
1396 inneriter += j_index_end - j_index_start;
1398 /* Outer loop uses 19 flops */
1401 /* Increment number of outer iterations */
1404 /* Update outer/inner flops */
1406 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_VF,outeriter*19 + inneriter*396);
1409 * Gromacs nonbonded kernel: nb_kernel_ElecCSTab_VdwNone_GeomW4W4_F_avx_256_single
1410 * Electrostatics interaction: CubicSplineTable
1411 * VdW interaction: None
1412 * Geometry: Water4-Water4
1413 * Calculate force/pot: Force
1416 nb_kernel_ElecCSTab_VdwNone_GeomW4W4_F_avx_256_single
1417 (t_nblist * gmx_restrict nlist,
1418 rvec * gmx_restrict xx,
1419 rvec * gmx_restrict ff,
1420 t_forcerec * gmx_restrict fr,
1421 t_mdatoms * gmx_restrict mdatoms,
1422 nb_kernel_data_t * gmx_restrict kernel_data,
1423 t_nrnb * gmx_restrict nrnb)
1425 /* Suffixes 0,1,2,3 refer to particle indices for waters in the inner or outer loop, or
1426 * just 0 for non-waters.
1427 * Suffixes A,B,C,D,E,F,G,H refer to j loop unrolling done with AVX, e.g. for the eight different
1428 * jnr indices corresponding to data put in the four positions in the SIMD register.
1430 int i_shift_offset,i_coord_offset,outeriter,inneriter;
1431 int j_index_start,j_index_end,jidx,nri,inr,ggid,iidx;
1432 int jnrA,jnrB,jnrC,jnrD;
1433 int jnrE,jnrF,jnrG,jnrH;
1434 int jnrlistA,jnrlistB,jnrlistC,jnrlistD;
1435 int jnrlistE,jnrlistF,jnrlistG,jnrlistH;
1436 int j_coord_offsetA,j_coord_offsetB,j_coord_offsetC,j_coord_offsetD;
1437 int j_coord_offsetE,j_coord_offsetF,j_coord_offsetG,j_coord_offsetH;
1438 int *iinr,*jindex,*jjnr,*shiftidx,*gid;
1439 real rcutoff_scalar;
1440 real *shiftvec,*fshift,*x,*f;
1441 real *fjptrA,*fjptrB,*fjptrC,*fjptrD,*fjptrE,*fjptrF,*fjptrG,*fjptrH;
1442 real scratch[4*DIM];
1443 __m256 tx,ty,tz,fscal,rcutoff,rcutoff2,jidxall;
1444 real * vdwioffsetptr1;
1445 __m256 ix1,iy1,iz1,fix1,fiy1,fiz1,iq1,isai1;
1446 real * vdwioffsetptr2;
1447 __m256 ix2,iy2,iz2,fix2,fiy2,fiz2,iq2,isai2;
1448 real * vdwioffsetptr3;
1449 __m256 ix3,iy3,iz3,fix3,fiy3,fiz3,iq3,isai3;
1450 int vdwjidx1A,vdwjidx1B,vdwjidx1C,vdwjidx1D,vdwjidx1E,vdwjidx1F,vdwjidx1G,vdwjidx1H;
1451 __m256 jx1,jy1,jz1,fjx1,fjy1,fjz1,jq1,isaj1;
1452 int vdwjidx2A,vdwjidx2B,vdwjidx2C,vdwjidx2D,vdwjidx2E,vdwjidx2F,vdwjidx2G,vdwjidx2H;
1453 __m256 jx2,jy2,jz2,fjx2,fjy2,fjz2,jq2,isaj2;
1454 int vdwjidx3A,vdwjidx3B,vdwjidx3C,vdwjidx3D,vdwjidx3E,vdwjidx3F,vdwjidx3G,vdwjidx3H;
1455 __m256 jx3,jy3,jz3,fjx3,fjy3,fjz3,jq3,isaj3;
1456 __m256 dx11,dy11,dz11,rsq11,rinv11,rinvsq11,r11,qq11,c6_11,c12_11;
1457 __m256 dx12,dy12,dz12,rsq12,rinv12,rinvsq12,r12,qq12,c6_12,c12_12;
1458 __m256 dx13,dy13,dz13,rsq13,rinv13,rinvsq13,r13,qq13,c6_13,c12_13;
1459 __m256 dx21,dy21,dz21,rsq21,rinv21,rinvsq21,r21,qq21,c6_21,c12_21;
1460 __m256 dx22,dy22,dz22,rsq22,rinv22,rinvsq22,r22,qq22,c6_22,c12_22;
1461 __m256 dx23,dy23,dz23,rsq23,rinv23,rinvsq23,r23,qq23,c6_23,c12_23;
1462 __m256 dx31,dy31,dz31,rsq31,rinv31,rinvsq31,r31,qq31,c6_31,c12_31;
1463 __m256 dx32,dy32,dz32,rsq32,rinv32,rinvsq32,r32,qq32,c6_32,c12_32;
1464 __m256 dx33,dy33,dz33,rsq33,rinv33,rinvsq33,r33,qq33,c6_33,c12_33;
1465 __m256 velec,felec,velecsum,facel,crf,krf,krf2;
1468 __m128i vfitab_lo,vfitab_hi;
1469 __m128i ifour = _mm_set1_epi32(4);
1470 __m256 rt,vfeps,vftabscale,Y,F,G,H,Heps,Fp,VV,FF;
1472 __m256 dummy_mask,cutoff_mask;
1473 __m256 signbit = _mm256_castsi256_ps( _mm256_set1_epi32(0x80000000) );
1474 __m256 one = _mm256_set1_ps(1.0);
1475 __m256 two = _mm256_set1_ps(2.0);
1481 jindex = nlist->jindex;
1483 shiftidx = nlist->shift;
1485 shiftvec = fr->shift_vec[0];
1486 fshift = fr->fshift[0];
1487 facel = _mm256_set1_ps(fr->epsfac);
1488 charge = mdatoms->chargeA;
1490 vftab = kernel_data->table_elec->data;
1491 vftabscale = _mm256_set1_ps(kernel_data->table_elec->scale);
1493 /* Setup water-specific parameters */
1494 inr = nlist->iinr[0];
1495 iq1 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+1]));
1496 iq2 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+2]));
1497 iq3 = _mm256_mul_ps(facel,_mm256_set1_ps(charge[inr+3]));
1499 jq1 = _mm256_set1_ps(charge[inr+1]);
1500 jq2 = _mm256_set1_ps(charge[inr+2]);
1501 jq3 = _mm256_set1_ps(charge[inr+3]);
1502 qq11 = _mm256_mul_ps(iq1,jq1);
1503 qq12 = _mm256_mul_ps(iq1,jq2);
1504 qq13 = _mm256_mul_ps(iq1,jq3);
1505 qq21 = _mm256_mul_ps(iq2,jq1);
1506 qq22 = _mm256_mul_ps(iq2,jq2);
1507 qq23 = _mm256_mul_ps(iq2,jq3);
1508 qq31 = _mm256_mul_ps(iq3,jq1);
1509 qq32 = _mm256_mul_ps(iq3,jq2);
1510 qq33 = _mm256_mul_ps(iq3,jq3);
1512 /* Avoid stupid compiler warnings */
1513 jnrA = jnrB = jnrC = jnrD = jnrE = jnrF = jnrG = jnrH = 0;
1514 j_coord_offsetA = 0;
1515 j_coord_offsetB = 0;
1516 j_coord_offsetC = 0;
1517 j_coord_offsetD = 0;
1518 j_coord_offsetE = 0;
1519 j_coord_offsetF = 0;
1520 j_coord_offsetG = 0;
1521 j_coord_offsetH = 0;
1526 for(iidx=0;iidx<4*DIM;iidx++)
1528 scratch[iidx] = 0.0;
1531 /* Start outer loop over neighborlists */
1532 for(iidx=0; iidx<nri; iidx++)
1534 /* Load shift vector for this list */
1535 i_shift_offset = DIM*shiftidx[iidx];
1537 /* Load limits for loop over neighbors */
1538 j_index_start = jindex[iidx];
1539 j_index_end = jindex[iidx+1];
1541 /* Get outer coordinate index */
1543 i_coord_offset = DIM*inr;
1545 /* Load i particle coords and add shift vector */
1546 gmx_mm256_load_shift_and_3rvec_broadcast_ps(shiftvec+i_shift_offset,x+i_coord_offset+DIM,
1547 &ix1,&iy1,&iz1,&ix2,&iy2,&iz2,&ix3,&iy3,&iz3);
1549 fix1 = _mm256_setzero_ps();
1550 fiy1 = _mm256_setzero_ps();
1551 fiz1 = _mm256_setzero_ps();
1552 fix2 = _mm256_setzero_ps();
1553 fiy2 = _mm256_setzero_ps();
1554 fiz2 = _mm256_setzero_ps();
1555 fix3 = _mm256_setzero_ps();
1556 fiy3 = _mm256_setzero_ps();
1557 fiz3 = _mm256_setzero_ps();
1559 /* Start inner kernel loop */
1560 for(jidx=j_index_start; jidx<j_index_end && jjnr[jidx+7]>=0; jidx+=8)
1563 /* Get j neighbor index, and coordinate index */
1565 jnrB = jjnr[jidx+1];
1566 jnrC = jjnr[jidx+2];
1567 jnrD = jjnr[jidx+3];
1568 jnrE = jjnr[jidx+4];
1569 jnrF = jjnr[jidx+5];
1570 jnrG = jjnr[jidx+6];
1571 jnrH = jjnr[jidx+7];
1572 j_coord_offsetA = DIM*jnrA;
1573 j_coord_offsetB = DIM*jnrB;
1574 j_coord_offsetC = DIM*jnrC;
1575 j_coord_offsetD = DIM*jnrD;
