1 # Packages, exported artifacts, and release engineering processes.
3 prepare-release-version:
6 - .rules:nightly-only-for-release
8 # Docker image uploaded to dockerhub by user eriklindahl
9 # TODO: Get DockerFile for admin/dockerfiles
10 image: biophysics/gcc-gromacs
11 stage: configure-build
14 KUBERNETES_CPU_LIMIT: 1
15 KUBERNETES_CPU_REQUEST: 1
16 KUBERNETES_MEMORY_LIMIT: 2Gi
18 - cmake -P cmake/gmxVersionInfo.cmake &> version.json
24 # Special job to package regressiontest files and have them available for testing
25 # Runs during pre-build
26 # Set up to only fetch the files and prepare everything for merge requests
27 regressiontests:prepare:
30 - .rules:merge-requests
32 image: biophysics/gcc-gromacs
33 stage: configure-build
36 KUBERNETES_CPU_LIMIT: 1
37 KUBERNETES_CPU_REQUEST: 1
38 KUBERNETES_MEMORY_LIMIT: 2Gi
39 # Always clone the default version for this branch, master in this case
41 - export REGTESTBRANCH=master
42 - if [[ ! -d regressiontests ]] ; then
43 mkdir regressiontests ;
49 - git fetch https://gitlab.com/gromacs/gromacs-regressiontests.git $REGTESTBRANCH
50 - git checkout -qf FETCH_HEAD
53 - git archive -o gmx-regressiontests.tar.gz --prefix regressiontests/ -9 HEAD
54 - echo "Build regressiontests for branch $REGTESTBRANCH"
55 - mv gmx-regressiontests.tar.gz ..
59 - gmx-regressiontests.tar.gz
61 regressiontests:package:
64 - .rules:nightly-only-for-release
66 # Docker image uploaded to dockerhub by user eriklindahl
67 # TODO: Get DockerFile for admin/dockerfiles
68 image: biophysics/gcc-gromacs
69 stage: release-package
72 KUBERNETES_CPU_LIMIT: 1
73 KUBERNETES_CPU_REQUEST: 1
74 KUBERNETES_MEMORY_LIMIT: 2Gi
76 - job: prepare-release-version
78 - VERSION=`cat version.json |
79 python3 -c "import json,sys; print(json.load(sys.stdin)['version'])"`
80 - REGTESTNAME="regressiontests-"$VERSION
81 - if [[ $GROMACS_RELEASE != "true" ]] ; then
82 REGTESTNAME=$REGTESTNAME-dev ;
84 - export REGTESTBRANCH=master
85 - if [[ $CI_COMMIT_REF_NAME == "master" || $CI_COMMIT_REF_NAME == "release-20"[1-2][0-9] ]] ; then
86 export REGTESTBRANCH=$CI_COMMIT_REF_NAME ;
88 - if [[ ! -d regressiontests ]] ; then
89 mkdir regressiontests ;
95 - git fetch https://gitlab.com/gromacs/gromacs-regressiontests.git $REGTESTBRANCH
96 - git checkout -qf FETCH_HEAD
99 - git archive -o $REGTESTNAME.tar.gz --prefix $REGTESTNAME/ -9 HEAD
100 - git archive -o gmx-regressiontests.tar.gz --prefix regressiontests/ -9 HEAD
101 - mv $REGTESTNAME.tar.gz gmx-regressiontests.tar.gz ..
