admin/gitlab-ci/gromacs.gitlab-ci.yml

   1 # Test goal: Initial build with close-to-default settings that always needs to pass before follow-up CI stages run
   2 # Test intents (should change rarely and conservatively):
   3 #   OS: Ubuntu oldest supported
   4 #   Compiler: Clang
   5 #   Build type: Debug
   6 #   GPU: no
   7 #   SIMD: no
   8 #   Scope: configure, build, unit tests
   9 # Test implementation choices (free to change as needed):
  10 #   OS: Ubuntu 18.04
  11 #   Compiler: Clang 9
  12 #   FFT: FFTW3
  13 #   Parallelism nt/ntomp: 4/2
  14
  15 simple-build:
  16   # Test scope: configure, build, unit tests
  17   extends:
  18     - .variables:default
  19     - .use-ccache
  20     - .use-clang:base
  21     - .rules:basic-push
  22   stage: pre-build
  23   image: ${CI_REGISTRY}/gromacs/gromacs/ci-ubuntu-18.04-llvm-9
  24   variables:
  25     CMAKE: /usr/local/cmake-3.15.7/bin/cmake
  26     KUBERNETES_CPU_LIMIT: 8
  27     KUBERNETES_CPU_REQUEST: 4
  28     KUBERNETES_MEMORY_REQUEST: 8Gi
  29     CMAKE_SIMD_OPTIONS: "-DGMX_SIMD=None"
  30     CMAKE_MPI_OPTIONS: "-DGMX_THREAD_MPI=ON"
  31     CMAKE_PRECISION_OPTIONS: "-DGMX_DOUBLE=OFF"
  32     CMAKE_BUILD_TYPE_OPTIONS: "-DCMAKE_BUILD_TYPE=Debug"
  33     CMAKE_GPU_OPTIONS: "-DGMX_GPU=OFF"
  34     CMAKE_GMXAPI_OPTIONS: "-DGMX_PYTHON_PACKAGE=OFF"
  35     COMPILER_MAJOR_VERSION: 9
  36     BUILD_DIR: simple-build
  37   script:
  38     - CMAKE=${CMAKE:-$(which cmake)}
  39     - echo $CMAKE_COMPILER_SCRIPT
  40     - echo $CMAKE_EXTRA_OPTIONS
  41     - echo $CMAKE_SIMD_OPTIONS
  42     - echo $CMAKE_GPU_OPTIONS
  43     - echo $CMAKE_MPI_OPTIONS
  44     - echo $CMAKE_PRECISION_OPTIONS
  45     - echo $CMAKE_BUILD_TYPE_OPTIONS
  46     - echo $CMAKE_GMXAPI_OPTIONS
  47     - if [[ -d $BUILD_DIR ]] ; then
  48       echo "Cleaning up build directory" ;
  49       rm -rf $BUILD_DIR && mkdir $BUILD_DIR ;
  50       else
  51       echo "Preparing new build directory" ;
  52       mkdir $BUILD_DIR ;
  53       fi
  54     - cd $BUILD_DIR
  55     - $CMAKE ..
  56       -DCMAKE_C_COMPILER_LAUNCHER=ccache -DCMAKE_CXX_COMPILER_LAUNCHER=ccache
  57       $CMAKE_COMPILER_SCRIPT
  58       $CMAKE_EXTRA_OPTIONS
  59       $CMAKE_SIMD_OPTIONS
  60       $CMAKE_MPI_OPTIONS
  61       $CMAKE_PRECISION_OPTIONS
  62       $CMAKE_BUILD_TYPE_OPTIONS
  63       $CMAKE_GPU_OPTIONS
  64       $CMAKE_GMXAPI_OPTIONS
  65       -DCMAKE_INSTALL_PREFIX=../$INSTALL_DIR -DGMX_COMPILER_WARNINGS=ON
  66       2>&1 | tee cmakeLog.log
  67     - awk '/CMake Warning/,/^--|^$/' cmakeLog.log | tee cmakeErrors.log
  68     - if [ -s cmakeErrors.log  ] ; then echo "Found CMake warning while processing build"; cat cmakeErrors.log ; exit 1; fi
  69     - $CMAKE --build . -- -j$KUBERNETES_CPU_LIMIT 2>&1 | tee buildLogFile.log
  70     - $CMAKE --build . --target tests -- -j$KUBERNETES_CPU_LIMIT 2>&1 | tee testBuildLogFile.log
  71     - awk '/warning/,/warning.*generated|^$/' buildLogFile.log testBuildLogFile.log
  72       | grep -v "CMake" | tee buildErrors.log || true
  73     - grep "cannot be built" buildLogFile.log testBuildLogFile.log | tee -a buildErrors.log || true
  74     - $CMAKE --build . --target install 2>&1 | tee installBuildLogFile.log
  75     - if [ -s buildErrors.log ] ; then echo "Found compiler warning during build"; cat buildErrors.log; exit 1; fi
  76     - ctest -D ExperimentalTest --output-on-failure | tee ctestLog.log || true
  77     - awk '/The following tests FAILED/,/^Errors while running CTest|^$/'
  78       ctestLog.log | tee ctestErrors.log
  79     - xsltproc $CI_PROJECT_DIR/scripts/CTest2JUnit.xsl Testing/`head -n 1 < Testing/TAG`/Test.xml > JUnitTestResults.xml
  80     - if [ -s ctestErrors.log ] ; then
  81       echo "Error during running ctest";
  82       exit 1;
  83       fi
  84     - cd ..
  85   artifacts:
  86     reports:
  87       junit: $BUILD_DIR/JUnitTestResults.xml
  88     paths:
  89       - $BUILD_DIR/*log
  90     when: always
  91     expire_in: 1 week