1576 j_coord_offsetE = DIM*jnrE;
1577 j_coord_offsetF = DIM*jnrF;
1578 j_coord_offsetG = DIM*jnrG;
1579 j_coord_offsetH = DIM*jnrH;
1581 /* load j atom coordinates */
1582 gmx_mm256_load_3rvec_8ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
1583 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
1584 x+j_coord_offsetE+DIM,x+j_coord_offsetF+DIM,
1585 x+j_coord_offsetG+DIM,x+j_coord_offsetH+DIM,
1586 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
1588 /* Calculate displacement vector */
1589 dx11 = _mm256_sub_ps(ix1,jx1);
1590 dy11 = _mm256_sub_ps(iy1,jy1);
1591 dz11 = _mm256_sub_ps(iz1,jz1);
1592 dx12 = _mm256_sub_ps(ix1,jx2);
1593 dy12 = _mm256_sub_ps(iy1,jy2);
1594 dz12 = _mm256_sub_ps(iz1,jz2);
1595 dx13 = _mm256_sub_ps(ix1,jx3);
1596 dy13 = _mm256_sub_ps(iy1,jy3);
1597 dz13 = _mm256_sub_ps(iz1,jz3);
1598 dx21 = _mm256_sub_ps(ix2,jx1);
1599 dy21 = _mm256_sub_ps(iy2,jy1);
1600 dz21 = _mm256_sub_ps(iz2,jz1);
1601 dx22 = _mm256_sub_ps(ix2,jx2);
1602 dy22 = _mm256_sub_ps(iy2,jy2);
1603 dz22 = _mm256_sub_ps(iz2,jz2);
1604 dx23 = _mm256_sub_ps(ix2,jx3);
1605 dy23 = _mm256_sub_ps(iy2,jy3);
1606 dz23 = _mm256_sub_ps(iz2,jz3);
1607 dx31 = _mm256_sub_ps(ix3,jx1);
1608 dy31 = _mm256_sub_ps(iy3,jy1);
1609 dz31 = _mm256_sub_ps(iz3,jz1);
1610 dx32 = _mm256_sub_ps(ix3,jx2);
1611 dy32 = _mm256_sub_ps(iy3,jy2);
1612 dz32 = _mm256_sub_ps(iz3,jz2);
1613 dx33 = _mm256_sub_ps(ix3,jx3);
1614 dy33 = _mm256_sub_ps(iy3,jy3);
1615 dz33 = _mm256_sub_ps(iz3,jz3);
1617 /* Calculate squared distance and things based on it */
1618 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
1619 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
1620 rsq13 = gmx_mm256_calc_rsq_ps(dx13,dy13,dz13);
1621 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
1622 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
1623 rsq23 = gmx_mm256_calc_rsq_ps(dx23,dy23,dz23);
1624 rsq31 = gmx_mm256_calc_rsq_ps(dx31,dy31,dz31);
1625 rsq32 = gmx_mm256_calc_rsq_ps(dx32,dy32,dz32);
1626 rsq33 = gmx_mm256_calc_rsq_ps(dx33,dy33,dz33);
1628 rinv11 = gmx_mm256_invsqrt_ps(rsq11);
1629 rinv12 = gmx_mm256_invsqrt_ps(rsq12);
1630 rinv13 = gmx_mm256_invsqrt_ps(rsq13);
1631 rinv21 = gmx_mm256_invsqrt_ps(rsq21);
1632 rinv22 = gmx_mm256_invsqrt_ps(rsq22);
1633 rinv23 = gmx_mm256_invsqrt_ps(rsq23);
1634 rinv31 = gmx_mm256_invsqrt_ps(rsq31);
1635 rinv32 = gmx_mm256_invsqrt_ps(rsq32);
1636 rinv33 = gmx_mm256_invsqrt_ps(rsq33);
1638 fjx1 = _mm256_setzero_ps();
1639 fjy1 = _mm256_setzero_ps();
1640 fjz1 = _mm256_setzero_ps();
1641 fjx2 = _mm256_setzero_ps();
1642 fjy2 = _mm256_setzero_ps();
1643 fjz2 = _mm256_setzero_ps();
1644 fjx3 = _mm256_setzero_ps();
1645 fjy3 = _mm256_setzero_ps();
1646 fjz3 = _mm256_setzero_ps();
1648 /**************************
1649 * CALCULATE INTERACTIONS *
1650 **************************/
1652 r11 = _mm256_mul_ps(rsq11,rinv11);
1654 /* Calculate table index by multiplying r with table scale and truncate to integer */
1655 rt = _mm256_mul_ps(r11,vftabscale);
1656 vfitab = _mm256_cvttps_epi32(rt);
1657 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1658 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1659 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1660 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1661 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1662 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1664 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1665 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1666 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1667 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1668 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1669 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1670 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1671 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1672 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1673 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1674 Heps = _mm256_mul_ps(vfeps,H);
1675 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1676 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1677 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
1681 /* Calculate temporary vectorial force */
1682 tx = _mm256_mul_ps(fscal,dx11);
1683 ty = _mm256_mul_ps(fscal,dy11);
1684 tz = _mm256_mul_ps(fscal,dz11);
1686 /* Update vectorial force */
1687 fix1 = _mm256_add_ps(fix1,tx);
1688 fiy1 = _mm256_add_ps(fiy1,ty);
1689 fiz1 = _mm256_add_ps(fiz1,tz);
1691 fjx1 = _mm256_add_ps(fjx1,tx);
1692 fjy1 = _mm256_add_ps(fjy1,ty);
1693 fjz1 = _mm256_add_ps(fjz1,tz);
1695 /**************************
1696 * CALCULATE INTERACTIONS *
1697 **************************/
1699 r12 = _mm256_mul_ps(rsq12,rinv12);
1701 /* Calculate table index by multiplying r with table scale and truncate to integer */
1702 rt = _mm256_mul_ps(r12,vftabscale);
1703 vfitab = _mm256_cvttps_epi32(rt);
1704 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1705 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1706 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1707 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1708 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1709 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1711 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1712 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1713 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1714 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1715 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1716 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1717 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1718 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1719 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1720 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1721 Heps = _mm256_mul_ps(vfeps,H);
1722 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1723 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1724 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
1728 /* Calculate temporary vectorial force */
1729 tx = _mm256_mul_ps(fscal,dx12);
1730 ty = _mm256_mul_ps(fscal,dy12);
1731 tz = _mm256_mul_ps(fscal,dz12);