102 - echo "Build regressiontests for branch $REGTESTBRANCH"
106 - regressiontests-*.tar.gz
107 - gmx-regressiontests.tar.gz
109 archive:configure:nightly:
112 - .rules:nightly-not-for-release
113 stage: nightly-configure
116 BUILD_DIR: build-package
117 CMAKE_SIMD_OPTIONS: -DGMX_SIMD=None
118 CMAKE_EXTRA_OPTIONS: -DGMX_BUILD_HELP=on -DGMX_USE_RDTSCP=OFF
119 CMAKE_MPI_OPTIONS: -DGMX_THREAD_MPI=OFF -DGMX_OPENMP=OFF
121 archive:configure:release:
124 - .rules:nightly-only-for-release
126 BUILD_DIR: build-package
127 CMAKE_SIMD_OPTIONS: -DGMX_SIMD=None
128 CMAKE_EXTRA_OPTIONS: -DGMX_BUILD_HELP=on -DGMX_USE_RDTSCP=OFF
129 CMAKE_MPI_OPTIONS: -DGMX_THREAD_MPI=OFF -DGMX_OPENMP=OFF
131 # Right now we need to use an ugly hack to move the original build directory
132 # and the ccache files out of the build archive, as it is not possible to use
133 # the custom build directory due to https://gitlab.com/gitlab-org/gitlab-runner/issues/4203
134 # As soon as this is resolved we should use the separate build directories instead of
135 # manually hacking things. TODO: #3361
139 - .gromacs:base:build
141 - .before_script:default
143 image: gromacs/ci-docs-llvm:master
145 KUBERNETES_CPU_LIMIT: 4
146 KUBERNETES_CPU_REQUEST: 2
147 KUBERNETES_MEMORY_LIMIT: 4Gi
149 - rm -rf gromacs*tar.gz
151 - cmake --build . --target gmx -- -j4 2>&1 | tee buildLogFile.log
152 - cmake --build . --target man -- -j4 2>&1 | tee manBuildLogFile.log
153 - cmake --build . --target completion -- -j4 2>&1 | tee completionBuildLogFile.log
154 - cmake --build . --target install-guide -- -j4 2>&1 | tee installGuideBuildLogFile.log
155 - cmake --build . --target reference_checksum -- -j4 2>&1 | tee checksumBuildLogFile.log
156 - cmake --build . --target package_source -- -j4 2>&1 | tee packageBuildLogFile.log
157 - awk '/warning/,/warning.*generated|^$/' buildLogFile.log manBuildLogFile.log
158 completionBuildLogFile.log installGuideBuildLogFile.log checksumBuildLogFile.log
159 packageBuildLogFile.log | grep -v "CMake" | tee buildErrors.log || true
160 - grep "cannot be built" buildLogFile.log manBuildLogFile.log
161 completionBuildLogFile.log installGuideBuildLogFile.log checksumBuildLogFile.log
162 packageBuildLogFile.log | tee -a buildErrors.log || true
163 - if [ -s buildErrors.log ] ; then echo "Found warnings during build"; cat buildErrors.log; exit 1; fi
164 - mv gromacs*tar.gz ..
166 # ugly hack begins here
168 - SOURCETARBALL=`ls gromacs*tar.gz`
169 - mv $SOURCETARBALL tempdir
171 - tar -xf $SOURCETARBALL
172 - rm -rf gromacs-*/$BUILD_DIR
173 - tar -c --gzip -f $SOURCETARBALL gromacs-*/
174 - mv $SOURCETARBALL ..
188 - .rules:nightly-not-for-release
191 - job: archive:configure:nightly
193 BUILD_DIR: build-package
198 - .rules:nightly-only-for-release
199 stage: release-package
201 - job: archive:configure:release
203 BUILD_DIR: build-package
206 image: biophysics/gcc-gromacs
207 stage: release-verify
210 - .rules:nightly-only-for-release
214 KUBERNETES_CPU_LIMIT: 1
215 KUBERNETES_CPU_REQUEST: 1
216 KUBERNETES_MEMORY_LIMIT: 2Gi
218 - VERSION=`cat version.json |
219 python3 -c "import json,sys; print(json.load(sys.stdin)['version'])"`
220 - if [[ $GROMACS_RELEASE != "true" ]] ; then
221 VERSION=$VERSION-dev ;
223 - REGTEST_COMPARE=`cat version.json |
224 python3 -c "import json,sys; print(json.load(sys.stdin)['regressiontest-md5sum'])"`
225 - SOURCENAME=gromacs-$VERSION
226 - SOURCETARBALL=$SOURCENAME.tar.gz
227 - SOURCE_MD5SUM=`md5sum $SOURCETARBALL | awk '{print $1}'`
228 - REGTESTNAME=regressiontests-$VERSION
229 - REGTESTTARBALL=$REGTESTNAME.tar.gz
230 - REGTEST_MD5SUM=`md5sum $REGTESTTARBALL | awk '{print $1}'`
231 - echo "$SOURCETARBALL md5sum = $SOURCE_MD5SUM"
232 - echo "$REGTESTTARBALL md5sum = $REGTEST_MD5SUM"
233 - echo "$REGTESTTARBALL reference md5sum = $REGTEST_COMPARE"
234 - if [[ $REGTEST_COMPARE != $REGTEST_MD5SUM && $GROMACS_RELEASE == "true" ]] ; then
235 echo "Mismatch in regressiontest md5sums";
240 - regressiontests:package
241 - prepare-release-version
243 archive:nightly-webpage:
246 - .rules:nightly-not-for-release
247 stage: nightly-deploy
253 BUILD_DIR: build-docs
255 - tar czf webpage.tar.gz $BUILD_DIR/docs/html/
261 archive:full-release:
264 - .rules:nightly-only-for-release
265 stage: release-deploy
267 - webpage:build:release
269 - regressiontests:package
271 BUILD_DIR: release-doc-builds
273 - tar czf webpage.tar.gz $BUILD_DIR/docs/html/
279 - regressiontests-*tar.gz