1733 /* Update vectorial force */
1734 fix1 = _mm256_add_ps(fix1,tx);
1735 fiy1 = _mm256_add_ps(fiy1,ty);
1736 fiz1 = _mm256_add_ps(fiz1,tz);
1738 fjx2 = _mm256_add_ps(fjx2,tx);
1739 fjy2 = _mm256_add_ps(fjy2,ty);
1740 fjz2 = _mm256_add_ps(fjz2,tz);
1742 /**************************
1743 * CALCULATE INTERACTIONS *
1744 **************************/
1746 r13 = _mm256_mul_ps(rsq13,rinv13);
1748 /* Calculate table index by multiplying r with table scale and truncate to integer */
1749 rt = _mm256_mul_ps(r13,vftabscale);
1750 vfitab = _mm256_cvttps_epi32(rt);
1751 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1752 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1753 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1754 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1755 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1756 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1758 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1759 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1760 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1761 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1762 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1763 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1764 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1765 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1766 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1767 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1768 Heps = _mm256_mul_ps(vfeps,H);
1769 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1770 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1771 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq13,FF),_mm256_mul_ps(vftabscale,rinv13)));
1775 /* Calculate temporary vectorial force */
1776 tx = _mm256_mul_ps(fscal,dx13);
1777 ty = _mm256_mul_ps(fscal,dy13);
1778 tz = _mm256_mul_ps(fscal,dz13);
1780 /* Update vectorial force */
1781 fix1 = _mm256_add_ps(fix1,tx);
1782 fiy1 = _mm256_add_ps(fiy1,ty);
1783 fiz1 = _mm256_add_ps(fiz1,tz);
1785 fjx3 = _mm256_add_ps(fjx3,tx);
1786 fjy3 = _mm256_add_ps(fjy3,ty);
1787 fjz3 = _mm256_add_ps(fjz3,tz);
1789 /**************************
1790 * CALCULATE INTERACTIONS *
1791 **************************/
1793 r21 = _mm256_mul_ps(rsq21,rinv21);
1795 /* Calculate table index by multiplying r with table scale and truncate to integer */
1796 rt = _mm256_mul_ps(r21,vftabscale);
1797 vfitab = _mm256_cvttps_epi32(rt);
1798 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1799 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1800 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1801 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1802 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1803 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1805 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1806 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1807 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1808 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1809 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1810 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1811 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1812 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1813 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1814 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1815 Heps = _mm256_mul_ps(vfeps,H);
1816 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1817 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1818 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
1822 /* Calculate temporary vectorial force */
1823 tx = _mm256_mul_ps(fscal,dx21);
1824 ty = _mm256_mul_ps(fscal,dy21);
1825 tz = _mm256_mul_ps(fscal,dz21);
1827 /* Update vectorial force */
1828 fix2 = _mm256_add_ps(fix2,tx);
1829 fiy2 = _mm256_add_ps(fiy2,ty);
1830 fiz2 = _mm256_add_ps(fiz2,tz);
1832 fjx1 = _mm256_add_ps(fjx1,tx);
1833 fjy1 = _mm256_add_ps(fjy1,ty);
1834 fjz1 = _mm256_add_ps(fjz1,tz);
1836 /**************************
1837 * CALCULATE INTERACTIONS *
1838 **************************/
1840 r22 = _mm256_mul_ps(rsq22,rinv22);
1842 /* Calculate table index by multiplying r with table scale and truncate to integer */
1843 rt = _mm256_mul_ps(r22,vftabscale);
1844 vfitab = _mm256_cvttps_epi32(rt);
1845 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1846 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1847 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1848 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1849 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1850 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1852 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1853 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1854 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1855 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1856 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1857 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1858 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1859 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1860 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1861 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1862 Heps = _mm256_mul_ps(vfeps,H);
1863 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1864 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1865 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
1869 /* Calculate temporary vectorial force */
1870 tx = _mm256_mul_ps(fscal,dx22);
1871 ty = _mm256_mul_ps(fscal,dy22);
1872 tz = _mm256_mul_ps(fscal,dz22);
1874 /* Update vectorial force */
1875 fix2 = _mm256_add_ps(fix2,tx);
1876 fiy2 = _mm256_add_ps(fiy2,ty);
1877 fiz2 = _mm256_add_ps(fiz2,tz);
1879 fjx2 = _mm256_add_ps(fjx2,tx);
1880 fjy2 = _mm256_add_ps(fjy2,ty);
1881 fjz2 = _mm256_add_ps(fjz2,tz);
1883 /**************************
1884 * CALCULATE INTERACTIONS *
1885 **************************/
1887 r23 = _mm256_mul_ps(rsq23,rinv23);
1889 /* Calculate table index by multiplying r with table scale and truncate to integer */
1890 rt = _mm256_mul_ps(r23,vftabscale);
1891 vfitab = _mm256_cvttps_epi32(rt);
1892 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1893 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1894 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1895 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1896 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1897 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1899 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1900 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1901 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1902 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1903 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1904 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1905 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1906 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1907 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1908 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1909 Heps = _mm256_mul_ps(vfeps,H);
1910 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1911 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1912 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq23,FF),_mm256_mul_ps(vftabscale,rinv23)));
1916 /* Calculate temporary vectorial force */
1917 tx = _mm256_mul_ps(fscal,dx23);
1918 ty = _mm256_mul_ps(fscal,dy23);
1919 tz = _mm256_mul_ps(fscal,dz23);
1921 /* Update vectorial force */
1922 fix2 = _mm256_add_ps(fix2,tx);
1923 fiy2 = _mm256_add_ps(fiy2,ty);
1924 fiz2 = _mm256_add_ps(fiz2,tz);
1926 fjx3 = _mm256_add_ps(fjx3,tx);
1927 fjy3 = _mm256_add_ps(fjy3,ty);
1928 fjz3 = _mm256_add_ps(fjz3,tz);
1930 /**************************
1931 * CALCULATE INTERACTIONS *
1932 **************************/
1934 r31 = _mm256_mul_ps(rsq31,rinv31);
1936 /* Calculate table index by multiplying r with table scale and truncate to integer */
1937 rt = _mm256_mul_ps(r31,vftabscale);
1938 vfitab = _mm256_cvttps_epi32(rt);
1939 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1940 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1941 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1942 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1943 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1944 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1946 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1947 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1948 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1949 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1950 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1951 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1952 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
1953 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
1954 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
1955 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
1956 Heps = _mm256_mul_ps(vfeps,H);
1957 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
1958 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
1959 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq31,FF),_mm256_mul_ps(vftabscale,rinv31)));
1963 /* Calculate temporary vectorial force */
1964 tx = _mm256_mul_ps(fscal,dx31);
1965 ty = _mm256_mul_ps(fscal,dy31);
1966 tz = _mm256_mul_ps(fscal,dz31);
1968 /* Update vectorial force */
1969 fix3 = _mm256_add_ps(fix3,tx);
1970 fiy3 = _mm256_add_ps(fiy3,ty);
1971 fiz3 = _mm256_add_ps(fiz3,tz);
1973 fjx1 = _mm256_add_ps(fjx1,tx);
1974 fjy1 = _mm256_add_ps(fjy1,ty);
1975 fjz1 = _mm256_add_ps(fjz1,tz);
1977 /**************************
1978 * CALCULATE INTERACTIONS *
1979 **************************/
1981 r32 = _mm256_mul_ps(rsq32,rinv32);
1983 /* Calculate table index by multiplying r with table scale and truncate to integer */
1984 rt = _mm256_mul_ps(r32,vftabscale);
1985 vfitab = _mm256_cvttps_epi32(rt);
1986 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
1987 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
1988 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
1989 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
1990 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
1991 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
1993 /* CUBIC SPLINE TABLE ELECTROSTATICS */
1994 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
1995 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
1996 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
1997 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
1998 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
1999 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2000 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2001 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2002 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2003 Heps = _mm256_mul_ps(vfeps,H);
2004 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2005 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2006 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq32,FF),_mm256_mul_ps(vftabscale,rinv32)));
2010 /* Calculate temporary vectorial force */
2011 tx = _mm256_mul_ps(fscal,dx32);
2012 ty = _mm256_mul_ps(fscal,dy32);
2013 tz = _mm256_mul_ps(fscal,dz32);
2015 /* Update vectorial force */
2016 fix3 = _mm256_add_ps(fix3,tx);
2017 fiy3 = _mm256_add_ps(fiy3,ty);
2018 fiz3 = _mm256_add_ps(fiz3,tz);
2020 fjx2 = _mm256_add_ps(fjx2,tx);
2021 fjy2 = _mm256_add_ps(fjy2,ty);
2022 fjz2 = _mm256_add_ps(fjz2,tz);
2024 /**************************
2025 * CALCULATE INTERACTIONS *
2026 **************************/
2028 r33 = _mm256_mul_ps(rsq33,rinv33);
2030 /* Calculate table index by multiplying r with table scale and truncate to integer */
2031 rt = _mm256_mul_ps(r33,vftabscale);
2032 vfitab = _mm256_cvttps_epi32(rt);
2033 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2034 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2035 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2036 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2037 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2038 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2040 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2041 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2042 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2043 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2044 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2045 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2046 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2047 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2048 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2049 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2050 Heps = _mm256_mul_ps(vfeps,H);
2051 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2052 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2053 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq33,FF),_mm256_mul_ps(vftabscale,rinv33)));
2057 /* Calculate temporary vectorial force */
2058 tx = _mm256_mul_ps(fscal,dx33);
2059 ty = _mm256_mul_ps(fscal,dy33);
2060 tz = _mm256_mul_ps(fscal,dz33);
2062 /* Update vectorial force */
2063 fix3 = _mm256_add_ps(fix3,tx);
2064 fiy3 = _mm256_add_ps(fiy3,ty);
2065 fiz3 = _mm256_add_ps(fiz3,tz);
2067 fjx3 = _mm256_add_ps(fjx3,tx);
2068 fjy3 = _mm256_add_ps(fjy3,ty);
2069 fjz3 = _mm256_add_ps(fjz3,tz);
2071 fjptrA = f+j_coord_offsetA;
2072 fjptrB = f+j_coord_offsetB;
2073 fjptrC = f+j_coord_offsetC;
2074 fjptrD = f+j_coord_offsetD;
2075 fjptrE = f+j_coord_offsetE;
2076 fjptrF = f+j_coord_offsetF;
2077 fjptrG = f+j_coord_offsetG;
2078 fjptrH = f+j_coord_offsetH;
2080 gmx_mm256_decrement_3rvec_8ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
2081 fjptrE+DIM,fjptrF+DIM,fjptrG+DIM,fjptrH+DIM,
2082 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
2084 /* Inner loop uses 351 flops */
2087 if(jidx<j_index_end)
2090 /* Get j neighbor index, and coordinate index */
2091 jnrlistA = jjnr[jidx];
2092 jnrlistB = jjnr[jidx+1];
2093 jnrlistC = jjnr[jidx+2];
2094 jnrlistD = jjnr[jidx+3];
2095 jnrlistE = jjnr[jidx+4];
2096 jnrlistF = jjnr[jidx+5];
2097 jnrlistG = jjnr[jidx+6];
2098 jnrlistH = jjnr[jidx+7];
2099 /* Sign of each element will be negative for non-real atoms.
2100 * This mask will be 0xFFFFFFFF for dummy entries and 0x0 for real ones,
2101 * so use it as val = _mm_andnot_ps(mask,val) to clear dummy entries.
2103 dummy_mask = gmx_mm256_set_m128(gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx+4)),_mm_setzero_si128())),
2104 gmx_mm_castsi128_ps(_mm_cmplt_epi32(_mm_loadu_si128((const __m128i *)(jjnr+jidx)),_mm_setzero_si128())));
2106 jnrA = (jnrlistA>=0) ? jnrlistA : 0;
2107 jnrB = (jnrlistB>=0) ? jnrlistB : 0;
2108 jnrC = (jnrlistC>=0) ? jnrlistC : 0;
2109 jnrD = (jnrlistD>=0) ? jnrlistD : 0;
2110 jnrE = (jnrlistE>=0) ? jnrlistE : 0;
2111 jnrF = (jnrlistF>=0) ? jnrlistF : 0;
2112 jnrG = (jnrlistG>=0) ? jnrlistG : 0;
2113 jnrH = (jnrlistH>=0) ? jnrlistH : 0;
2114 j_coord_offsetA = DIM*jnrA;
2115 j_coord_offsetB = DIM*jnrB;
2116 j_coord_offsetC = DIM*jnrC;
2117 j_coord_offsetD = DIM*jnrD;
2118 j_coord_offsetE = DIM*jnrE;
2119 j_coord_offsetF = DIM*jnrF;
2120 j_coord_offsetG = DIM*jnrG;
2121 j_coord_offsetH = DIM*jnrH;
2123 /* load j atom coordinates */
2124 gmx_mm256_load_3rvec_8ptr_swizzle_ps(x+j_coord_offsetA+DIM,x+j_coord_offsetB+DIM,
2125 x+j_coord_offsetC+DIM,x+j_coord_offsetD+DIM,
2126 x+j_coord_offsetE+DIM,x+j_coord_offsetF+DIM,
2127 x+j_coord_offsetG+DIM,x+j_coord_offsetH+DIM,
2128 &jx1,&jy1,&jz1,&jx2,&jy2,&jz2,&jx3,&jy3,&jz3);
2130 /* Calculate displacement vector */
2131 dx11 = _mm256_sub_ps(ix1,jx1);
2132 dy11 = _mm256_sub_ps(iy1,jy1);
2133 dz11 = _mm256_sub_ps(iz1,jz1);
2134 dx12 = _mm256_sub_ps(ix1,jx2);
2135 dy12 = _mm256_sub_ps(iy1,jy2);
2136 dz12 = _mm256_sub_ps(iz1,jz2);
2137 dx13 = _mm256_sub_ps(ix1,jx3);
2138 dy13 = _mm256_sub_ps(iy1,jy3);
2139 dz13 = _mm256_sub_ps(iz1,jz3);
2140 dx21 = _mm256_sub_ps(ix2,jx1);
2141 dy21 = _mm256_sub_ps(iy2,jy1);
2142 dz21 = _mm256_sub_ps(iz2,jz1);
2143 dx22 = _mm256_sub_ps(ix2,jx2);
2144 dy22 = _mm256_sub_ps(iy2,jy2);
2145 dz22 = _mm256_sub_ps(iz2,jz2);
2146 dx23 = _mm256_sub_ps(ix2,jx3);
2147 dy23 = _mm256_sub_ps(iy2,jy3);
2148 dz23 = _mm256_sub_ps(iz2,jz3);
2149 dx31 = _mm256_sub_ps(ix3,jx1);
2150 dy31 = _mm256_sub_ps(iy3,jy1);
2151 dz31 = _mm256_sub_ps(iz3,jz1);
2152 dx32 = _mm256_sub_ps(ix3,jx2);
2153 dy32 = _mm256_sub_ps(iy3,jy2);
2154 dz32 = _mm256_sub_ps(iz3,jz2);
2155 dx33 = _mm256_sub_ps(ix3,jx3);
2156 dy33 = _mm256_sub_ps(iy3,jy3);
2157 dz33 = _mm256_sub_ps(iz3,jz3);
2159 /* Calculate squared distance and things based on it */
2160 rsq11 = gmx_mm256_calc_rsq_ps(dx11,dy11,dz11);
2161 rsq12 = gmx_mm256_calc_rsq_ps(dx12,dy12,dz12);
2162 rsq13 = gmx_mm256_calc_rsq_ps(dx13,dy13,dz13);
2163 rsq21 = gmx_mm256_calc_rsq_ps(dx21,dy21,dz21);
2164 rsq22 = gmx_mm256_calc_rsq_ps(dx22,dy22,dz22);
2165 rsq23 = gmx_mm256_calc_rsq_ps(dx23,dy23,dz23);
2166 rsq31 = gmx_mm256_calc_rsq_ps(dx31,dy31,dz31);
2167 rsq32 = gmx_mm256_calc_rsq_ps(dx32,dy32,dz32);
2168 rsq33 = gmx_mm256_calc_rsq_ps(dx33,dy33,dz33);
2170 rinv11 = gmx_mm256_invsqrt_ps(rsq11);
2171 rinv12 = gmx_mm256_invsqrt_ps(rsq12);
2172 rinv13 = gmx_mm256_invsqrt_ps(rsq13);
2173 rinv21 = gmx_mm256_invsqrt_ps(rsq21);
2174 rinv22 = gmx_mm256_invsqrt_ps(rsq22);
2175 rinv23 = gmx_mm256_invsqrt_ps(rsq23);
2176 rinv31 = gmx_mm256_invsqrt_ps(rsq31);
2177 rinv32 = gmx_mm256_invsqrt_ps(rsq32);
2178 rinv33 = gmx_mm256_invsqrt_ps(rsq33);
2180 fjx1 = _mm256_setzero_ps();
2181 fjy1 = _mm256_setzero_ps();
2182 fjz1 = _mm256_setzero_ps();
2183 fjx2 = _mm256_setzero_ps();
2184 fjy2 = _mm256_setzero_ps();
2185 fjz2 = _mm256_setzero_ps();
2186 fjx3 = _mm256_setzero_ps();
2187 fjy3 = _mm256_setzero_ps();
2188 fjz3 = _mm256_setzero_ps();
2190 /**************************
2191 * CALCULATE INTERACTIONS *
2192 **************************/
2194 r11 = _mm256_mul_ps(rsq11,rinv11);
2195 r11 = _mm256_andnot_ps(dummy_mask,r11);
2197 /* Calculate table index by multiplying r with table scale and truncate to integer */
2198 rt = _mm256_mul_ps(r11,vftabscale);
2199 vfitab = _mm256_cvttps_epi32(rt);
2200 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2201 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2202 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2203 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2204 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2205 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2207 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2208 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2209 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2210 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2211 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2212 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2213 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2214 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2215 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2216 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2217 Heps = _mm256_mul_ps(vfeps,H);
2218 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2219 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2220 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq11,FF),_mm256_mul_ps(vftabscale,rinv11)));
2224 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2226 /* Calculate temporary vectorial force */
2227 tx = _mm256_mul_ps(fscal,dx11);
2228 ty = _mm256_mul_ps(fscal,dy11);
2229 tz = _mm256_mul_ps(fscal,dz11);
2231 /* Update vectorial force */
2232 fix1 = _mm256_add_ps(fix1,tx);
2233 fiy1 = _mm256_add_ps(fiy1,ty);
2234 fiz1 = _mm256_add_ps(fiz1,tz);
2236 fjx1 = _mm256_add_ps(fjx1,tx);
2237 fjy1 = _mm256_add_ps(fjy1,ty);
2238 fjz1 = _mm256_add_ps(fjz1,tz);
2240 /**************************
2241 * CALCULATE INTERACTIONS *
2242 **************************/
2244 r12 = _mm256_mul_ps(rsq12,rinv12);
2245 r12 = _mm256_andnot_ps(dummy_mask,r12);
2247 /* Calculate table index by multiplying r with table scale and truncate to integer */
2248 rt = _mm256_mul_ps(r12,vftabscale);
2249 vfitab = _mm256_cvttps_epi32(rt);
2250 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2251 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2252 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2253 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2254 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2255 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2257 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2258 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2259 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2260 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2261 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2262 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2263 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2264 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2265 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2266 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2267 Heps = _mm256_mul_ps(vfeps,H);
2268 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2269 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2270 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq12,FF),_mm256_mul_ps(vftabscale,rinv12)));
2274 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2276 /* Calculate temporary vectorial force */
2277 tx = _mm256_mul_ps(fscal,dx12);
2278 ty = _mm256_mul_ps(fscal,dy12);
2279 tz = _mm256_mul_ps(fscal,dz12);
2281 /* Update vectorial force */
2282 fix1 = _mm256_add_ps(fix1,tx);
2283 fiy1 = _mm256_add_ps(fiy1,ty);
2284 fiz1 = _mm256_add_ps(fiz1,tz);
2286 fjx2 = _mm256_add_ps(fjx2,tx);
2287 fjy2 = _mm256_add_ps(fjy2,ty);
2288 fjz2 = _mm256_add_ps(fjz2,tz);
2290 /**************************
2291 * CALCULATE INTERACTIONS *
2292 **************************/
2294 r13 = _mm256_mul_ps(rsq13,rinv13);
2295 r13 = _mm256_andnot_ps(dummy_mask,r13);
2297 /* Calculate table index by multiplying r with table scale and truncate to integer */
2298 rt = _mm256_mul_ps(r13,vftabscale);
2299 vfitab = _mm256_cvttps_epi32(rt);
2300 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2301 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2302 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2303 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2304 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2305 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2307 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2308 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2309 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2310 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2311 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2312 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2313 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2314 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2315 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2316 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2317 Heps = _mm256_mul_ps(vfeps,H);
2318 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2319 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2320 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq13,FF),_mm256_mul_ps(vftabscale,rinv13)));
2324 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2326 /* Calculate temporary vectorial force */
2327 tx = _mm256_mul_ps(fscal,dx13);
2328 ty = _mm256_mul_ps(fscal,dy13);
2329 tz = _mm256_mul_ps(fscal,dz13);
2331 /* Update vectorial force */
2332 fix1 = _mm256_add_ps(fix1,tx);
2333 fiy1 = _mm256_add_ps(fiy1,ty);
2334 fiz1 = _mm256_add_ps(fiz1,tz);
2336 fjx3 = _mm256_add_ps(fjx3,tx);
2337 fjy3 = _mm256_add_ps(fjy3,ty);
2338 fjz3 = _mm256_add_ps(fjz3,tz);
2340 /**************************
2341 * CALCULATE INTERACTIONS *
2342 **************************/
2344 r21 = _mm256_mul_ps(rsq21,rinv21);
2345 r21 = _mm256_andnot_ps(dummy_mask,r21);
2347 /* Calculate table index by multiplying r with table scale and truncate to integer */
2348 rt = _mm256_mul_ps(r21,vftabscale);
2349 vfitab = _mm256_cvttps_epi32(rt);
2350 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2351 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2352 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2353 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2354 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2355 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2357 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2358 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2359 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2360 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2361 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2362 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2363 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2364 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2365 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2366 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2367 Heps = _mm256_mul_ps(vfeps,H);
2368 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2369 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2370 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq21,FF),_mm256_mul_ps(vftabscale,rinv21)));
2374 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2376 /* Calculate temporary vectorial force */
2377 tx = _mm256_mul_ps(fscal,dx21);
2378 ty = _mm256_mul_ps(fscal,dy21);
2379 tz = _mm256_mul_ps(fscal,dz21);
2381 /* Update vectorial force */
2382 fix2 = _mm256_add_ps(fix2,tx);
2383 fiy2 = _mm256_add_ps(fiy2,ty);
2384 fiz2 = _mm256_add_ps(fiz2,tz);
2386 fjx1 = _mm256_add_ps(fjx1,tx);
2387 fjy1 = _mm256_add_ps(fjy1,ty);
2388 fjz1 = _mm256_add_ps(fjz1,tz);
2390 /**************************
2391 * CALCULATE INTERACTIONS *
2392 **************************/
2394 r22 = _mm256_mul_ps(rsq22,rinv22);
2395 r22 = _mm256_andnot_ps(dummy_mask,r22);
2397 /* Calculate table index by multiplying r with table scale and truncate to integer */
2398 rt = _mm256_mul_ps(r22,vftabscale);
2399 vfitab = _mm256_cvttps_epi32(rt);
2400 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2401 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2402 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2403 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2404 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2405 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2407 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2408 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2409 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2410 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2411 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2412 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2413 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2414 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2415 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2416 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2417 Heps = _mm256_mul_ps(vfeps,H);
2418 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2419 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2420 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq22,FF),_mm256_mul_ps(vftabscale,rinv22)));
2424 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2426 /* Calculate temporary vectorial force */
2427 tx = _mm256_mul_ps(fscal,dx22);
2428 ty = _mm256_mul_ps(fscal,dy22);
2429 tz = _mm256_mul_ps(fscal,dz22);
2431 /* Update vectorial force */
2432 fix2 = _mm256_add_ps(fix2,tx);
2433 fiy2 = _mm256_add_ps(fiy2,ty);
2434 fiz2 = _mm256_add_ps(fiz2,tz);
2436 fjx2 = _mm256_add_ps(fjx2,tx);
2437 fjy2 = _mm256_add_ps(fjy2,ty);
2438 fjz2 = _mm256_add_ps(fjz2,tz);
2440 /**************************
2441 * CALCULATE INTERACTIONS *
2442 **************************/
2444 r23 = _mm256_mul_ps(rsq23,rinv23);
2445 r23 = _mm256_andnot_ps(dummy_mask,r23);
2447 /* Calculate table index by multiplying r with table scale and truncate to integer */
2448 rt = _mm256_mul_ps(r23,vftabscale);
2449 vfitab = _mm256_cvttps_epi32(rt);
2450 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2451 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2452 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2453 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2454 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2455 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2457 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2458 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2459 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2460 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2461 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2462 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2463 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2464 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2465 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2466 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2467 Heps = _mm256_mul_ps(vfeps,H);
2468 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2469 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2470 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq23,FF),_mm256_mul_ps(vftabscale,rinv23)));
2474 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2476 /* Calculate temporary vectorial force */
2477 tx = _mm256_mul_ps(fscal,dx23);
2478 ty = _mm256_mul_ps(fscal,dy23);
2479 tz = _mm256_mul_ps(fscal,dz23);
2481 /* Update vectorial force */
2482 fix2 = _mm256_add_ps(fix2,tx);
2483 fiy2 = _mm256_add_ps(fiy2,ty);
2484 fiz2 = _mm256_add_ps(fiz2,tz);
2486 fjx3 = _mm256_add_ps(fjx3,tx);
2487 fjy3 = _mm256_add_ps(fjy3,ty);
2488 fjz3 = _mm256_add_ps(fjz3,tz);
2490 /**************************
2491 * CALCULATE INTERACTIONS *
2492 **************************/
2494 r31 = _mm256_mul_ps(rsq31,rinv31);
2495 r31 = _mm256_andnot_ps(dummy_mask,r31);
2497 /* Calculate table index by multiplying r with table scale and truncate to integer */
2498 rt = _mm256_mul_ps(r31,vftabscale);
2499 vfitab = _mm256_cvttps_epi32(rt);
2500 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2501 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2502 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2503 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2504 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2505 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2507 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2508 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2509 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2510 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2511 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2512 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2513 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2514 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2515 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2516 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2517 Heps = _mm256_mul_ps(vfeps,H);
2518 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2519 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2520 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq31,FF),_mm256_mul_ps(vftabscale,rinv31)));
2524 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2526 /* Calculate temporary vectorial force */
2527 tx = _mm256_mul_ps(fscal,dx31);
2528 ty = _mm256_mul_ps(fscal,dy31);
2529 tz = _mm256_mul_ps(fscal,dz31);
2531 /* Update vectorial force */
2532 fix3 = _mm256_add_ps(fix3,tx);
2533 fiy3 = _mm256_add_ps(fiy3,ty);
2534 fiz3 = _mm256_add_ps(fiz3,tz);
2536 fjx1 = _mm256_add_ps(fjx1,tx);
2537 fjy1 = _mm256_add_ps(fjy1,ty);
2538 fjz1 = _mm256_add_ps(fjz1,tz);
2540 /**************************
2541 * CALCULATE INTERACTIONS *
2542 **************************/
2544 r32 = _mm256_mul_ps(rsq32,rinv32);
2545 r32 = _mm256_andnot_ps(dummy_mask,r32);
2547 /* Calculate table index by multiplying r with table scale and truncate to integer */
2548 rt = _mm256_mul_ps(r32,vftabscale);
2549 vfitab = _mm256_cvttps_epi32(rt);
2550 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2551 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2552 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2553 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2554 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2555 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2557 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2558 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2559 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2560 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2561 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2562 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2563 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2564 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2565 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2566 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2567 Heps = _mm256_mul_ps(vfeps,H);
2568 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2569 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2570 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq32,FF),_mm256_mul_ps(vftabscale,rinv32)));
2574 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2576 /* Calculate temporary vectorial force */
2577 tx = _mm256_mul_ps(fscal,dx32);
2578 ty = _mm256_mul_ps(fscal,dy32);
2579 tz = _mm256_mul_ps(fscal,dz32);
2581 /* Update vectorial force */
2582 fix3 = _mm256_add_ps(fix3,tx);
2583 fiy3 = _mm256_add_ps(fiy3,ty);
2584 fiz3 = _mm256_add_ps(fiz3,tz);
2586 fjx2 = _mm256_add_ps(fjx2,tx);
2587 fjy2 = _mm256_add_ps(fjy2,ty);
2588 fjz2 = _mm256_add_ps(fjz2,tz);
2590 /**************************
2591 * CALCULATE INTERACTIONS *
2592 **************************/
2594 r33 = _mm256_mul_ps(rsq33,rinv33);
2595 r33 = _mm256_andnot_ps(dummy_mask,r33);
2597 /* Calculate table index by multiplying r with table scale and truncate to integer */
2598 rt = _mm256_mul_ps(r33,vftabscale);
2599 vfitab = _mm256_cvttps_epi32(rt);
2600 vfeps = _mm256_sub_ps(rt,_mm256_round_ps(rt, _MM_FROUND_FLOOR));
2601 /* AVX1 does not support 256-bit integer operations, so now we go to 128-bit mode... */
2602 vfitab_lo = _mm256_extractf128_si256(vfitab,0x0);
2603 vfitab_hi = _mm256_extractf128_si256(vfitab,0x1);
2604 vfitab_lo = _mm_slli_epi32(vfitab_lo,2);
2605 vfitab_hi = _mm_slli_epi32(vfitab_hi,2);
2607 /* CUBIC SPLINE TABLE ELECTROSTATICS */
2608 Y = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,0)),
2609 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,0)));
2610 F = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,1)),
2611 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,1)));
2612 G = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,2)),
2613 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,2)));
2614 H = gmx_mm256_set_m128(_mm_load_ps(vftab + _mm_extract_epi32(vfitab_hi,3)),
2615 _mm_load_ps(vftab + _mm_extract_epi32(vfitab_lo,3)));
2616 GMX_MM256_HALFTRANSPOSE4_PS(Y,F,G,H);
2617 Heps = _mm256_mul_ps(vfeps,H);
2618 Fp = _mm256_add_ps(F,_mm256_mul_ps(vfeps,_mm256_add_ps(G,Heps)));
2619 FF = _mm256_add_ps(Fp,_mm256_mul_ps(vfeps,_mm256_add_ps(G,_mm256_add_ps(Heps,Heps))));
2620 felec = _mm256_xor_ps(signbit,_mm256_mul_ps(_mm256_mul_ps(qq33,FF),_mm256_mul_ps(vftabscale,rinv33)));
2624 fscal = _mm256_andnot_ps(dummy_mask,fscal);
2626 /* Calculate temporary vectorial force */
2627 tx = _mm256_mul_ps(fscal,dx33);
2628 ty = _mm256_mul_ps(fscal,dy33);
2629 tz = _mm256_mul_ps(fscal,dz33);
2631 /* Update vectorial force */
2632 fix3 = _mm256_add_ps(fix3,tx);
2633 fiy3 = _mm256_add_ps(fiy3,ty);
2634 fiz3 = _mm256_add_ps(fiz3,tz);
2636 fjx3 = _mm256_add_ps(fjx3,tx);
2637 fjy3 = _mm256_add_ps(fjy3,ty);
2638 fjz3 = _mm256_add_ps(fjz3,tz);
2640 fjptrA = (jnrlistA>=0) ? f+j_coord_offsetA : scratch;
2641 fjptrB = (jnrlistB>=0) ? f+j_coord_offsetB : scratch;
2642 fjptrC = (jnrlistC>=0) ? f+j_coord_offsetC : scratch;
2643 fjptrD = (jnrlistD>=0) ? f+j_coord_offsetD : scratch;
2644 fjptrE = (jnrlistE>=0) ? f+j_coord_offsetE : scratch;
2645 fjptrF = (jnrlistF>=0) ? f+j_coord_offsetF : scratch;
2646 fjptrG = (jnrlistG>=0) ? f+j_coord_offsetG : scratch;
2647 fjptrH = (jnrlistH>=0) ? f+j_coord_offsetH : scratch;
2649 gmx_mm256_decrement_3rvec_8ptr_swizzle_ps(fjptrA+DIM,fjptrB+DIM,fjptrC+DIM,fjptrD+DIM,
2650 fjptrE+DIM,fjptrF+DIM,fjptrG+DIM,fjptrH+DIM,
2651 fjx1,fjy1,fjz1,fjx2,fjy2,fjz2,fjx3,fjy3,fjz3);
2653 /* Inner loop uses 360 flops */
2656 /* End of innermost loop */
2658 gmx_mm256_update_iforce_3atom_swizzle_ps(fix1,fiy1,fiz1,fix2,fiy2,fiz2,fix3,fiy3,fiz3,
2659 f+i_coord_offset+DIM,fshift+i_shift_offset);
2661 /* Increment number of inner iterations */
2662 inneriter += j_index_end - j_index_start;
2664 /* Outer loop uses 18 flops */
2667 /* Increment number of outer iterations */
2670 /* Update outer/inner flops */
2672 inc_nrnb(nrnb,eNR_NBKERNEL_ELEC_W4W4_F,outeriter*18 + inneriter*360);